RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
LINC02398-201ENST00000536666 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
LINC02398-201ENST00000536666 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
LINC02398-201ENST00000536666 KIF12Q96FN5 646 aa13.49□□□□□ -0.25
LINC02398-201ENST00000536666 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
LINC02398-201ENST00000536666 MAP3K13O43283 966 aa13.43□□□□□ -0.26
LINC02398-201ENST00000536666 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
LINC02398-201ENST00000536666 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
LINC02398-201ENST00000536666 FAM212AQ96EL1 285 aa13.43□□□□□ -0.26
LINC02398-201ENST00000536666 NUBP1P53384 320 aa13.42□□□□□ -0.26
LINC02398-201ENST00000536666 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
LINC02398-201ENST00000536666 C7P10643 843 aa13.39□□□□□ -0.27
LINC02398-201ENST00000536666 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
LINC02398-201ENST00000536666 ATN1P54259 1190 aaPredicted RBP13.35□□□□□ -0.27
LINC02398-201ENST00000536666 PCDHB13Q9Y5F0 798 aa13.35□□□□□ -0.27
LINC02398-201ENST00000536666 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
LINC02398-201ENST00000536666 TIE1P35590 1138 aa13.33□□□□□ -0.28
LINC02398-201ENST00000536666 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
LINC02398-201ENST00000536666 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
LINC02398-201ENST00000536666 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
LINC02398-201ENST00000536666 POTEB2H3BUK9 544 aa13.31□□□□□ -0.28
LINC02398-201ENST00000536666 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
LINC02398-201ENST00000536666 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
LINC02398-201ENST00000536666 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
LINC02398-201ENST00000536666 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
LINC02398-201ENST00000536666 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
LINC02398-201ENST00000536666 IFNL1Q8IU54 200 aa13.23□□□□□ -0.29
LINC02398-201ENST00000536666 SEC24BO95487 1268 aa13.21□□□□□ -0.29
LINC02398-201ENST00000536666 PYGBP11216 843 aa13.21□□□□□ -0.29
LINC02398-201ENST00000536666 GSE1Q14687 1217 aa13.18□□□□□ -0.3
LINC02398-201ENST00000536666 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
LINC02398-201ENST00000536666 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
LINC02398-201ENST00000536666 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
LINC02398-201ENST00000536666 IER5LQ5T953 404 aa13.14□□□□□ -0.31
LINC02398-201ENST00000536666 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
LINC02398-201ENST00000536666 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
LINC02398-201ENST00000536666 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
LINC02398-201ENST00000536666 COLQQ9Y215 455 aaPredicted RBP13.08□□□□□ -0.32
LINC02398-201ENST00000536666 SPOCK2Q92563 424 aa13.06□□□□□ -0.32
LINC02398-201ENST00000536666 ZNF467Q7Z7K2 595 aaPredicted RBP13.05□□□□□ -0.32
LINC02398-201ENST00000536666 PLCG2P16885 1265 aa13.04□□□□□ -0.32
LINC02398-201ENST00000536666 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
LINC02398-201ENST00000536666 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
LINC02398-201ENST00000536666 CHRM1P11229 460 aaPredicted RBP13□□□□□ -0.33
LINC02398-201ENST00000536666 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
LINC02398-201ENST00000536666 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
LINC02398-201ENST00000536666 OCEL1Q9H607 264 aa12.94□□□□□ -0.34
LINC02398-201ENST00000536666 POTEMA6NI47 508 aa12.93□□□□□ -0.34
LINC02398-201ENST00000536666 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
LINC02398-201ENST00000536666 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
LINC02398-201ENST00000536666 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
LINC02398-201ENST00000536666 PSEN1P49768 467 aa12.9□□□□□ -0.34
LINC02398-201ENST00000536666 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
LINC02398-201ENST00000536666 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
LINC02398-201ENST00000536666 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
LINC02398-201ENST00000536666 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
LINC02398-201ENST00000536666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC02398-201ENST00000536666 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.8□□□□□ -0.36
LINC02398-201ENST00000536666 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
LINC02398-201ENST00000536666 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
LINC02398-201ENST00000536666 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
LINC02398-201ENST00000536666 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
LINC02398-201ENST00000536666 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
LINC02398-201ENST00000536666 PDCD7Q8N8D1 485 aaKnown RBP12.75□□□□□ -0.37
LINC02398-201ENST00000536666 SNPHO15079 494 aa12.7□□□□□ -0.38
LINC02398-201ENST00000536666 G3V3G9 751 aa12.69□□□□□ -0.38
LINC02398-201ENST00000536666 ST18O60284 1047 aa12.66□□□□□ -0.38
LINC02398-201ENST00000536666 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
LINC02398-201ENST00000536666 ILDR1Q86SU0 546 aaPredicted RBP12.62□□□□□ -0.39
LINC02398-201ENST00000536666 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
LINC02398-201ENST00000536666 EFCAB3Q8N7B9 438 aa12.59□□□□□ -0.39
LINC02398-201ENST00000536666 BOLA1Q9Y3E2 137 aa12.59□□□□□ -0.39
LINC02398-201ENST00000536666 TMEM121BQ9BXQ6 578 aaPredicted RBP12.58□□□□□ -0.4
LINC02398-201ENST00000536666 VGFO15240 615 aaPredicted RBP12.57□□□□□ -0.4
LINC02398-201ENST00000536666 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
LINC02398-201ENST00000536666 CDAN1Q8IWY9 1227 aa12.55□□□□□ -0.4
LINC02398-201ENST00000536666 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
LINC02398-201ENST00000536666 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
LINC02398-201ENST00000536666 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
LINC02398-201ENST00000536666 SOX12O15370 315 aa12.5□□□□□ -0.41
LINC02398-201ENST00000536666 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
LINC02398-201ENST00000536666 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
LINC02398-201ENST00000536666 EMP3P54852 163 aa12.43□□□□□ -0.42
LINC02398-201ENST00000536666 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
LINC02398-201ENST00000536666 PHF8Q9UPP1 1060 aa12.41□□□□□ -0.42
LINC02398-201ENST00000536666 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
LINC02398-201ENST00000536666 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
LINC02398-201ENST00000536666 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
LINC02398-201ENST00000536666 STK25O00506 426 aa12.38□□□□□ -0.43
LINC02398-201ENST00000536666 NLRP6P59044 892 aa12.38□□□□□ -0.43
LINC02398-201ENST00000536666 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
LINC02398-201ENST00000536666 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
LINC02398-201ENST00000536666 RIMBP2O15034 1052 aa12.34□□□□□ -0.43
LINC02398-201ENST00000536666 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
LINC02398-201ENST00000536666 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
LINC02398-201ENST00000536666 PKD2Q13563 968 aa12.32□□□□□ -0.44
LINC02398-201ENST00000536666 HS3ST6Q96QI5 342 aa12.3□□□□□ -0.44
LINC02398-201ENST00000536666 RGL2O15211 777 aa12.29□□□□□ -0.44
LINC02398-201ENST00000536666 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
LINC02398-201ENST00000536666 TMEM92Q6UXU6 159 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms