RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 NPM1P06748 294 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNHG1-207ENST00000537965 EVX2Q03828 476 aa10.81□□□□□ -0.68
SNHG1-207ENST00000537965 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
SNHG1-207ENST00000537965 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
SNHG1-207ENST00000537965 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
SNHG1-207ENST00000537965 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
SNHG1-207ENST00000537965 ZRANB1Q9UGI0 708 aa10.68□□□□□ -0.7
SNHG1-207ENST00000537965 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
SNHG1-207ENST00000537965 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
SNHG1-207ENST00000537965 NUBP1P53384 320 aa10.64□□□□□ -0.71
SNHG1-207ENST00000537965 KLHL34Q8N239 644 aa10.64□□□□□ -0.71
SNHG1-207ENST00000537965 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
SNHG1-207ENST00000537965 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
SNHG1-207ENST00000537965 RASEFQ8IZ41 740 aa10.63□□□□□ -0.71
SNHG1-207ENST00000537965 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
SNHG1-207ENST00000537965 GABBR2O75899 941 aa10.6□□□□□ -0.71
SNHG1-207ENST00000537965 CLCN6P51797 869 aa10.6□□□□□ -0.71
SNHG1-207ENST00000537965 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
SNHG1-207ENST00000537965 FAM212AQ96EL1 285 aa10.55□□□□□ -0.72
SNHG1-207ENST00000537965 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
SNHG1-207ENST00000537965 SPOCK2Q92563 424 aa10.54□□□□□ -0.72
SNHG1-207ENST00000537965 CUX2O14529 1486 aa10.54□□□□□ -0.72
SNHG1-207ENST00000537965 NCAPD3P42695 1498 aa10.51□□□□□ -0.73
SNHG1-207ENST00000537965 DCAF8Q5TAQ9 597 aa10.5□□□□□ -0.73
SNHG1-207ENST00000537965 ERCC6Q03468 1493 aa10.49□□□□□ -0.73
SNHG1-207ENST00000537965 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
SNHG1-207ENST00000537965 GALR2O43603 387 aaPredicted RBP10.47□□□□□ -0.73
SNHG1-207ENST00000537965 GSE1Q14687 1217 aa10.47□□□□□ -0.73
SNHG1-207ENST00000537965 SMARCA2P51531 1590 aa10.47□□□□□ -0.73
SNHG1-207ENST00000537965 ATAD2BQ9ULI0 1458 aa10.44□□□□□ -0.74
SNHG1-207ENST00000537965 HMGXB3Q12766 1538 aa10.43□□□□□ -0.74
SNHG1-207ENST00000537965 MAP3K13O43283 966 aa10.43□□□□□ -0.74
SNHG1-207ENST00000537965 MS4A3Q96HJ5 214 aa10.43□□□□□ -0.74
SNHG1-207ENST00000537965 SMARCA4P51532 1647 aa10.42□□□□□ -0.74
SNHG1-207ENST00000537965 SGIP1Q9BQI5 828 aa10.41□□□□□ -0.74
SNHG1-207ENST00000537965 PYGBP11216 843 aa10.39□□□□□ -0.75
SNHG1-207ENST00000537965 CIZ1Q9ULV3 898 aaPredicted RBP10.39□□□□□ -0.75
SNHG1-207ENST00000537965 POTEIP0CG38 1075 aa10.38□□□□□ -0.75
SNHG1-207ENST00000537965 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
SNHG1-207ENST00000537965 BAZ1AQ9NRL2 1556 aaPredicted RBP10.38□□□□□ -0.75
SNHG1-207ENST00000537965 CHRM1P11229 460 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-207ENST00000537965 PCDHB13Q9Y5F0 798 aa10.37□□□□□ -0.75
SNHG1-207ENST00000537965 BAZ1BQ9UIG0 1483 aaKnown RBP10.36□□□□□ -0.75
SNHG1-207ENST00000537965 LAMC3Q9Y6N6 1575 aa10.34□□□□□ -0.75
SNHG1-207ENST00000537965 IFNL1Q8IU54 200 aa10.33□□□□□ -0.76
SNHG1-207ENST00000537965 PEG3Q9GZU2 1588 aa10.33□□□□□ -0.76
SNHG1-207ENST00000537965 NESP48681 1621 aa10.33□□□□□ -0.76
SNHG1-207ENST00000537965 TRIM41Q8WV44 630 aa10.31□□□□□ -0.76
SNHG1-207ENST00000537965 ASTLQ6HA08 431 aaPredicted RBP10.3□□□□□ -0.76
SNHG1-207ENST00000537965 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
SNHG1-207ENST00000537965 THOC2Q8NI27 1593 aaKnown RBP10.28□□□□□ -0.76
SNHG1-207ENST00000537965 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
SNHG1-207ENST00000537965 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-207ENST00000537965 TIE1P35590 1138 aa10.28□□□□□ -0.76
SNHG1-207ENST00000537965 ZNF467Q7Z7K2 595 aaPredicted RBP10.27□□□□□ -0.77
SNHG1-207ENST00000537965 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
SNHG1-207ENST00000537965 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
SNHG1-207ENST00000537965 KIF21AQ7Z4S6 1674 aa10.26□□□□□ -0.77
SNHG1-207ENST00000537965 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
SNHG1-207ENST00000537965 TTLL13PA6NNM8 815 aa10.23□□□□□ -0.77
SNHG1-207ENST00000537965 ATN1P54259 1190 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-207ENST00000537965 MROH2BQ7Z745 1585 aa10.22□□□□□ -0.77
SNHG1-207ENST00000537965 PKD2Q13563 968 aa10.2□□□□□ -0.78
SNHG1-207ENST00000537965 TMEM106CQ9BVX2 250 aa10.2□□□□□ -0.78
SNHG1-207ENST00000537965 CADPSQ9ULU8 1353 aa10.19□□□□□ -0.78
SNHG1-207ENST00000537965 SLC39A7Q92504 469 aa10.17□□□□□ -0.78
SNHG1-207ENST00000537965 C7P10643 843 aa10.16□□□□□ -0.78
SNHG1-207ENST00000537965 PSEN1P49768 467 aa10.16□□□□□ -0.78
SNHG1-207ENST00000537965 PDAP1Q13442 181 aaKnown RBP10.16□□□□□ -0.78
SNHG1-207ENST00000537965 TRIM35Q9UPQ4 493 aa10.16□□□□□ -0.78
SNHG1-207ENST00000537965 MRC2Q9UBG0 1479 aa10.16□□□□□ -0.78
SNHG1-207ENST00000537965 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
SNHG1-207ENST00000537965 RNF25Q96BH1 459 aaPredicted RBP10.15□□□□□ -0.78
SNHG1-207ENST00000537965 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
SNHG1-207ENST00000537965 METRNQ9UJH8 293 aa10.14□□□□□ -0.79
SNHG1-207ENST00000537965 WDR62O43379 1518 aa10.12□□□□□ -0.79
SNHG1-207ENST00000537965 WIZO95785 1651 aa10.12□□□□□ -0.79
SNHG1-207ENST00000537965 IER5LQ5T953 404 aa10.11□□□□□ -0.79
SNHG1-207ENST00000537965 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
SNHG1-207ENST00000537965 LHX8Q68G74 356 aa10.1□□□□□ -0.79
SNHG1-207ENST00000537965 VGFO15240 615 aaPredicted RBP10.08□□□□□ -0.8
SNHG1-207ENST00000537965 RGL2O15211 777 aa10.07□□□□□ -0.8
SNHG1-207ENST00000537965 FANCD2Q9BXW9 1451 aa10.06□□□□□ -0.8
SNHG1-207ENST00000537965 POTEFA5A3E0 1075 aa10.06□□□□□ -0.8
SNHG1-207ENST00000537965 TAOK2Q9UL54 1235 aa10.05□□□□□ -0.8
SNHG1-207ENST00000537965 POTEB2H3BUK9 544 aa10.04□□□□□ -0.8
SNHG1-207ENST00000537965 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
SNHG1-207ENST00000537965 PRDM2Q13029 1718 aa10.04□□□□□ -0.8
SNHG1-207ENST00000537965 CFTRP13569 1480 aa10.04□□□□□ -0.8
SNHG1-207ENST00000537965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-207ENST00000537965 SEC24BO95487 1268 aa10.03□□□□□ -0.8
SNHG1-207ENST00000537965 IRX5P78411 483 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-207ENST00000537965 GOLGA2Q08379 1002 aa10.03□□□□□ -0.8
SNHG1-207ENST00000537965 ZFP91Q96JP5 570 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-207ENST00000537965 MKRN3Q13064 507 aaKnown RBP10.02□□□□□ -0.81
SNHG1-207ENST00000537965 CABP2Q9NPB3 220 aa10.02□□□□□ -0.81
SNHG1-207ENST00000537965 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
SNHG1-207ENST00000537965 PLCG2P16885 1265 aa9.99□□□□□ -0.81
SNHG1-207ENST00000537965 OCEL1Q9H607 264 aa9.99□□□□□ -0.81
SNHG1-207ENST00000537965 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms