RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
GOPC-203ENST00000535237 DEKP35659 375 aaKnown RBP20.01■□□□□ 0.79
GOPC-203ENST00000535237 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
GOPC-203ENST00000535237 LAS1LQ9Y4W2 734 aaKnown RBP19.99■□□□□ 0.79
GOPC-203ENST00000535237 B4GALNT3Q6L9W6 998 aa19.98■□□□□ 0.79
GOPC-203ENST00000535237 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.97■□□□□ 0.79
GOPC-203ENST00000535237 DDRGK1Q96HY6 314 aa19.94■□□□□ 0.78
GOPC-203ENST00000535237 SIN3AQ96ST3 1273 aa19.94■□□□□ 0.78
GOPC-203ENST00000535237 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
GOPC-203ENST00000535237 PPM1GO15355 546 aaPredicted RBP19.93■□□□□ 0.78
GOPC-203ENST00000535237 TNIKQ9UKE5 1360 aa19.9■□□□□ 0.78
GOPC-203ENST00000535237 KDM2AQ9Y2K7 1162 aa19.86■□□□□ 0.77
GOPC-203ENST00000535237 GOLGA3Q08378 1498 aa19.86■□□□□ 0.77
GOPC-203ENST00000535237 ERICH6BQ5W0A0 696 aa19.86■□□□□ 0.77
GOPC-203ENST00000535237 WDR43Q15061 677 aaKnown RBP eCLIP19.85■□□□□ 0.77
GOPC-203ENST00000535237 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
GOPC-203ENST00000535237 RRP7BPQ9NSQ0 103 aa19.83■□□□□ 0.77
GOPC-203ENST00000535237 EEA1Q15075 1411 aa19.82■□□□□ 0.76
GOPC-203ENST00000535237 SLC24A1O60721 1099 aa19.8■□□□□ 0.76
GOPC-203ENST00000535237 BECN1Q14457 450 aa19.8■□□□□ 0.76
GOPC-203ENST00000535237 MTUS2Q5JR59 1369 aa19.8■□□□□ 0.76
GOPC-203ENST00000535237 TRIM44Q96DX7 344 aaPredicted RBP19.79■□□□□ 0.76
GOPC-203ENST00000535237 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
GOPC-203ENST00000535237 ESF1Q9H501 851 aaKnown RBP19.76■□□□□ 0.75
GOPC-203ENST00000535237 CCER2I3L3R5 266 aa19.75■□□□□ 0.75
GOPC-203ENST00000535237 NAP1L5Q96NT1 182 aaPredicted RBP19.72■□□□□ 0.75
GOPC-203ENST00000535237 TRHP20396 242 aaPredicted RBP19.69■□□□□ 0.74
GOPC-203ENST00000535237 RGS3P49796 1198 aa19.69■□□□□ 0.74
GOPC-203ENST00000535237 CECR2Q9BXF3 1484 aa19.66■□□□□ 0.74
GOPC-203ENST00000535237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.744e-8■■■■□ 21.9
GOPC-203ENST00000535237 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.65■□□□□ 0.74
GOPC-203ENST00000535237 CHGAP10645 457 aaKnown RBP19.62■□□□□ 0.73
GOPC-203ENST00000535237 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
GOPC-203ENST00000535237 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
GOPC-203ENST00000535237 CCNB3Q8WWL7 1395 aa19.61■□□□□ 0.73
GOPC-203ENST00000535237 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
GOPC-203ENST00000535237 TSPY4P0CV99 314 aa19.58■□□□□ 0.72
GOPC-203ENST00000535237 TSPY10P0CW01 314 aa19.58■□□□□ 0.72
GOPC-203ENST00000535237 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.72
GOPC-203ENST00000535237 GOLGA6L22H0YM25 854 aa19.57■□□□□ 0.72
GOPC-203ENST00000535237 SOGA1O94964 1423 aa19.56■□□□□ 0.72
GOPC-203ENST00000535237 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
GOPC-203ENST00000535237 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
GOPC-203ENST00000535237 RGL3Q3MIN7 710 aa19.53■□□□□ 0.72
GOPC-203ENST00000535237 IPO9Q96P70 1041 aaKnown RBP19.51■□□□□ 0.71
GOPC-203ENST00000535237 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
GOPC-203ENST00000535237 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
GOPC-203ENST00000535237 HSPA5P11021 654 aaKnown RBP19.48■□□□□ 0.71
GOPC-203ENST00000535237 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
GOPC-203ENST00000535237 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
GOPC-203ENST00000535237 PTMAP06454 111 aaKnown RBP19.46■□□□□ 0.71
GOPC-203ENST00000535237 DNTTIP2Q5QJE6 756 aaKnown RBP19.45■□□□□ 0.7
GOPC-203ENST00000535237 MYH16Q9H6N6 1097 aa19.45■□□□□ 0.7
GOPC-203ENST00000535237 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
GOPC-203ENST00000535237 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
GOPC-203ENST00000535237 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
GOPC-203ENST00000535237 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
GOPC-203ENST00000535237 ARID4BQ4LE39 1312 aaPredicted RBP19.43■□□□□ 0.7
GOPC-203ENST00000535237 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
GOPC-203ENST00000535237 L1TD1Q5T7N2 865 aaKnown RBP19.41■□□□□ 0.7
GOPC-203ENST00000535237 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
GOPC-203ENST00000535237 PPP1R15AO75807 674 aaPredicted RBP19.4■□□□□ 0.7
GOPC-203ENST00000535237 CC2D1BQ5T0F9 858 aaKnown RBP19.4■□□□□ 0.7
GOPC-203ENST00000535237 STAG3Q9UJ98 1225 aa19.39■□□□□ 0.69
GOPC-203ENST00000535237 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
GOPC-203ENST00000535237 FTSJ3Q8IY81 847 aaKnown RBP19.38■□□□□ 0.69
GOPC-203ENST00000535237 SPRYD3Q8NCJ5 442 aa19.37■□□□□ 0.69
GOPC-203ENST00000535237 FANCIQ9NVI1 1328 aa19.36■□□□□ 0.69
GOPC-203ENST00000535237 RCAN3Q9UKA8 241 aa19.35■□□□□ 0.69
GOPC-203ENST00000535237 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
GOPC-203ENST00000535237 PNNQ9H307 717 aaKnown RBP19.35■□□□□ 0.69
GOPC-203ENST00000535237 SLKQ9H2G2 1235 aaPredicted RBP19.34■□□□□ 0.69
GOPC-203ENST00000535237 TPRNQ4KMQ1 711 aa19.34■□□□□ 0.69
GOPC-203ENST00000535237 GZF1Q9H116 711 aaPredicted RBP19.32■□□□□ 0.68
GOPC-203ENST00000535237 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
GOPC-203ENST00000535237 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
GOPC-203ENST00000535237 PLEKHD1A6NEE1 506 aa19.29■□□□□ 0.68
GOPC-203ENST00000535237 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
GOPC-203ENST00000535237 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
GOPC-203ENST00000535237 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
GOPC-203ENST00000535237 CDCA8Q53HL2 280 aa19.28■□□□□ 0.68
GOPC-203ENST00000535237 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
GOPC-203ENST00000535237 PLCB2Q00722 1185 aa19.27■□□□□ 0.68
GOPC-203ENST00000535237 CFAP53Q96M91 514 aa19.26■□□□□ 0.67
GOPC-203ENST00000535237 FOXD1Q16676 465 aa19.26■□□□□ 0.67
GOPC-203ENST00000535237 HSCBQ8IWL3 235 aa19.26■□□□□ 0.67
GOPC-203ENST00000535237 MSNP26038 577 aaKnown RBP19.25■□□□□ 0.67
GOPC-203ENST00000535237 USP35Q9P2H5 1018 aa19.25■□□□□ 0.67
GOPC-203ENST00000535237 DCAF11Q8TEB1 546 aa19.23■□□□□ 0.67
GOPC-203ENST00000535237 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
GOPC-203ENST00000535237 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
GOPC-203ENST00000535237 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
GOPC-203ENST00000535237 SLC4A3P48751 1232 aa19.19■□□□□ 0.66
GOPC-203ENST00000535237 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
GOPC-203ENST00000535237 PDE4AP27815 886 aa19.19■□□□□ 0.66
GOPC-203ENST00000535237 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
GOPC-203ENST00000535237 FHAD1B1AJZ9 1412 aa19.18■□□□□ 0.66
GOPC-203ENST00000535237 GSE1Q14687 1217 aa19.18■□□□□ 0.66
GOPC-203ENST00000535237 CASC1Q6TDU7 716 aa19.17■□□□□ 0.66
GOPC-203ENST00000535237 ARID3AQ99856 593 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms