RNA–Protein interactions for RNA: ENST00000531771.5

PICALM-216, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-216ENST00000531771 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
PICALM-216ENST00000531771 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
PICALM-216ENST00000531771 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
PICALM-216ENST00000531771 KIF12Q96FN5 646 aa13.08□□□□□ -0.32
PICALM-216ENST00000531771 C7P10643 843 aa13.07□□□□□ -0.32
PICALM-216ENST00000531771 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
PICALM-216ENST00000531771 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
PICALM-216ENST00000531771 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
PICALM-216ENST00000531771 MIER1Q8N108 512 aa13□□□□□ -0.33
PICALM-216ENST00000531771 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
PICALM-216ENST00000531771 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
PICALM-216ENST00000531771 MAP3K13O43283 966 aa12.97□□□□□ -0.33
PICALM-216ENST00000531771 BMP2KQ9NSY1 1161 aaPredicted RBP12.97□□□□□ -0.33
PICALM-216ENST00000531771 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
PICALM-216ENST00000531771 TIE1P35590 1138 aa12.93□□□□□ -0.34
PICALM-216ENST00000531771 POTEMA6NI47 508 aa12.92□□□□□ -0.34
PICALM-216ENST00000531771 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
PICALM-216ENST00000531771 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
PICALM-216ENST00000531771 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
PICALM-216ENST00000531771 NUBP1P53384 320 aa12.87□□□□□ -0.35
PICALM-216ENST00000531771 PLCD3Q8N3E9 789 aa12.87□□□□□ -0.35
PICALM-216ENST00000531771 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
PICALM-216ENST00000531771 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
PICALM-216ENST00000531771 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
PICALM-216ENST00000531771 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
PICALM-216ENST00000531771 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
PICALM-216ENST00000531771 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
PICALM-216ENST00000531771 PCDHB13Q9Y5F0 798 aa12.79□□□□□ -0.36
PICALM-216ENST00000531771 IER5LQ5T953 404 aa12.76□□□□□ -0.37
PICALM-216ENST00000531771 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
PICALM-216ENST00000531771 FKBP8Q14318 412 aa12.75□□□□□ -0.37
PICALM-216ENST00000531771 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
PICALM-216ENST00000531771 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
PICALM-216ENST00000531771 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
PICALM-216ENST00000531771 SEC24BO95487 1268 aa12.7□□□□□ -0.38
PICALM-216ENST00000531771 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
PICALM-216ENST00000531771 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
PICALM-216ENST00000531771 TMEM106CQ9BVX2 250 aa12.65□□□□□ -0.38
PICALM-216ENST00000531771 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
PICALM-216ENST00000531771 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
PICALM-216ENST00000531771 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
PICALM-216ENST00000531771 PYGBP11216 843 aa12.55□□□□□ -0.4
PICALM-216ENST00000531771 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
PICALM-216ENST00000531771 PLCG2P16885 1265 aa12.54□□□□□ -0.4
PICALM-216ENST00000531771 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
PICALM-216ENST00000531771 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
PICALM-216ENST00000531771 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
PICALM-216ENST00000531771 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
PICALM-216ENST00000531771 ST18O60284 1047 aa12.46□□□□□ -0.41
PICALM-216ENST00000531771 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
PICALM-216ENST00000531771 CDAN1Q8IWY9 1227 aa12.42□□□□□ -0.42
PICALM-216ENST00000531771 GSE1Q14687 1217 aa12.4□□□□□ -0.42
PICALM-216ENST00000531771 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
PICALM-216ENST00000531771 PDCD7Q8N8D1 485 aaKnown RBP12.39□□□□□ -0.43
PICALM-216ENST00000531771 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
PICALM-216ENST00000531771 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
PICALM-216ENST00000531771 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
PICALM-216ENST00000531771 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
PICALM-216ENST00000531771 SNPHO15079 494 aa12.29□□□□□ -0.44
PICALM-216ENST00000531771 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
PICALM-216ENST00000531771 PSEN1P49768 467 aa12.27□□□□□ -0.45
PICALM-216ENST00000531771 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.45
PICALM-216ENST00000531771 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
PICALM-216ENST00000531771 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
PICALM-216ENST00000531771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.453e-9■■■□□ 15
PICALM-216ENST00000531771 C3orf67Q6ZVT6 689 aa12.22□□□□□ -0.45
PICALM-216ENST00000531771 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
PICALM-216ENST00000531771 PDAP1Q13442 181 aaKnown RBP12.21□□□□□ -0.45
PICALM-216ENST00000531771 MARVELD3Q96A59 401 aa12.2□□□□□ -0.46
PICALM-216ENST00000531771 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
PICALM-216ENST00000531771 SPNS2Q8IVW8 549 aa12.16□□□□□ -0.46
PICALM-216ENST00000531771 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
PICALM-216ENST00000531771 MMRN1Q13201 1228 aa12.13□□□□□ -0.47
PICALM-216ENST00000531771 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
PICALM-216ENST00000531771 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
PICALM-216ENST00000531771 EMP3P54852 163 aa12.09□□□□□ -0.47
PICALM-216ENST00000531771 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
PICALM-216ENST00000531771 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
PICALM-216ENST00000531771 BOLA1Q9Y3E2 137 aa12.07□□□□□ -0.48
PICALM-216ENST00000531771 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
PICALM-216ENST00000531771 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
PICALM-216ENST00000531771 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
PICALM-216ENST00000531771 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
PICALM-216ENST00000531771 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
PICALM-216ENST00000531771 TRIM41Q8WV44 630 aa12□□□□□ -0.49
PICALM-216ENST00000531771 G3V3G9 751 aa11.98□□□□□ -0.49
PICALM-216ENST00000531771 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
PICALM-216ENST00000531771 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
PICALM-216ENST00000531771 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
PICALM-216ENST00000531771 DOK7Q18PE1 504 aa11.89□□□□□ -0.51
PICALM-216ENST00000531771 TMEM92Q6UXU6 159 aa11.88□□□□□ -0.51
PICALM-216ENST00000531771 MICALL2Q8IY33 904 aa11.88□□□□□ -0.51
PICALM-216ENST00000531771 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
PICALM-216ENST00000531771 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
PICALM-216ENST00000531771 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
PICALM-216ENST00000531771 SOX12O15370 315 aa11.84□□□□□ -0.51
PICALM-216ENST00000531771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.82□□□□□ -0.52
PICALM-216ENST00000531771 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
PICALM-216ENST00000531771 ERBB3P21860 1342 aa11.81□□□□□ -0.52
PICALM-216ENST00000531771 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms