RNA–Protein interactions for RNA: ENST00000532556.1

RSF1-211, Transcript of remodeling and spacing factor 1, humanhuman

TSL 3

Gene RSF1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-211ENST00000532556 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
RSF1-211ENST00000532556 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
RSF1-211ENST00000532556 LCE2DQ5TA82 110 aaPredicted RBP13.49□□□□□ -0.25
RSF1-211ENST00000532556 C7P10643 843 aa13.48□□□□□ -0.25
RSF1-211ENST00000532556 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
RSF1-211ENST00000532556 IFNLR1Q8IU57 520 aaPredicted RBP13.46□□□□□ -0.25
RSF1-211ENST00000532556 SLC39A7Q92504 469 aa13.46□□□□□ -0.25
RSF1-211ENST00000532556 METRNQ9UJH8 293 aa13.46□□□□□ -0.25
RSF1-211ENST00000532556 POTEJP0CG39 1038 aa13.45□□□□□ -0.26
RSF1-211ENST00000532556 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
RSF1-211ENST00000532556 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
RSF1-211ENST00000532556 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
RSF1-211ENST00000532556 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
RSF1-211ENST00000532556 SCUBE2Q9NQ36 999 aa13.37□□□□□ -0.27
RSF1-211ENST00000532556 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
RSF1-211ENST00000532556 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
RSF1-211ENST00000532556 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
RSF1-211ENST00000532556 MIER1Q8N108 512 aa13.31□□□□□ -0.28
RSF1-211ENST00000532556 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
RSF1-211ENST00000532556 MS4A3Q96HJ5 214 aa13.26□□□□□ -0.29
RSF1-211ENST00000532556 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
RSF1-211ENST00000532556 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
RSF1-211ENST00000532556 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
RSF1-211ENST00000532556 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
RSF1-211ENST00000532556 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
RSF1-211ENST00000532556 PKD2Q13563 968 aa13.16□□□□□ -0.3
RSF1-211ENST00000532556 ATN1P54259 1190 aaPredicted RBP13.14□□□□□ -0.31
RSF1-211ENST00000532556 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
RSF1-211ENST00000532556 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
RSF1-211ENST00000532556 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
RSF1-211ENST00000532556 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
RSF1-211ENST00000532556 MMRN1Q13201 1228 aa13□□□□□ -0.33
RSF1-211ENST00000532556 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
RSF1-211ENST00000532556 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
RSF1-211ENST00000532556 TIE1P35590 1138 aa12.97□□□□□ -0.33
RSF1-211ENST00000532556 KIF12Q96FN5 646 aa12.96□□□□□ -0.33
RSF1-211ENST00000532556 ST18O60284 1047 aa12.94□□□□□ -0.34
RSF1-211ENST00000532556 SPNS2Q8IVW8 549 aa12.94□□□□□ -0.34
RSF1-211ENST00000532556 SEC24BO95487 1268 aa12.92□□□□□ -0.34
RSF1-211ENST00000532556 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
RSF1-211ENST00000532556 COLQQ9Y215 455 aaPredicted RBP12.91□□□□□ -0.34
RSF1-211ENST00000532556 RGL2O15211 777 aa12.9□□□□□ -0.34
RSF1-211ENST00000532556 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
RSF1-211ENST00000532556 IER5LQ5T953 404 aa12.87□□□□□ -0.35
RSF1-211ENST00000532556 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
RSF1-211ENST00000532556 TMEM121BQ9BXQ6 578 aaPredicted RBP12.85□□□□□ -0.35
RSF1-211ENST00000532556 GSE1Q14687 1217 aa12.84□□□□□ -0.35
RSF1-211ENST00000532556 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
RSF1-211ENST00000532556 SLAIN1Q8ND83 568 aa12.84□□□□□ -0.35
RSF1-211ENST00000532556 NUBP1P53384 320 aa12.83□□□□□ -0.36
RSF1-211ENST00000532556 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
RSF1-211ENST00000532556 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
RSF1-211ENST00000532556 MAP3K13O43283 966 aa12.8□□□□□ -0.36
RSF1-211ENST00000532556 TRIM41Q8WV44 630 aa12.8□□□□□ -0.36
RSF1-211ENST00000532556 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
RSF1-211ENST00000532556 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
RSF1-211ENST00000532556 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
RSF1-211ENST00000532556 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
RSF1-211ENST00000532556 BBXQ8WY36 941 aaPredicted RBP12.73□□□□□ -0.37
RSF1-211ENST00000532556 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
RSF1-211ENST00000532556 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
RSF1-211ENST00000532556 SNPHO15079 494 aa12.7□□□□□ -0.38
RSF1-211ENST00000532556 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
RSF1-211ENST00000532556 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
RSF1-211ENST00000532556 RNF25Q96BH1 459 aaPredicted RBP12.68□□□□□ -0.38
RSF1-211ENST00000532556 RIOK3O14730 519 aaKnown RBP12.64□□□□□ -0.39
RSF1-211ENST00000532556 PYGBP11216 843 aa12.63□□□□□ -0.39
RSF1-211ENST00000532556 PLCG2P16885 1265 aa12.61□□□□□ -0.39
RSF1-211ENST00000532556 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
RSF1-211ENST00000532556 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
RSF1-211ENST00000532556 SPRYD3Q8NCJ5 442 aa12.57□□□□□ -0.4
RSF1-211ENST00000532556 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
RSF1-211ENST00000532556 STK25O00506 426 aa12.55□□□□□ -0.4
RSF1-211ENST00000532556 IRX5P78411 483 aaPredicted RBP12.55□□□□□ -0.4
RSF1-211ENST00000532556 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
RSF1-211ENST00000532556 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
RSF1-211ENST00000532556 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
RSF1-211ENST00000532556 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.51□□□□□ -0.41
RSF1-211ENST00000532556 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
RSF1-211ENST00000532556 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
RSF1-211ENST00000532556 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
RSF1-211ENST00000532556 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
RSF1-211ENST00000532556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
RSF1-211ENST00000532556 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
RSF1-211ENST00000532556 STK24Q9Y6E0 443 aa12.47□□□□□ -0.41
RSF1-211ENST00000532556 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
RSF1-211ENST00000532556 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.41
RSF1-211ENST00000532556 EMP3P54852 163 aa12.45□□□□□ -0.42
RSF1-211ENST00000532556 IFNL1Q8IU54 200 aa12.45□□□□□ -0.42
RSF1-211ENST00000532556 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
RSF1-211ENST00000532556 NKX1-1Q15270 411 aaPredicted RBP12.41□□□□□ -0.42
RSF1-211ENST00000532556 ZNF467Q7Z7K2 595 aaPredicted RBP12.41□□□□□ -0.42
RSF1-211ENST00000532556 HS3ST6Q96QI5 342 aa12.41□□□□□ -0.42
RSF1-211ENST00000532556 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
RSF1-211ENST00000532556 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
RSF1-211ENST00000532556 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
RSF1-211ENST00000532556 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
RSF1-211ENST00000532556 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
RSF1-211ENST00000532556 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
RSF1-211ENST00000532556 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms