RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 C7P10643 843 aa14.52□□□□□ -0.09
SOX6-216ENST00000533658 SLC39A7Q92504 469 aa14.51□□□□□ -0.09
SOX6-216ENST00000533658 ASTLQ6HA08 431 aaPredicted RBP14.49□□□□□ -0.09
SOX6-216ENST00000533658 SCUBE2Q9NQ36 999 aa14.47□□□□□ -0.09
SOX6-216ENST00000533658 ATMINO43313 823 aaPredicted RBP14.46□□□□□ -0.09
SOX6-216ENST00000533658 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
SOX6-216ENST00000533658 CDAN1Q8IWY9 1227 aa14.43□□□□□ -0.1
SOX6-216ENST00000533658 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
SOX6-216ENST00000533658 MS4A3Q96HJ5 214 aa14.41□□□□□ -0.1
SOX6-216ENST00000533658 SPDYE4A6NLX3 237 aa14.34□□□□□ -0.11
SOX6-216ENST00000533658 ATN1P54259 1190 aaPredicted RBP14.26□□□□□ -0.13
SOX6-216ENST00000533658 POTEFA5A3E0 1075 aa14.24□□□□□ -0.13
SOX6-216ENST00000533658 MMRN1Q13201 1228 aa14.2□□□□□ -0.14
SOX6-216ENST00000533658 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
SOX6-216ENST00000533658 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
SOX6-216ENST00000533658 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
SOX6-216ENST00000533658 SPNS2Q8IVW8 549 aa14.11□□□□□ -0.15
SOX6-216ENST00000533658 BMP2KQ9NSY1 1161 aaPredicted RBP14.11□□□□□ -0.15
SOX6-216ENST00000533658 KIF12Q96FN5 646 aa14.1□□□□□ -0.15
SOX6-216ENST00000533658 ST18O60284 1047 aa14.08□□□□□ -0.16
SOX6-216ENST00000533658 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
SOX6-216ENST00000533658 COLQQ9Y215 455 aaPredicted RBP14.04□□□□□ -0.16
SOX6-216ENST00000533658 TIE1P35590 1138 aa14.03□□□□□ -0.16
SOX6-216ENST00000533658 SEC24BO95487 1268 aa14□□□□□ -0.17
SOX6-216ENST00000533658 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
SOX6-216ENST00000533658 MAP3K13O43283 966 aa13.97□□□□□ -0.17
SOX6-216ENST00000533658 SLAIN1Q8ND83 568 aa13.96□□□□□ -0.17
SOX6-216ENST00000533658 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
SOX6-216ENST00000533658 PROM2Q8N271 834 aa13.91□□□□□ -0.18
SOX6-216ENST00000533658 IER5LQ5T953 404 aa13.87□□□□□ -0.19
SOX6-216ENST00000533658 RASEFQ8IZ41 740 aa13.86□□□□□ -0.19
SOX6-216ENST00000533658 TMEM121BQ9BXQ6 578 aaPredicted RBP13.86□□□□□ -0.19
SOX6-216ENST00000533658 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
SOX6-216ENST00000533658 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
SOX6-216ENST00000533658 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
SOX6-216ENST00000533658 MARVELD3Q96A59 401 aa13.76□□□□□ -0.21
SOX6-216ENST00000533658 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
SOX6-216ENST00000533658 MIER1Q8N108 512 aa13.74□□□□□ -0.21
SOX6-216ENST00000533658 PLCG2P16885 1265 aa13.68□□□□□ -0.22
SOX6-216ENST00000533658 SNPHO15079 494 aa13.67□□□□□ -0.22
SOX6-216ENST00000533658 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
SOX6-216ENST00000533658 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
SOX6-216ENST00000533658 ABCC9O60706 1549 aa13.63□□□□□ -0.23
SOX6-216ENST00000533658 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
SOX6-216ENST00000533658 KRTAP3-3Q9BYR6 98 aa13.58□□□□□ -0.24
SOX6-216ENST00000533658 KRTAP3-2Q9BYR7 98 aa13.58□□□□□ -0.24
SOX6-216ENST00000533658 NUBP1P53384 320 aa13.57□□□□□ -0.24
SOX6-216ENST00000533658 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
SOX6-216ENST00000533658 OCEL1Q9H607 264 aa13.53□□□□□ -0.24
SOX6-216ENST00000533658 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
SOX6-216ENST00000533658 EMP3P54852 163 aa13.52□□□□□ -0.25
SOX6-216ENST00000533658 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
SOX6-216ENST00000533658 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
SOX6-216ENST00000533658 FAM212AQ96EL1 285 aa13.5□□□□□ -0.25
SOX6-216ENST00000533658 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
SOX6-216ENST00000533658 HS3ST6Q96QI5 342 aa13.47□□□□□ -0.25
SOX6-216ENST00000533658 FAM205CA6NFA0 338 aa13.44□□□□□ -0.26
SOX6-216ENST00000533658 CCDC180Q9P1Z9 1646 aa13.37□□□□□ -0.27
SOX6-216ENST00000533658 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
SOX6-216ENST00000533658 PYGBP11216 843 aa13.32□□□□□ -0.28
SOX6-216ENST00000533658 PDCD7Q8N8D1 485 aaKnown RBP13.32□□□□□ -0.28
SOX6-216ENST00000533658 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
SOX6-216ENST00000533658 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
SOX6-216ENST00000533658 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
SOX6-216ENST00000533658 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
SOX6-216ENST00000533658 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
SOX6-216ENST00000533658 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
SOX6-216ENST00000533658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
SOX6-216ENST00000533658 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
SOX6-216ENST00000533658 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
SOX6-216ENST00000533658 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
SOX6-216ENST00000533658 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
SOX6-216ENST00000533658 ERBB3P21860 1342 aa13.06□□□□□ -0.32
SOX6-216ENST00000533658 PSEN1P49768 467 aa13.03□□□□□ -0.32
SOX6-216ENST00000533658 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.33
SOX6-216ENST00000533658 GSE1Q14687 1217 aa13.01□□□□□ -0.33
SOX6-216ENST00000533658 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
SOX6-216ENST00000533658 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
SOX6-216ENST00000533658 BOLA1Q9Y3E2 137 aa12.97□□□□□ -0.33
SOX6-216ENST00000533658 G3V3G9 751 aa12.96□□□□□ -0.33
SOX6-216ENST00000533658 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
SOX6-216ENST00000533658 PTGER2P43116 358 aa12.96□□□□□ -0.33
SOX6-216ENST00000533658 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
SOX6-216ENST00000533658 VARS2Q5ST30 1063 aaKnown RBP12.94□□□□□ -0.34
SOX6-216ENST00000533658 FKBP8Q14318 412 aa12.93□□□□□ -0.34
SOX6-216ENST00000533658 PDAP1Q13442 181 aaKnown RBP12.91□□□□□ -0.34
SOX6-216ENST00000533658 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
SOX6-216ENST00000533658 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
SOX6-216ENST00000533658 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
SOX6-216ENST00000533658 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
SOX6-216ENST00000533658 ZNF687Q8N1G0 1237 aa12.85□□□□□ -0.35
SOX6-216ENST00000533658 RB1CC1Q8TDY2 1594 aa12.85□□□□□ -0.35
SOX6-216ENST00000533658 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
SOX6-216ENST00000533658 PLA2G2EQ9NZK7 142 aa12.78□□□□□ -0.36
SOX6-216ENST00000533658 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
SOX6-216ENST00000533658 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
SOX6-216ENST00000533658 NACADO15069 1562 aa12.7□□□□□ -0.38
SOX6-216ENST00000533658 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
SOX6-216ENST00000533658 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
SOX6-216ENST00000533658 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms