RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
VBP1-203ENST00000535916 RASEFQ8IZ41 740 aa16.34■□□□□ 0.21
VBP1-203ENST00000535916 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
VBP1-203ENST00000535916 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
VBP1-203ENST00000535916 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
VBP1-203ENST00000535916 POTEGQ6S5H5 508 aa16.27■□□□□ 0.2
VBP1-203ENST00000535916 MS4A3Q96HJ5 214 aa16.25■□□□□ 0.19
VBP1-203ENST00000535916 NUBP1P53384 320 aa16.24■□□□□ 0.19
VBP1-203ENST00000535916 VASPP50552 380 aaPredicted RBP16.2■□□□□ 0.18
VBP1-203ENST00000535916 KIF12Q96FN5 646 aa16.19■□□□□ 0.18
VBP1-203ENST00000535916 PCDH10Q9P2E7 1040 aa16.17■□□□□ 0.18
VBP1-203ENST00000535916 MAP3K13O43283 966 aa16.12■□□□□ 0.17
VBP1-203ENST00000535916 FAM212AQ96EL1 285 aa16.1■□□□□ 0.17
VBP1-203ENST00000535916 POTEB2H3BUK9 544 aa16.09■□□□□ 0.17
VBP1-203ENST00000535916 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
VBP1-203ENST00000535916 KLHL34Q8N239 644 aa16.06■□□□□ 0.16
VBP1-203ENST00000535916 ATMINO43313 823 aaPredicted RBP16.04■□□□□ 0.16
VBP1-203ENST00000535916 ASTLQ6HA08 431 aaPredicted RBP16.04■□□□□ 0.16
VBP1-203ENST00000535916 TRPC6Q9Y210 931 aa16.04■□□□□ 0.16
VBP1-203ENST00000535916 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
VBP1-203ENST00000535916 PCDHB13Q9Y5F0 798 aa15.97■□□□□ 0.15
VBP1-203ENST00000535916 BMP2KQ9NSY1 1161 aaPredicted RBP15.96■□□□□ 0.15
VBP1-203ENST00000535916 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
VBP1-203ENST00000535916 IFNLR1Q8IU57 520 aaPredicted RBP15.95■□□□□ 0.14
VBP1-203ENST00000535916 SGIP1Q9BQI5 828 aa15.94■□□□□ 0.14
VBP1-203ENST00000535916 TIE1P35590 1138 aa15.92■□□□□ 0.14
VBP1-203ENST00000535916 PYGBP11216 843 aa15.91■□□□□ 0.14
VBP1-203ENST00000535916 IFNL1Q8IU54 200 aa15.91■□□□□ 0.14
VBP1-203ENST00000535916 METRNQ9UJH8 293 aa15.91■□□□□ 0.14
VBP1-203ENST00000535916 SLC39A7Q92504 469 aa15.89■□□□□ 0.13
VBP1-203ENST00000535916 TTLL13PA6NNM8 815 aa15.86■□□□□ 0.13
VBP1-203ENST00000535916 C7P10643 843 aa15.86■□□□□ 0.13
VBP1-203ENST00000535916 GSE1Q14687 1217 aa15.85■□□□□ 0.13
VBP1-203ENST00000535916 SPOCK2Q92563 424 aa15.84■□□□□ 0.13
VBP1-203ENST00000535916 MAMSTRQ6ZN01 415 aa15.79■□□□□ 0.12
VBP1-203ENST00000535916 PCDHB8Q9UN66 801 aa15.77■□□□□ 0.12
VBP1-203ENST00000535916 TMEM106CQ9BVX2 250 aa15.76■□□□□ 0.11
VBP1-203ENST00000535916 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
VBP1-203ENST00000535916 FAM163AQ96GL9 167 aaPredicted RBP15.74■□□□□ 0.11
VBP1-203ENST00000535916 POTEFA5A3E0 1075 aa15.73■□□□□ 0.11
VBP1-203ENST00000535916 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
VBP1-203ENST00000535916 LCE2DQ5TA82 110 aaPredicted RBP15.71■□□□□ 0.11
VBP1-203ENST00000535916 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
VBP1-203ENST00000535916 CHRM1P11229 460 aaPredicted RBP15.69■□□□□ 0.1
VBP1-203ENST00000535916 COLQQ9Y215 455 aaPredicted RBP15.67■□□□□ 0.1
VBP1-203ENST00000535916 IER5LQ5T953 404 aa15.65■□□□□ 0.1
VBP1-203ENST00000535916 ZNF467Q7Z7K2 595 aaPredicted RBP15.65■□□□□ 0.1
VBP1-203ENST00000535916 SCUBE2Q9NQ36 999 aa15.65■□□□□ 0.1
VBP1-203ENST00000535916 SEC24BO95487 1268 aa15.63■□□□□ 0.09
VBP1-203ENST00000535916 PSEN1P49768 467 aa15.53■□□□□ 0.08
VBP1-203ENST00000535916 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.08
VBP1-203ENST00000535916 PLCG2P16885 1265 aa15.5■□□□□ 0.07
VBP1-203ENST00000535916 CDAN1Q8IWY9 1227 aa15.49■□□□□ 0.07
VBP1-203ENST00000535916 PDAP1Q13442 181 aaKnown RBP15.48■□□□□ 0.07
VBP1-203ENST00000535916 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
VBP1-203ENST00000535916 OCEL1Q9H607 264 aa15.44■□□□□ 0.06
VBP1-203ENST00000535916 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
VBP1-203ENST00000535916 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
VBP1-203ENST00000535916 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
VBP1-203ENST00000535916 PDCD7Q8N8D1 485 aaKnown RBP15.35■□□□□ 0.05
VBP1-203ENST00000535916 RNF25Q96BH1 459 aaPredicted RBP15.34■□□□□ 0.05
VBP1-203ENST00000535916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.04
VBP1-203ENST00000535916 RIOK3O14730 519 aaKnown RBP15.29■□□□□ 0.04
VBP1-203ENST00000535916 SLAIN1Q8ND83 568 aa15.27■□□□□ 0.04
VBP1-203ENST00000535916 ILDR1Q86SU0 546 aaPredicted RBP15.24■□□□□ 0.03
VBP1-203ENST00000535916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.22■□□□□ 0.03
VBP1-203ENST00000535916 ZFP91Q96JP5 570 aaPredicted RBP15.22■□□□□ 0.03
VBP1-203ENST00000535916 VGFO15240 615 aaPredicted RBP15.21■□□□□ 0.03
VBP1-203ENST00000535916 DPY19L2Q6NUT2 758 aa15.2■□□□□ 0.02
VBP1-203ENST00000535916 EFCAB3Q8N7B9 438 aa15.2■□□□□ 0.02
VBP1-203ENST00000535916 MMRN1Q13201 1228 aa15.19■□□□□ 0.02
VBP1-203ENST00000535916 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
VBP1-203ENST00000535916 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
VBP1-203ENST00000535916 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
VBP1-203ENST00000535916 PKD2Q13563 968 aa15.17■□□□□ 0.02
VBP1-203ENST00000535916 C3orf67Q6ZVT6 689 aa15.13■□□□□ 0.01
VBP1-203ENST00000535916 ST18O60284 1047 aa15.12■□□□□ 0.01
VBP1-203ENST00000535916 SPNS2Q8IVW8 549 aa15.11■□□□□ 0.01
VBP1-203ENST00000535916 RGL2O15211 777 aa15.07■□□□□ 0
VBP1-203ENST00000535916 BOLA1Q9Y3E2 137 aa15.07■□□□□ 0
VBP1-203ENST00000535916 BCL11BQ9C0K0 894 aaPredicted RBP15.06■□□□□ 0
VBP1-203ENST00000535916 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
VBP1-203ENST00000535916 G3V3G9 751 aa15.04■□□□□ -0
VBP1-203ENST00000535916 SOX12O15370 315 aa15.03■□□□□ -0
VBP1-203ENST00000535916 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
VBP1-203ENST00000535916 STK24Q9Y6E0 443 aa15.02■□□□□ -0
VBP1-203ENST00000535916 MS4A4AQ96JQ5 239 aa15□□□□□ -0.01
VBP1-203ENST00000535916 STK25O00506 426 aa14.99□□□□□ -0.01
VBP1-203ENST00000535916 TMEM121BQ9BXQ6 578 aaPredicted RBP14.97□□□□□ -0.01
VBP1-203ENST00000535916 SNPHO15079 494 aa14.96□□□□□ -0.01
VBP1-203ENST00000535916 MICALL2Q8IY33 904 aa14.92□□□□□ -0.02
VBP1-203ENST00000535916 NLRP6P59044 892 aa14.9□□□□□ -0.02
VBP1-203ENST00000535916 FBXO22Q8NEZ5 403 aa14.9□□□□□ -0.02
VBP1-203ENST00000535916 MFRPQ9BY79 579 aa14.88□□□□□ -0.03
VBP1-203ENST00000535916 TMEM92Q6UXU6 159 aa14.83□□□□□ -0.04
VBP1-203ENST00000535916 MARVELD3Q96A59 401 aa14.82□□□□□ -0.04
VBP1-203ENST00000535916 HOXB3P14651 431 aaPredicted RBP14.79□□□□□ -0.04
VBP1-203ENST00000535916 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
VBP1-203ENST00000535916 EMP3P54852 163 aa14.72□□□□□ -0.05
VBP1-203ENST00000535916 DOK7Q18PE1 504 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms