RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 MS4A3Q96HJ5 214 aa13.62□□□□□ -0.23
TNFRSF1A-206ENST00000535038 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
TNFRSF1A-206ENST00000535038 FBXO3Q9UK99 471 aa13.6□□□□□ -0.23
TNFRSF1A-206ENST00000535038 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
TNFRSF1A-206ENST00000535038 NUBP1P53384 320 aa13.52□□□□□ -0.25
TNFRSF1A-206ENST00000535038 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-206ENST00000535038 MAP3K13O43283 966 aa13.48□□□□□ -0.25
TNFRSF1A-206ENST00000535038 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-206ENST00000535038 PELP1Q8IZL8 1130 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-206ENST00000535038 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
TNFRSF1A-206ENST00000535038 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-206ENST00000535038 METRNQ9UJH8 293 aa13.4□□□□□ -0.26
TNFRSF1A-206ENST00000535038 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
TNFRSF1A-206ENST00000535038 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
TNFRSF1A-206ENST00000535038 ATN1P54259 1190 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-206ENST00000535038 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
TNFRSF1A-206ENST00000535038 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-206ENST00000535038 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
TNFRSF1A-206ENST00000535038 C7P10643 843 aa13.37□□□□□ -0.27
TNFRSF1A-206ENST00000535038 TIE1P35590 1138 aa13.37□□□□□ -0.27
TNFRSF1A-206ENST00000535038 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
TNFRSF1A-206ENST00000535038 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
TNFRSF1A-206ENST00000535038 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
TNFRSF1A-206ENST00000535038 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
TNFRSF1A-206ENST00000535038 IFNL1Q8IU54 200 aa13.29□□□□□ -0.28
TNFRSF1A-206ENST00000535038 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
TNFRSF1A-206ENST00000535038 PYGBP11216 843 aa13.26□□□□□ -0.29
TNFRSF1A-206ENST00000535038 GSE1Q14687 1217 aa13.22□□□□□ -0.29
TNFRSF1A-206ENST00000535038 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
TNFRSF1A-206ENST00000535038 TMEM106CQ9BVX2 250 aa13.19□□□□□ -0.3
TNFRSF1A-206ENST00000535038 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
TNFRSF1A-206ENST00000535038 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
TNFRSF1A-206ENST00000535038 SEC24BO95487 1268 aa13.17□□□□□ -0.3
TNFRSF1A-206ENST00000535038 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
TNFRSF1A-206ENST00000535038 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-206ENST00000535038 IER5LQ5T953 404 aa13.16□□□□□ -0.3
TNFRSF1A-206ENST00000535038 SPOCK2Q92563 424 aa13.14□□□□□ -0.31
TNFRSF1A-206ENST00000535038 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
TNFRSF1A-206ENST00000535038 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-206ENST00000535038 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
TNFRSF1A-206ENST00000535038 ZNF467Q7Z7K2 595 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-206ENST00000535038 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-206ENST00000535038 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-206ENST00000535038 PLCG2P16885 1265 aa13.03□□□□□ -0.32
TNFRSF1A-206ENST00000535038 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-206ENST00000535038 OCEL1Q9H607 264 aa12.96□□□□□ -0.33
TNFRSF1A-206ENST00000535038 PSEN1P49768 467 aa12.95□□□□□ -0.34
TNFRSF1A-206ENST00000535038 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
TNFRSF1A-206ENST00000535038 PDAP1Q13442 181 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-206ENST00000535038 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1A-206ENST00000535038 POTEMA6NI47 508 aa12.89□□□□□ -0.35
TNFRSF1A-206ENST00000535038 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
TNFRSF1A-206ENST00000535038 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
TNFRSF1A-206ENST00000535038 SLAIN1Q8ND83 568 aa12.86□□□□□ -0.35
TNFRSF1A-206ENST00000535038 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-206ENST00000535038 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-206ENST00000535038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
TNFRSF1A-206ENST00000535038 LCE2DQ5TA82 110 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-206ENST00000535038 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
TNFRSF1A-206ENST00000535038 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-206ENST00000535038 L3MBTL3Q96JM7 780 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1A-206ENST00000535038 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
TNFRSF1A-206ENST00000535038 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-206ENST00000535038 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
TNFRSF1A-206ENST00000535038 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-206ENST00000535038 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-206ENST00000535038 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
TNFRSF1A-206ENST00000535038 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
TNFRSF1A-206ENST00000535038 ST18O60284 1047 aa12.65□□□□□ -0.38
TNFRSF1A-206ENST00000535038 EFCAB3Q8N7B9 438 aa12.65□□□□□ -0.38
TNFRSF1A-206ENST00000535038 G3V3G9 751 aa12.64□□□□□ -0.39
TNFRSF1A-206ENST00000535038 SNPHO15079 494 aa12.64□□□□□ -0.39
TNFRSF1A-206ENST00000535038 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-206ENST00000535038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1A-206ENST00000535038 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1A-206ENST00000535038 BOLA1Q9Y3E2 137 aa12.61□□□□□ -0.39
TNFRSF1A-206ENST00000535038 NISCHQ9Y2I1 1504 aa12.58□□□□□ -0.4
TNFRSF1A-206ENST00000535038 TMEM121BQ9BXQ6 578 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-206ENST00000535038 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
TNFRSF1A-206ENST00000535038 SOX12O15370 315 aa12.54□□□□□ -0.4
TNFRSF1A-206ENST00000535038 ECM2O94769 699 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1A-206ENST00000535038 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
TNFRSF1A-206ENST00000535038 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-206ENST00000535038 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
TNFRSF1A-206ENST00000535038 PKD2Q13563 968 aa12.47□□□□□ -0.41
TNFRSF1A-206ENST00000535038 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
TNFRSF1A-206ENST00000535038 STK24Q9Y6E0 443 aa12.47□□□□□ -0.41
TNFRSF1A-206ENST00000535038 MICALL2Q8IY33 904 aa12.46□□□□□ -0.41
TNFRSF1A-206ENST00000535038 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
TNFRSF1A-206ENST00000535038 STK25O00506 426 aa12.44□□□□□ -0.42
TNFRSF1A-206ENST00000535038 RGL2O15211 777 aa12.42□□□□□ -0.42
TNFRSF1A-206ENST00000535038 NLRP6P59044 892 aa12.42□□□□□ -0.42
TNFRSF1A-206ENST00000535038 EMP3P54852 163 aa12.41□□□□□ -0.42
TNFRSF1A-206ENST00000535038 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-206ENST00000535038 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
TNFRSF1A-206ENST00000535038 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
TNFRSF1A-206ENST00000535038 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
TNFRSF1A-206ENST00000535038 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
TNFRSF1A-206ENST00000535038 MFRPQ9BY79 579 aa12.35□□□□□ -0.43
TNFRSF1A-206ENST00000535038 FAM205CA6NFA0 338 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms