RNA–Protein interactions for RNA: ENST00000532443.1

PPFIA1-221, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-221ENST00000532443 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.53
PPFIA1-221ENST00000532443 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
PPFIA1-221ENST00000532443 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
PPFIA1-221ENST00000532443 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
PPFIA1-221ENST00000532443 CIZ1Q9ULV3 898 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-221ENST00000532443 GABBR2O75899 941 aa11.64□□□□□ -0.55
PPFIA1-221ENST00000532443 PYGBP11216 843 aa11.6□□□□□ -0.55
PPFIA1-221ENST00000532443 GSE1Q14687 1217 aa11.59□□□□□ -0.55
PPFIA1-221ENST00000532443 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
PPFIA1-221ENST00000532443 MAP3K13O43283 966 aa11.56□□□□□ -0.56
PPFIA1-221ENST00000532443 KIF12Q96FN5 646 aa11.56□□□□□ -0.56
PPFIA1-221ENST00000532443 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
PPFIA1-221ENST00000532443 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
PPFIA1-221ENST00000532443 CLCN6P51797 869 aa11.48□□□□□ -0.57
PPFIA1-221ENST00000532443 TRPC6Q9Y210 931 aa11.47□□□□□ -0.57
PPFIA1-221ENST00000532443 IFNL1Q8IU54 200 aa11.46□□□□□ -0.57
PPFIA1-221ENST00000532443 DCBLD2Q96PD2 775 aa11.46□□□□□ -0.57
PPFIA1-221ENST00000532443 PCDHB8Q9UN66 801 aa11.45□□□□□ -0.58
PPFIA1-221ENST00000532443 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
PPFIA1-221ENST00000532443 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
PPFIA1-221ENST00000532443 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
PPFIA1-221ENST00000532443 PKD2Q13563 968 aa11.39□□□□□ -0.59
PPFIA1-221ENST00000532443 SGIP1Q9BQI5 828 aa11.39□□□□□ -0.59
PPFIA1-221ENST00000532443 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
PPFIA1-221ENST00000532443 BMP2KQ9NSY1 1161 aaPredicted RBP11.36□□□□□ -0.59
PPFIA1-221ENST00000532443 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
PPFIA1-221ENST00000532443 ATMINO43313 823 aaPredicted RBP11.33□□□□□ -0.6
PPFIA1-221ENST00000532443 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
PPFIA1-221ENST00000532443 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.6
PPFIA1-221ENST00000532443 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
PPFIA1-221ENST00000532443 TIE1P35590 1138 aa11.31□□□□□ -0.6
PPFIA1-221ENST00000532443 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
PPFIA1-221ENST00000532443 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
PPFIA1-221ENST00000532443 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
PPFIA1-221ENST00000532443 RGL2O15211 777 aa11.29□□□□□ -0.6
PPFIA1-221ENST00000532443 PSEN1P49768 467 aa11.29□□□□□ -0.6
PPFIA1-221ENST00000532443 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
PPFIA1-221ENST00000532443 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
PPFIA1-221ENST00000532443 TRIM35Q9UPQ4 493 aa11.25□□□□□ -0.61
PPFIA1-221ENST00000532443 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
PPFIA1-221ENST00000532443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
PPFIA1-221ENST00000532443 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
PPFIA1-221ENST00000532443 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
PPFIA1-221ENST00000532443 LHX8Q68G74 356 aa11.19□□□□□ -0.62
PPFIA1-221ENST00000532443 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
PPFIA1-221ENST00000532443 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
PPFIA1-221ENST00000532443 CABP2Q9NPB3 220 aa11.18□□□□□ -0.62
PPFIA1-221ENST00000532443 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
PPFIA1-221ENST00000532443 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
PPFIA1-221ENST00000532443 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
PPFIA1-221ENST00000532443 C7P10643 843 aa11.14□□□□□ -0.63
PPFIA1-221ENST00000532443 STK25O00506 426 aa11.13□□□□□ -0.63
PPFIA1-221ENST00000532443 BCL11BQ9C0K0 894 aaPredicted RBP11.13□□□□□ -0.63
PPFIA1-221ENST00000532443 SEC24BO95487 1268 aa11.12□□□□□ -0.63
PPFIA1-221ENST00000532443 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
PPFIA1-221ENST00000532443 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
PPFIA1-221ENST00000532443 STK24Q9Y6E0 443 aa11.12□□□□□ -0.63
PPFIA1-221ENST00000532443 COLQQ9Y215 455 aaPredicted RBP11.11□□□□□ -0.63
PPFIA1-221ENST00000532443 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
PPFIA1-221ENST00000532443 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
PPFIA1-221ENST00000532443 IER5LQ5T953 404 aa11.08□□□□□ -0.64
PPFIA1-221ENST00000532443 PLCG2P16885 1265 aa11.07□□□□□ -0.64
PPFIA1-221ENST00000532443 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
PPFIA1-221ENST00000532443 CHGAP10645 457 aaKnown RBP11.06□□□□□ -0.64
PPFIA1-221ENST00000532443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.05□□□□□ -0.642e-11■■■□□ 16.7
PPFIA1-221ENST00000532443 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
PPFIA1-221ENST00000532443 OCEL1Q9H607 264 aa11.01□□□□□ -0.65
PPFIA1-221ENST00000532443 PHF8Q9UPP1 1060 aa10.99□□□□□ -0.65
PPFIA1-221ENST00000532443 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
PPFIA1-221ENST00000532443 HS6ST3Q8IZP7 471 aa10.98□□□□□ -0.65
PPFIA1-221ENST00000532443 PDCD7Q8N8D1 485 aaKnown RBP10.98□□□□□ -0.65
PPFIA1-221ENST00000532443 DPY19L2Q6NUT2 758 aa10.97□□□□□ -0.65
PPFIA1-221ENST00000532443 SOX12O15370 315 aa10.94□□□□□ -0.66
PPFIA1-221ENST00000532443 MFRPQ9BY79 579 aa10.92□□□□□ -0.66
PPFIA1-221ENST00000532443 MS4A4AQ96JQ5 239 aa10.91□□□□□ -0.66
PPFIA1-221ENST00000532443 NLRP6P59044 892 aa10.9□□□□□ -0.66
PPFIA1-221ENST00000532443 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
PPFIA1-221ENST00000532443 OTUD5Q96G74 571 aa10.9□□□□□ -0.66
PPFIA1-221ENST00000532443 NKX1-1Q15270 411 aaPredicted RBP10.88□□□□□ -0.67
PPFIA1-221ENST00000532443 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
PPFIA1-221ENST00000532443 SCUBE2Q9NQ36 999 aa10.87□□□□□ -0.67
PPFIA1-221ENST00000532443 G3V3G9 751 aa10.86□□□□□ -0.67
PPFIA1-221ENST00000532443 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
PPFIA1-221ENST00000532443 BOLA1Q9Y3E2 137 aa10.85□□□□□ -0.67
PPFIA1-221ENST00000532443 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
PPFIA1-221ENST00000532443 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
PPFIA1-221ENST00000532443 PPP1R37O75864 691 aa10.8□□□□□ -0.68
PPFIA1-221ENST00000532443 MICALL2Q8IY33 904 aa10.79□□□□□ -0.68
PPFIA1-221ENST00000532443 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
PPFIA1-221ENST00000532443 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
PPFIA1-221ENST00000532443 DNAJC5Q9H3Z4 198 aa10.78□□□□□ -0.68
PPFIA1-221ENST00000532443 BBXQ8WY36 941 aaPredicted RBP10.74□□□□□ -0.69
PPFIA1-221ENST00000532443 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
PPFIA1-221ENST00000532443 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
PPFIA1-221ENST00000532443 RYDENQ9NUL5 291 aaKnown RBP10.69□□□□□ -0.7
PPFIA1-221ENST00000532443 TMEM92Q6UXU6 159 aa10.68□□□□□ -0.7
PPFIA1-221ENST00000532443 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
PPFIA1-221ENST00000532443 CFAP44Q96MT7 982 aa10.67□□□□□ -0.7
PPFIA1-221ENST00000532443 PAXIP1Q6ZW49 1069 aaPredicted RBP10.66□□□□□ -0.7
PPFIA1-221ENST00000532443 SPRYD3Q8NCJ5 442 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms