RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
KNTC1-209ENST00000536625 POTEJP0CG39 1038 aa13.81□□□□□ -0.2
KNTC1-209ENST00000536625 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
KNTC1-209ENST00000536625 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
KNTC1-209ENST00000536625 SLC39A7Q92504 469 aa13.74□□□□□ -0.21
KNTC1-209ENST00000536625 C7P10643 843 aa13.73□□□□□ -0.21
KNTC1-209ENST00000536625 POTEMA6NI47 508 aa13.72□□□□□ -0.21
KNTC1-209ENST00000536625 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
KNTC1-209ENST00000536625 KIF12Q96FN5 646 aa13.71□□□□□ -0.21
KNTC1-209ENST00000536625 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
KNTC1-209ENST00000536625 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
KNTC1-209ENST00000536625 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
KNTC1-209ENST00000536625 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
KNTC1-209ENST00000536625 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
KNTC1-209ENST00000536625 MAP3K13O43283 966 aa13.63□□□□□ -0.23
KNTC1-209ENST00000536625 MIER1Q8N108 512 aa13.61□□□□□ -0.23
KNTC1-209ENST00000536625 LCE2DQ5TA82 110 aaPredicted RBP13.58□□□□□ -0.24
KNTC1-209ENST00000536625 MAMSTRQ6ZN01 415 aa13.57□□□□□ -0.24
KNTC1-209ENST00000536625 TIE1P35590 1138 aa13.53□□□□□ -0.24
KNTC1-209ENST00000536625 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
KNTC1-209ENST00000536625 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
KNTC1-209ENST00000536625 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
KNTC1-209ENST00000536625 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
KNTC1-209ENST00000536625 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
KNTC1-209ENST00000536625 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
KNTC1-209ENST00000536625 NUBP1P53384 320 aa13.44□□□□□ -0.26
KNTC1-209ENST00000536625 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
KNTC1-209ENST00000536625 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
KNTC1-209ENST00000536625 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
KNTC1-209ENST00000536625 SEC24BO95487 1268 aa13.38□□□□□ -0.27
KNTC1-209ENST00000536625 IFNL1Q8IU54 200 aa13.37□□□□□ -0.27
KNTC1-209ENST00000536625 SGIP1Q9BQI5 828 aa13.37□□□□□ -0.27
KNTC1-209ENST00000536625 IER5LQ5T953 404 aa13.33□□□□□ -0.28
KNTC1-209ENST00000536625 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
KNTC1-209ENST00000536625 TMEM106CQ9BVX2 250 aa13.28□□□□□ -0.28
KNTC1-209ENST00000536625 FAM212AQ96EL1 285 aa13.27□□□□□ -0.29
KNTC1-209ENST00000536625 FKBP8Q14318 412 aa13.26□□□□□ -0.29
KNTC1-209ENST00000536625 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
KNTC1-209ENST00000536625 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
KNTC1-209ENST00000536625 PLCG2P16885 1265 aa13.18□□□□□ -0.3
KNTC1-209ENST00000536625 PYGBP11216 843 aa13.17□□□□□ -0.3
KNTC1-209ENST00000536625 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
KNTC1-209ENST00000536625 ST18O60284 1047 aa13.16□□□□□ -0.3
KNTC1-209ENST00000536625 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
KNTC1-209ENST00000536625 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
KNTC1-209ENST00000536625 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
KNTC1-209ENST00000536625 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
KNTC1-209ENST00000536625 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
KNTC1-209ENST00000536625 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
KNTC1-209ENST00000536625 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
KNTC1-209ENST00000536625 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
KNTC1-209ENST00000536625 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
KNTC1-209ENST00000536625 ZNF467Q7Z7K2 595 aaPredicted RBP12.9□□□□□ -0.34
KNTC1-209ENST00000536625 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
KNTC1-209ENST00000536625 SNPHO15079 494 aa12.89□□□□□ -0.35
KNTC1-209ENST00000536625 GSE1Q14687 1217 aa12.89□□□□□ -0.35
KNTC1-209ENST00000536625 SPNS2Q8IVW8 549 aa12.87□□□□□ -0.35
KNTC1-209ENST00000536625 CHRM1P11229 460 aaPredicted RBP12.86□□□□□ -0.35
KNTC1-209ENST00000536625 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
KNTC1-209ENST00000536625 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
KNTC1-209ENST00000536625 PSEN1P49768 467 aa12.85□□□□□ -0.35
KNTC1-209ENST00000536625 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
KNTC1-209ENST00000536625 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
KNTC1-209ENST00000536625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
KNTC1-209ENST00000536625 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
KNTC1-209ENST00000536625 POTEB3A0JP26 581 aa12.79□□□□□ -0.36
KNTC1-209ENST00000536625 POTEBQ6S5H4 581 aa12.79□□□□□ -0.36
KNTC1-209ENST00000536625 ILDR1Q86SU0 546 aaPredicted RBP12.79□□□□□ -0.36
KNTC1-209ENST00000536625 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
KNTC1-209ENST00000536625 EMP3P54852 163 aa12.76□□□□□ -0.37
KNTC1-209ENST00000536625 PDAP1Q13442 181 aaKnown RBP12.73□□□□□ -0.37
KNTC1-209ENST00000536625 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.37
KNTC1-209ENST00000536625 KRTAP3-3Q9BYR6 98 aa12.71□□□□□ -0.37
KNTC1-209ENST00000536625 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
KNTC1-209ENST00000536625 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
KNTC1-209ENST00000536625 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
KNTC1-209ENST00000536625 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
KNTC1-209ENST00000536625 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
KNTC1-209ENST00000536625 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
KNTC1-209ENST00000536625 HOXB3P14651 431 aaPredicted RBP12.65□□□□□ -0.38
KNTC1-209ENST00000536625 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
KNTC1-209ENST00000536625 G3V3G9 751 aa12.55□□□□□ -0.4
KNTC1-209ENST00000536625 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
KNTC1-209ENST00000536625 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
KNTC1-209ENST00000536625 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
KNTC1-209ENST00000536625 TMEM92Q6UXU6 159 aa12.48□□□□□ -0.41
KNTC1-209ENST00000536625 DOK7Q18PE1 504 aa12.46□□□□□ -0.41
KNTC1-209ENST00000536625 ERBB3P21860 1342 aa12.45□□□□□ -0.42
KNTC1-209ENST00000536625 MICALL2Q8IY33 904 aa12.43□□□□□ -0.42
KNTC1-209ENST00000536625 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
KNTC1-209ENST00000536625 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
KNTC1-209ENST00000536625 RNF25Q96BH1 459 aaPredicted RBP12.4□□□□□ -0.42
KNTC1-209ENST00000536625 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
KNTC1-209ENST00000536625 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
KNTC1-209ENST00000536625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
KNTC1-209ENST00000536625 GPR153Q6NV75 609 aa12.34□□□□□ -0.43
KNTC1-209ENST00000536625 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
KNTC1-209ENST00000536625 PHF8Q9UPP1 1060 aa12.34□□□□□ -0.43
KNTC1-209ENST00000536625 RIOK3O14730 519 aaKnown RBP12.33□□□□□ -0.44
KNTC1-209ENST00000536625 SOX12O15370 315 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms