RNA–Protein interactions for RNA: ENST00000531049.1

LINC01559-203, Transcript of long intergenic non-protein coding RNA 1559, humanhuman

TSL 3 BASIC

Gene LINC01559, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559-203ENST00000531049 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
LINC01559-203ENST00000531049 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
LINC01559-203ENST00000531049 HMGXB3Q12766 1538 aa13.86□□□□□ -0.19
LINC01559-203ENST00000531049 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
LINC01559-203ENST00000531049 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
LINC01559-203ENST00000531049 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.2
LINC01559-203ENST00000531049 STAG3Q9UJ98 1225 aa13.8□□□□□ -0.2
LINC01559-203ENST00000531049 CUX2O14529 1486 aa13.8□□□□□ -0.2
LINC01559-203ENST00000531049 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
LINC01559-203ENST00000531049 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
LINC01559-203ENST00000531049 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
LINC01559-203ENST00000531049 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
LINC01559-203ENST00000531049 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
LINC01559-203ENST00000531049 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
LINC01559-203ENST00000531049 MROH2BQ7Z745 1585 aa13.71□□□□□ -0.22
LINC01559-203ENST00000531049 NESP48681 1621 aa13.7□□□□□ -0.22
LINC01559-203ENST00000531049 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
LINC01559-203ENST00000531049 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
LINC01559-203ENST00000531049 LAMC3Q9Y6N6 1575 aa13.64□□□□□ -0.23
LINC01559-203ENST00000531049 PLSCR2Q9NRY7 297 aa13.64□□□□□ -0.23
LINC01559-203ENST00000531049 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
LINC01559-203ENST00000531049 NPM1P06748 294 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC01559-203ENST00000531049 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.23
LINC01559-203ENST00000531049 OTUD5Q96G74 571 aa13.57□□□□□ -0.24
LINC01559-203ENST00000531049 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
LINC01559-203ENST00000531049 POTEB2H3BUK9 544 aa13.55□□□□□ -0.24
LINC01559-203ENST00000531049 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
LINC01559-203ENST00000531049 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
LINC01559-203ENST00000531049 WIZO95785 1651 aa13.52□□□□□ -0.25
LINC01559-203ENST00000531049 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
LINC01559-203ENST00000531049 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
LINC01559-203ENST00000531049 MS4A3Q96HJ5 214 aa13.45□□□□□ -0.26
LINC01559-203ENST00000531049 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
LINC01559-203ENST00000531049 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
LINC01559-203ENST00000531049 WDR62O43379 1518 aa13.42□□□□□ -0.26
LINC01559-203ENST00000531049 METRNQ9UJH8 293 aa13.41□□□□□ -0.26
LINC01559-203ENST00000531049 POTEMA6NI47 508 aa13.39□□□□□ -0.27
LINC01559-203ENST00000531049 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
LINC01559-203ENST00000531049 CFTRP13569 1480 aa13.38□□□□□ -0.27
LINC01559-203ENST00000531049 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
LINC01559-203ENST00000531049 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
LINC01559-203ENST00000531049 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
LINC01559-203ENST00000531049 ATMINO43313 823 aaPredicted RBP13.37□□□□□ -0.27
LINC01559-203ENST00000531049 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
LINC01559-203ENST00000531049 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
LINC01559-203ENST00000531049 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
LINC01559-203ENST00000531049 C7P10643 843 aa13.33□□□□□ -0.28
LINC01559-203ENST00000531049 POTEJP0CG39 1038 aa13.29□□□□□ -0.28
LINC01559-203ENST00000531049 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
LINC01559-203ENST00000531049 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
LINC01559-203ENST00000531049 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
LINC01559-203ENST00000531049 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
LINC01559-203ENST00000531049 PROM2Q8N271 834 aa13.24□□□□□ -0.29
LINC01559-203ENST00000531049 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
LINC01559-203ENST00000531049 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
LINC01559-203ENST00000531049 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
LINC01559-203ENST00000531049 SCUBE2Q9NQ36 999 aa13.18□□□□□ -0.3
LINC01559-203ENST00000531049 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
LINC01559-203ENST00000531049 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
LINC01559-203ENST00000531049 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
LINC01559-203ENST00000531049 MIER1Q8N108 512 aa13.15□□□□□ -0.3
LINC01559-203ENST00000531049 MAP3K13O43283 966 aa13.14□□□□□ -0.31
LINC01559-203ENST00000531049 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
LINC01559-203ENST00000531049 IFT140Q96RY7 1462 aa13.12□□□□□ -0.31
LINC01559-203ENST00000531049 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
LINC01559-203ENST00000531049 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
LINC01559-203ENST00000531049 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
LINC01559-203ENST00000531049 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
LINC01559-203ENST00000531049 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
LINC01559-203ENST00000531049 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
LINC01559-203ENST00000531049 LCE2DQ5TA82 110 aaPredicted RBP13.1□□□□□ -0.31
LINC01559-203ENST00000531049 TIE1P35590 1138 aa13.09□□□□□ -0.31
LINC01559-203ENST00000531049 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
LINC01559-203ENST00000531049 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
LINC01559-203ENST00000531049 SEC24BO95487 1268 aa13.04□□□□□ -0.32
LINC01559-203ENST00000531049 TTLL13PA6NNM8 815 aa13.03□□□□□ -0.32
LINC01559-203ENST00000531049 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
LINC01559-203ENST00000531049 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
LINC01559-203ENST00000531049 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
LINC01559-203ENST00000531049 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
LINC01559-203ENST00000531049 POLA1P09884 1462 aaPredicted RBP12.98□□□□□ -0.33
LINC01559-203ENST00000531049 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
LINC01559-203ENST00000531049 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
LINC01559-203ENST00000531049 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
LINC01559-203ENST00000531049 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
LINC01559-203ENST00000531049 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
LINC01559-203ENST00000531049 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
LINC01559-203ENST00000531049 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
LINC01559-203ENST00000531049 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
LINC01559-203ENST00000531049 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
LINC01559-203ENST00000531049 SOGA1O94964 1423 aa12.91□□□□□ -0.34
LINC01559-203ENST00000531049 IER5LQ5T953 404 aa12.91□□□□□ -0.34
LINC01559-203ENST00000531049 CHD1O14646 1710 aa12.9□□□□□ -0.34
LINC01559-203ENST00000531049 FGD5Q6ZNL6 1462 aa12.9□□□□□ -0.34
LINC01559-203ENST00000531049 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
LINC01559-203ENST00000531049 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
LINC01559-203ENST00000531049 CUX1P39880 1505 aa12.88□□□□□ -0.35
LINC01559-203ENST00000531049 NUBP1P53384 320 aa12.88□□□□□ -0.35
LINC01559-203ENST00000531049 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
LINC01559-203ENST00000531049 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms