RNA–Protein interactions for RNA: ENST00000534675.1

LINC02235-201, Transcript of long intergenic non-protein coding RNA 2235, humanhuman

TSL 5 BASIC

Gene LINC02235, Length 466 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02235-201ENST00000534675 METRNQ9UJH8 293 aa15.21■□□□□ 0.03
LINC02235-201ENST00000534675 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.03
LINC02235-201ENST00000534675 SLC39A7Q92504 469 aa15.16■□□□□ 0.02
LINC02235-201ENST00000534675 MIER1Q8N108 512 aa15.15■□□□□ 0.02
LINC02235-201ENST00000534675 C7P10643 843 aa15.14■□□□□ 0.01
LINC02235-201ENST00000534675 KIF12Q96FN5 646 aa15.14■□□□□ 0.01
LINC02235-201ENST00000534675 PLSCR2Q9NRY7 297 aa15.14■□□□□ 0.01
LINC02235-201ENST00000534675 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
LINC02235-201ENST00000534675 POTEJP0CG39 1038 aa15.11■□□□□ 0.01
LINC02235-201ENST00000534675 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
LINC02235-201ENST00000534675 RASEFQ8IZ41 740 aa15.09■□□□□ 0.01
LINC02235-201ENST00000534675 TRPC6Q9Y210 931 aa15.08■□□□□ 0
LINC02235-201ENST00000534675 MAP3K13O43283 966 aa15.06■□□□□ 0
LINC02235-201ENST00000534675 BMP2KQ9NSY1 1161 aaPredicted RBP15.04■□□□□ -0
LINC02235-201ENST00000534675 POTEMA6NI47 508 aa15.02■□□□□ -0
LINC02235-201ENST00000534675 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
LINC02235-201ENST00000534675 POTEGQ6S5H5 508 aa14.98□□□□□ -0.01
LINC02235-201ENST00000534675 MAMSTRQ6ZN01 415 aa14.98□□□□□ -0.01
LINC02235-201ENST00000534675 POTEFA5A3E0 1075 aa14.97□□□□□ -0.01
LINC02235-201ENST00000534675 TIE1P35590 1138 aa14.95□□□□□ -0.02
LINC02235-201ENST00000534675 SCUBE2Q9NQ36 999 aa14.9□□□□□ -0.02
LINC02235-201ENST00000534675 TTLL13PA6NNM8 815 aa14.89□□□□□ -0.03
LINC02235-201ENST00000534675 NUBP1P53384 320 aa14.88□□□□□ -0.03
LINC02235-201ENST00000534675 PCDHB13Q9Y5F0 798 aa14.86□□□□□ -0.03
LINC02235-201ENST00000534675 COLQQ9Y215 455 aaPredicted RBP14.85□□□□□ -0.03
LINC02235-201ENST00000534675 ZBTB47Q9UFB7 747 aaPredicted RBP14.84□□□□□ -0.03
LINC02235-201ENST00000534675 FKBP8Q14318 412 aa14.83□□□□□ -0.04
LINC02235-201ENST00000534675 LCE2DQ5TA82 110 aaPredicted RBP14.83□□□□□ -0.04
LINC02235-201ENST00000534675 FAM163AQ96GL9 167 aaPredicted RBP14.83□□□□□ -0.04
LINC02235-201ENST00000534675 SEC24BO95487 1268 aa14.82□□□□□ -0.04
LINC02235-201ENST00000534675 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
LINC02235-201ENST00000534675 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
LINC02235-201ENST00000534675 IFNL1Q8IU54 200 aa14.78□□□□□ -0.04
LINC02235-201ENST00000534675 FAM212AQ96EL1 285 aa14.76□□□□□ -0.05
LINC02235-201ENST00000534675 IER5LQ5T953 404 aa14.73□□□□□ -0.05
LINC02235-201ENST00000534675 TMEM106CQ9BVX2 250 aa14.71□□□□□ -0.05
LINC02235-201ENST00000534675 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
LINC02235-201ENST00000534675 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
LINC02235-201ENST00000534675 PYGBP11216 843 aa14.61□□□□□ -0.07
LINC02235-201ENST00000534675 PLCG2P16885 1265 aa14.59□□□□□ -0.07
LINC02235-201ENST00000534675 SLAIN1Q8ND83 568 aa14.58□□□□□ -0.08
LINC02235-201ENST00000534675 IRX5P78411 483 aaPredicted RBP14.56□□□□□ -0.08
LINC02235-201ENST00000534675 PCDHB8Q9UN66 801 aa14.55□□□□□ -0.08
LINC02235-201ENST00000534675 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
LINC02235-201ENST00000534675 OCEL1Q9H607 264 aa14.48□□□□□ -0.09
LINC02235-201ENST00000534675 ST18O60284 1047 aa14.47□□□□□ -0.09
LINC02235-201ENST00000534675 CDAN1Q8IWY9 1227 aa14.46□□□□□ -0.09
LINC02235-201ENST00000534675 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
LINC02235-201ENST00000534675 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
LINC02235-201ENST00000534675 GSE1Q14687 1217 aa14.37□□□□□ -0.11
LINC02235-201ENST00000534675 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
LINC02235-201ENST00000534675 ZNF467Q7Z7K2 595 aaPredicted RBP14.34□□□□□ -0.11
LINC02235-201ENST00000534675 PDCD7Q8N8D1 485 aaKnown RBP14.31□□□□□ -0.12
LINC02235-201ENST00000534675 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
LINC02235-201ENST00000534675 CHRM1P11229 460 aaPredicted RBP14.28□□□□□ -0.12
LINC02235-201ENST00000534675 MKRN3Q13064 507 aaKnown RBP14.28□□□□□ -0.12
LINC02235-201ENST00000534675 SNPHO15079 494 aa14.26□□□□□ -0.13
LINC02235-201ENST00000534675 PSEN1P49768 467 aa14.26□□□□□ -0.13
LINC02235-201ENST00000534675 TMEM121BQ9BXQ6 578 aaPredicted RBP14.24□□□□□ -0.13
LINC02235-201ENST00000534675 MARVELD3Q96A59 401 aa14.23□□□□□ -0.13
LINC02235-201ENST00000534675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC02235-201ENST00000534675 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
LINC02235-201ENST00000534675 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.13
LINC02235-201ENST00000534675 PDAP1Q13442 181 aaKnown RBP14.15□□□□□ -0.14
LINC02235-201ENST00000534675 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
LINC02235-201ENST00000534675 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
LINC02235-201ENST00000534675 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
LINC02235-201ENST00000534675 DPY19L2Q6NUT2 758 aa14.13□□□□□ -0.15
LINC02235-201ENST00000534675 SPNS2Q8IVW8 549 aa14.12□□□□□ -0.15
LINC02235-201ENST00000534675 ILDR1Q86SU0 546 aaPredicted RBP14.1□□□□□ -0.15
LINC02235-201ENST00000534675 CABP2Q9NPB3 220 aa14.1□□□□□ -0.15
LINC02235-201ENST00000534675 MMRN1Q13201 1228 aa14.09□□□□□ -0.15
LINC02235-201ENST00000534675 EMP3P54852 163 aa14.08□□□□□ -0.16
LINC02235-201ENST00000534675 POTEB3A0JP26 581 aa14.02□□□□□ -0.17
LINC02235-201ENST00000534675 POTEBQ6S5H4 581 aa14.02□□□□□ -0.17
LINC02235-201ENST00000534675 FAM205CA6NFA0 338 aa14□□□□□ -0.17
LINC02235-201ENST00000534675 BOLA1Q9Y3E2 137 aa14□□□□□ -0.17
LINC02235-201ENST00000534675 G3V3G9 751 aa13.99□□□□□ -0.17
LINC02235-201ENST00000534675 HS3ST6Q96QI5 342 aa13.99□□□□□ -0.17
LINC02235-201ENST00000534675 KRTAP3-3Q9BYR6 98 aa13.94□□□□□ -0.18
LINC02235-201ENST00000534675 KRTAP3-2Q9BYR7 98 aa13.94□□□□□ -0.18
LINC02235-201ENST00000534675 HOXB3P14651 431 aaPredicted RBP13.93□□□□□ -0.18
LINC02235-201ENST00000534675 EFCAB3Q8N7B9 438 aa13.91□□□□□ -0.18
LINC02235-201ENST00000534675 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
LINC02235-201ENST00000534675 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
LINC02235-201ENST00000534675 HOXB1P14653 301 aaPredicted RBP13.82□□□□□ -0.2
LINC02235-201ENST00000534675 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
LINC02235-201ENST00000534675 ERBB3P21860 1342 aa13.77□□□□□ -0.21
LINC02235-201ENST00000534675 MICALL2Q8IY33 904 aa13.77□□□□□ -0.21
LINC02235-201ENST00000534675 TMEM92Q6UXU6 159 aa13.76□□□□□ -0.21
LINC02235-201ENST00000534675 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
LINC02235-201ENST00000534675 RIOK3O14730 519 aaKnown RBP13.74□□□□□ -0.21
LINC02235-201ENST00000534675 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
LINC02235-201ENST00000534675 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
LINC02235-201ENST00000534675 MS4A4AQ96JQ5 239 aa13.72□□□□□ -0.21
LINC02235-201ENST00000534675 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
LINC02235-201ENST00000534675 SOX12O15370 315 aa13.71□□□□□ -0.21
LINC02235-201ENST00000534675 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
LINC02235-201ENST00000534675 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
LINC02235-201ENST00000534675 VGFO15240 615 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 317.4 ms