RNA–Protein interactions for RNA: ENST00000530843.1

NUP214-223, Transcript of nucleoporin 214, human

TSL 5

Gene NUP214, Length 189 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP214-223	ENST00000530843	PHF12	Q96QT6	1004 aa		11.25	□□□□□ -0.61
NUP214-223	ENST00000530843	ZNF579	Q8NAF0	562 aa	Known RBP	11.24	□□□□□ -0.61
NUP214-223	ENST00000530843	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.24	□□□□□ -0.61
NUP214-223	ENST00000530843	GSE1	Q14687	1217 aa		11.23	□□□□□ -0.61
NUP214-223	ENST00000530843	SP7	Q8TDD2	431 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP214-223	ENST00000530843	PYGB	P11216	843 aa		11.18	□□□□□ -0.62
NUP214-223	ENST00000530843	PKD2	Q13563	968 aa		11.18	□□□□□ -0.62
NUP214-223	ENST00000530843	KIF12	Q96FN5	646 aa		11.16	□□□□□ -0.62
NUP214-223	ENST00000530843	MAP3K13	O43283	966 aa		11.14	□□□□□ -0.63
NUP214-223	ENST00000530843	GABBR2	O75899	941 aa		11.13	□□□□□ -0.63
NUP214-223	ENST00000530843	GALR2	O43603	387 aa	Predicted RBP	11.11	□□□□□ -0.63
NUP214-223	ENST00000530843	CHRM1	P11229	460 aa	Predicted RBP	11.11	□□□□□ -0.63
NUP214-223	ENST00000530843	MS4A3	Q96HJ5	214 aa		11.11	□□□□□ -0.63
NUP214-223	ENST00000530843	RTN4	Q9NQC3	1192 aa	Known RBP	11.11	□□□□□ -0.63
NUP214-223	ENST00000530843	ECM2	O94769	699 aa	Predicted RBP	11.08	□□□□□ -0.64
NUP214-223	ENST00000530843	TRIM41	Q8WV44	630 aa		11.07	□□□□□ -0.64
NUP214-223	ENST00000530843	RNF25	Q96BH1	459 aa	Predicted RBP	11.07	□□□□□ -0.64
NUP214-223	ENST00000530843	PCDHB13	Q9Y5F0	798 aa		11.07	□□□□□ -0.64
NUP214-223	ENST00000530843	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.06	□□□□□ -0.64
NUP214-223	ENST00000530843	IFNL1	Q8IU54	200 aa		11.06	□□□□□ -0.64
NUP214-223	ENST00000530843	PCDHB8	Q9UN66	801 aa		11.05	□□□□□ -0.64
NUP214-223	ENST00000530843	TRPC6	Q9Y210	931 aa		11.05	□□□□□ -0.64
NUP214-223	ENST00000530843	SGIP1	Q9BQI5	828 aa		11.04	□□□□□ -0.64
NUP214-223	ENST00000530843	RGL2	O15211	777 aa		11.03	□□□□□ -0.64
NUP214-223	ENST00000530843	CLCN6	P51797	869 aa		11.03	□□□□□ -0.64
NUP214-223	ENST00000530843	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.97	□□□□□ -0.65
NUP214-223	ENST00000530843	RIOK3	O14730	519 aa	Known RBP	10.95	□□□□□ -0.66
NUP214-223	ENST00000530843	POTEI	P0CG38	1075 aa		10.95	□□□□□ -0.66
NUP214-223	ENST00000530843	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.93	□□□□□ -0.66
NUP214-223	ENST00000530843	TIE1	P35590	1138 aa		10.9	□□□□□ -0.66
NUP214-223	ENST00000530843	PSEN1	P49768	467 aa		10.9	□□□□□ -0.66
NUP214-223	ENST00000530843	TTLL13P	A6NNM8	815 aa		10.89	□□□□□ -0.67
NUP214-223	ENST00000530843	ATMIN	O43313	823 aa	Predicted RBP	10.89	□□□□□ -0.67
NUP214-223	ENST00000530843	DCBLD2	Q96PD2	775 aa		10.89	□□□□□ -0.67
NUP214-223	ENST00000530843	VGF	O15240	615 aa	Predicted RBP	10.88	□□□□□ -0.67
NUP214-223	ENST00000530843	PDAP1	Q13442	181 aa	Known RBP	10.88	□□□□□ -0.67
NUP214-223	ENST00000530843	ASTL	Q6HA08	431 aa	Predicted RBP	10.88	□□□□□ -0.67
NUP214-223	ENST00000530843	TMEM106C	Q9BVX2	250 aa		10.88	□□□□□ -0.67
NUP214-223	ENST00000530843	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.87	□□□□□ -0.67
NUP214-223	ENST00000530843	ATN1	P54259	1190 aa	Predicted RBP	10.87	□□□□□ -0.67
NUP214-223	ENST00000530843	PELP1	Q8IZL8	1130 aa	Known RBP	10.87	□□□□□ -0.67
NUP214-223	ENST00000530843	ZFP91	Q96JP5	570 aa	Predicted RBP	10.87	□□□□□ -0.67
NUP214-223	ENST00000530843	TRIM35	Q9UPQ4	493 aa		10.81	□□□□□ -0.68
NUP214-223	ENST00000530843	DCAF8L2	P0C7V8	631 aa		10.79	□□□□□ -0.68
NUP214-223	ENST00000530843	STK25	O00506	426 aa		10.78	□□□□□ -0.68
NUP214-223	ENST00000530843	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.78	□□□□□ -0.68
NUP214-223	ENST00000530843	TAOK2	Q9UL54	1235 aa		10.78	□□□□□ -0.68
NUP214-223	ENST00000530843	CABP2	Q9NPB3	220 aa		10.77	□□□□□ -0.69
NUP214-223	ENST00000530843	STK24	Q9Y6E0	443 aa		10.76	□□□□□ -0.69
NUP214-223	ENST00000530843	CHGA	P10645	457 aa	Known RBP	10.75	□□□□□ -0.69
NUP214-223	ENST00000530843	HS6ST3	Q8IZP7	471 aa		10.75	□□□□□ -0.69
NUP214-223	ENST00000530843	EFCAB3	Q8N7B9	438 aa		10.72	□□□□□ -0.69
NUP214-223	ENST00000530843	POTEF	A5A3E0	1075 aa		10.71	□□□□□ -0.69
NUP214-223	ENST00000530843	SLC39A7	Q92504	469 aa		10.7	□□□□□ -0.7
NUP214-223	ENST00000530843	METRN	Q9UJH8	293 aa		10.7	□□□□□ -0.7
NUP214-223	ENST00000530843	GOLGA2	Q08379	1002 aa		10.68	□□□□□ -0.7
NUP214-223	ENST00000530843	COLQ	Q9Y215	455 aa	Predicted RBP	10.68	□□□□□ -0.7
NUP214-223	ENST00000530843	C7	P10643	843 aa		10.67	□□□□□ -0.7
NUP214-223	ENST00000530843	IRX5	P78411	483 aa	Predicted RBP	10.67	□□□□□ -0.7
NUP214-223	ENST00000530843	MKRN3	Q13064	507 aa	Known RBP	10.67	□□□□□ -0.7
NUP214-223	ENST00000530843	IER5L	Q5T953	404 aa		10.67	□□□□□ -0.7
NUP214-223	ENST00000530843	NKX1-1	Q15270	411 aa	Predicted RBP	10.65	□□□□□ -0.7
NUP214-223	ENST00000530843	DNAJC5	Q9H3Z4	198 aa		10.64	□□□□□ -0.71
NUP214-223	ENST00000530843	PHF8	Q9UPP1	1060 aa		10.64	□□□□□ -0.71
NUP214-223	ENST00000530843	ILDR1	Q86SU0	546 aa	Predicted RBP	10.63	□□□□□ -0.71
NUP214-223	ENST00000530843	MFRP	Q9BY79	579 aa		10.63	□□□□□ -0.71
NUP214-223	ENST00000530843	POTEB2	H3BUK9	544 aa		10.62	□□□□□ -0.71
NUP214-223	ENST00000530843	SOX12	O15370	315 aa		10.62	□□□□□ -0.71
NUP214-223	ENST00000530843	PDCD7	Q8N8D1	485 aa	Known RBP	10.62	□□□□□ -0.71
NUP214-223	ENST00000530843	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.62	□□□□□ -0.71	2e-8	■■■□□ 15.6
NUP214-223	ENST00000530843	SEC24B	O95487	1268 aa		10.6	□□□□□ -0.71
NUP214-223	ENST00000530843	FBXO22	Q8NEZ5	403 aa		10.6	□□□□□ -0.71
NUP214-223	ENST00000530843	MS4A4A	Q96JQ5	239 aa		10.6	□□□□□ -0.71
NUP214-223	ENST00000530843	OCEL1	Q9H607	264 aa		10.6	□□□□□ -0.71
NUP214-223	ENST00000530843	PLCG2	P16885	1265 aa		10.59	□□□□□ -0.71
NUP214-223	ENST00000530843	DPY19L2	Q6NUT2	758 aa		10.58	□□□□□ -0.72
NUP214-223	ENST00000530843	POTEJ	P0CG39	1038 aa		10.56	□□□□□ -0.72
NUP214-223	ENST00000530843	BBX	Q8WY36	941 aa	Predicted RBP	10.56	□□□□□ -0.72
NUP214-223	ENST00000530843	NLRP6	P59044	892 aa		10.55	□□□□□ -0.72
NUP214-223	ENST00000530843	GTPBP6	O43824	516 aa	Predicted RBP	10.52	□□□□□ -0.73
NUP214-223	ENST00000530843	PPP1R37	O75864	691 aa		10.51	□□□□□ -0.73
NUP214-223	ENST00000530843	LHX8	Q68G74	356 aa		10.5	□□□□□ -0.73
NUP214-223	ENST00000530843	BOLA1	Q9Y3E2	137 aa		10.45	□□□□□ -0.74
NUP214-223	ENST00000530843	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.43	□□□□□ -0.74
NUP214-223	ENST00000530843	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.43	□□□□□ -0.74
NUP214-223	ENST00000530843	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.43	□□□□□ -0.74
NUP214-223	ENST00000530843	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.42	□□□□□ -0.74
NUP214-223	ENST00000530843	MICALL2	Q8IY33	904 aa		10.42	□□□□□ -0.74
NUP214-223	ENST00000530843	OTUD5	Q96G74	571 aa		10.42	□□□□□ -0.74
NUP214-223	ENST00000530843	SPRYD3	Q8NCJ5	442 aa		10.41	□□□□□ -0.74
NUP214-223	ENST00000530843	CFAP44	Q96MT7	982 aa		10.41	□□□□□ -0.74
NUP214-223	ENST00000530843	RYDEN	Q9NUL5	291 aa	Known RBP	10.4	□□□□□ -0.74
NUP214-223	ENST00000530843		G3V3G9	751 aa		10.35	□□□□□ -0.75
NUP214-223	ENST00000530843	SCUBE2	Q9NQ36	999 aa		10.35	□□□□□ -0.75
NUP214-223	ENST00000530843	TMEM92	Q6UXU6	159 aa		10.34	□□□□□ -0.75
NUP214-223	ENST00000530843	MAMSTR	Q6ZN01	415 aa		10.34	□□□□□ -0.75
NUP214-223	ENST00000530843	C3orf67	Q6ZVT6	689 aa		10.33	□□□□□ -0.76
NUP214-223	ENST00000530843	PLCB2	Q00722	1185 aa		10.32	□□□□□ -0.76
NUP214-223	ENST00000530843	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.32	□□□□□ -0.76
NUP214-223	ENST00000530843	CADPS2	Q86UW7	1296 aa		10.31	□□□□□ -0.76

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