RNA–Protein interactions for RNA: ENST00000532603.5

PICALM-220, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 4

Gene PICALM, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-220ENST00000532603 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
PICALM-220ENST00000532603 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
PICALM-220ENST00000532603 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
PICALM-220ENST00000532603 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
PICALM-220ENST00000532603 FAM212AQ96EL1 285 aa13.19□□□□□ -0.3
PICALM-220ENST00000532603 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
PICALM-220ENST00000532603 MS4A3Q96HJ5 214 aa13.18□□□□□ -0.3
PICALM-220ENST00000532603 CLCN6P51797 869 aa13.16□□□□□ -0.3
PICALM-220ENST00000532603 MAP3K13O43283 966 aa13.14□□□□□ -0.31
PICALM-220ENST00000532603 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
PICALM-220ENST00000532603 TRPC6Q9Y210 931 aa13.1□□□□□ -0.31
PICALM-220ENST00000532603 PYGBP11216 843 aa13.08□□□□□ -0.32
PICALM-220ENST00000532603 GSE1Q14687 1217 aa13.06□□□□□ -0.32
PICALM-220ENST00000532603 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
PICALM-220ENST00000532603 PCDHB13Q9Y5F0 798 aa13.02□□□□□ -0.33
PICALM-220ENST00000532603 SGIP1Q9BQI5 828 aa13.01□□□□□ -0.33
PICALM-220ENST00000532603 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
PICALM-220ENST00000532603 CHRM1P11229 460 aaPredicted RBP12.99□□□□□ -0.33
PICALM-220ENST00000532603 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
PICALM-220ENST00000532603 DCBLD2Q96PD2 775 aa12.98□□□□□ -0.33
PICALM-220ENST00000532603 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
PICALM-220ENST00000532603 BMP2KQ9NSY1 1161 aaPredicted RBP12.97□□□□□ -0.33
PICALM-220ENST00000532603 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.33
PICALM-220ENST00000532603 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
PICALM-220ENST00000532603 ATN1P54259 1190 aaPredicted RBP12.92□□□□□ -0.34
PICALM-220ENST00000532603 TIE1P35590 1138 aa12.91□□□□□ -0.34
PICALM-220ENST00000532603 TTLL13PA6NNM8 815 aa12.9□□□□□ -0.34
PICALM-220ENST00000532603 PKD2Q13563 968 aa12.89□□□□□ -0.35
PICALM-220ENST00000532603 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
PICALM-220ENST00000532603 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
PICALM-220ENST00000532603 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
PICALM-220ENST00000532603 TMEM106CQ9BVX2 250 aa12.82□□□□□ -0.36
PICALM-220ENST00000532603 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
PICALM-220ENST00000532603 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
PICALM-220ENST00000532603 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
PICALM-220ENST00000532603 PSEN1P49768 467 aa12.76□□□□□ -0.37
PICALM-220ENST00000532603 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
PICALM-220ENST00000532603 SLC39A7Q92504 469 aa12.74□□□□□ -0.37
PICALM-220ENST00000532603 ECM2O94769 699 aaPredicted RBP12.73□□□□□ -0.37
PICALM-220ENST00000532603 PDAP1Q13442 181 aaKnown RBP12.73□□□□□ -0.37
PICALM-220ENST00000532603 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
PICALM-220ENST00000532603 RGL2O15211 777 aa12.72□□□□□ -0.37
PICALM-220ENST00000532603 C7P10643 843 aa12.72□□□□□ -0.37
PICALM-220ENST00000532603 COLQQ9Y215 455 aaPredicted RBP12.71□□□□□ -0.37
PICALM-220ENST00000532603 LHX8Q68G74 356 aa12.7□□□□□ -0.38
PICALM-220ENST00000532603 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
PICALM-220ENST00000532603 IER5LQ5T953 404 aa12.66□□□□□ -0.38
PICALM-220ENST00000532603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
PICALM-220ENST00000532603 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.38
PICALM-220ENST00000532603 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
PICALM-220ENST00000532603 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
PICALM-220ENST00000532603 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
PICALM-220ENST00000532603 ILDR1Q86SU0 546 aaPredicted RBP12.58□□□□□ -0.4
PICALM-220ENST00000532603 PDCD7Q8N8D1 485 aaKnown RBP12.57□□□□□ -0.4
PICALM-220ENST00000532603 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
PICALM-220ENST00000532603 SEC24BO95487 1268 aa12.54□□□□□ -0.4
PICALM-220ENST00000532603 EFCAB3Q8N7B9 438 aa12.54□□□□□ -0.4
PICALM-220ENST00000532603 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
PICALM-220ENST00000532603 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
PICALM-220ENST00000532603 PLCG2P16885 1265 aa12.51□□□□□ -0.41
PICALM-220ENST00000532603 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
PICALM-220ENST00000532603 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
PICALM-220ENST00000532603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.411e-7■■■□□ 19.2
PICALM-220ENST00000532603 STK25O00506 426 aa12.47□□□□□ -0.41
PICALM-220ENST00000532603 DPY19L2Q6NUT2 758 aa12.47□□□□□ -0.41
PICALM-220ENST00000532603 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
PICALM-220ENST00000532603 STK24Q9Y6E0 443 aa12.47□□□□□ -0.41
PICALM-220ENST00000532603 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
PICALM-220ENST00000532603 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
PICALM-220ENST00000532603 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
PICALM-220ENST00000532603 HS6ST3Q8IZP7 471 aa12.41□□□□□ -0.42
PICALM-220ENST00000532603 FBXO22Q8NEZ5 403 aa12.4□□□□□ -0.42
PICALM-220ENST00000532603 MFRPQ9BY79 579 aa12.4□□□□□ -0.42
PICALM-220ENST00000532603 SOX12O15370 315 aa12.38□□□□□ -0.43
PICALM-220ENST00000532603 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
PICALM-220ENST00000532603 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
PICALM-220ENST00000532603 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
PICALM-220ENST00000532603 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
PICALM-220ENST00000532603 NKX1-1Q15270 411 aaPredicted RBP12.33□□□□□ -0.44
PICALM-220ENST00000532603 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
PICALM-220ENST00000532603 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
PICALM-220ENST00000532603 BOLA1Q9Y3E2 137 aa12.29□□□□□ -0.44
PICALM-220ENST00000532603 NLRP6P59044 892 aa12.28□□□□□ -0.44
PICALM-220ENST00000532603 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
PICALM-220ENST00000532603 MICALL2Q8IY33 904 aa12.25□□□□□ -0.45
PICALM-220ENST00000532603 PPP1R37O75864 691 aa12.24□□□□□ -0.45
PICALM-220ENST00000532603 SLAIN1Q8ND83 568 aa12.23□□□□□ -0.45
PICALM-220ENST00000532603 DCAF8L2P0C7V8 631 aa12.22□□□□□ -0.45
PICALM-220ENST00000532603 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
PICALM-220ENST00000532603 TMEM92Q6UXU6 159 aa12.21□□□□□ -0.45
PICALM-220ENST00000532603 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
PICALM-220ENST00000532603 C3orf67Q6ZVT6 689 aa12.2□□□□□ -0.46
PICALM-220ENST00000532603 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
PICALM-220ENST00000532603 G3V3G9 751 aa12.11□□□□□ -0.47
PICALM-220ENST00000532603 KIF3CO14782 793 aa12.06□□□□□ -0.48
PICALM-220ENST00000532603 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
PICALM-220ENST00000532603 FAM163AQ96GL9 167 aaPredicted RBP12.04□□□□□ -0.48
PICALM-220ENST00000532603 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.49
PICALM-220ENST00000532603 ST18O60284 1047 aa12.01□□□□□ -0.49
PICALM-220ENST00000532603 C2orf72A6NCS6 295 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms