RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 B4GALNT3Q6L9W6 998 aa12.36□□□□□ -0.43
CAPRIN1-209ENST00000530820 CHMP4BQ9H444 224 aaKnown RBP12.35□□□□□ -0.43
CAPRIN1-209ENST00000530820 ZBTB47Q9UFB7 747 aaPredicted RBP12.34□□□□□ -0.43
CAPRIN1-209ENST00000530820 CNGB1Q14028 1251 aaPredicted RBP12.33□□□□□ -0.44
CAPRIN1-209ENST00000530820 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
CAPRIN1-209ENST00000530820 HIRIP3Q9BW71 556 aaPredicted RBP12.31□□□□□ -0.44
CAPRIN1-209ENST00000530820 RGS3P49796 1198 aa12.31□□□□□ -0.44
CAPRIN1-209ENST00000530820 FANCIQ9NVI1 1328 aa12.3□□□□□ -0.44
CAPRIN1-209ENST00000530820 HSP90AA2PQ14568 343 aaPredicted RBP12.3□□□□□ -0.44
CAPRIN1-209ENST00000530820 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
CAPRIN1-209ENST00000530820 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
CAPRIN1-209ENST00000530820 DDX10Q13206 875 aaKnown RBP12.22□□□□□ -0.45
CAPRIN1-209ENST00000530820 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
CAPRIN1-209ENST00000530820 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
CAPRIN1-209ENST00000530820 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
CAPRIN1-209ENST00000530820 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
CAPRIN1-209ENST00000530820 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
CAPRIN1-209ENST00000530820 VGLL3A8MV65 326 aa12.17□□□□□ -0.46
CAPRIN1-209ENST00000530820 FOXD1Q16676 465 aa12.16□□□□□ -0.46
CAPRIN1-209ENST00000530820 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-209ENST00000530820 NAP1L2Q9ULW6 460 aaPredicted RBP12.14□□□□□ -0.47
CAPRIN1-209ENST00000530820 ZHX1Q9UKY1 873 aaPredicted RBP12.13□□□□□ -0.47
CAPRIN1-209ENST00000530820 FRAT1Q92837 279 aaPredicted RBP12.12□□□□□ -0.47
CAPRIN1-209ENST00000530820 HNRNPUQ00839 825 aaKnown RBP eCLIP12.11□□□□□ -0.47
CAPRIN1-209ENST00000530820 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
CAPRIN1-209ENST00000530820 IPO9Q96P70 1041 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-209ENST00000530820 GSE1Q14687 1217 aa12.05□□□□□ -0.48
CAPRIN1-209ENST00000530820 DCAF11Q8TEB1 546 aa12.04□□□□□ -0.48
CAPRIN1-209ENST00000530820 ZBTB7CA1YPR0 619 aa12.03□□□□□ -0.48
CAPRIN1-209ENST00000530820 E9PSI1 815 aa12.03□□□□□ -0.48
CAPRIN1-209ENST00000530820 CHMP4AQ9BY43 222 aa12.03□□□□□ -0.48
CAPRIN1-209ENST00000530820 RRAGDQ9NQL2 400 aaPredicted RBP12.01□□□□□ -0.49
CAPRIN1-209ENST00000530820 TAF7LQ5H9L4 462 aa12.01□□□□□ -0.49
CAPRIN1-209ENST00000530820 PNNQ9H307 717 aaKnown RBP12□□□□□ -0.49
CAPRIN1-209ENST00000530820 CANXP27824 592 aaKnown RBP11.96□□□□□ -0.49
CAPRIN1-209ENST00000530820 SKAP1Q86WV1 359 aa11.95□□□□□ -0.5
CAPRIN1-209ENST00000530820 CERS3Q8IU89 383 aa11.94□□□□□ -0.5
CAPRIN1-209ENST00000530820 GZF1Q9H116 711 aaPredicted RBP11.93□□□□□ -0.5
CAPRIN1-209ENST00000530820 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-209ENST00000530820 NFKBIBQ15653 356 aa11.9□□□□□ -0.5
CAPRIN1-209ENST00000530820 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
CAPRIN1-209ENST00000530820 AEBP1Q8IUX7 1158 aa11.9□□□□□ -0.51
CAPRIN1-209ENST00000530820 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.51
CAPRIN1-209ENST00000530820 FRAT2O75474 233 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-209ENST00000530820 ZFP91Q96JP5 570 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-209ENST00000530820 FAM13BQ9NYF5 915 aa11.88□□□□□ -0.51
CAPRIN1-209ENST00000530820 RRP9O43818 475 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-209ENST00000530820 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
CAPRIN1-209ENST00000530820 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
CAPRIN1-209ENST00000530820 ZBTB22O15209 634 aa11.87□□□□□ -0.51
CAPRIN1-209ENST00000530820 P3H3Q8IVL6 736 aa11.87□□□□□ -0.51
CAPRIN1-209ENST00000530820 ZBTB9Q96C00 473 aa11.87□□□□□ -0.51
CAPRIN1-209ENST00000530820 ANP32CO43423 234 aa11.86□□□□□ -0.51
CAPRIN1-209ENST00000530820 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
CAPRIN1-209ENST00000530820 STAC3Q96MF2 364 aa11.83□□□□□ -0.52
CAPRIN1-209ENST00000530820 ZNF526Q8TF50 670 aaPredicted RBP11.83□□□□□ -0.52
CAPRIN1-209ENST00000530820 WASHC2CQ9Y4E1 1318 aa11.82□□□□□ -0.52
CAPRIN1-209ENST00000530820 IGSF3O75054 1194 aa11.82□□□□□ -0.52
CAPRIN1-209ENST00000530820 ANP32BQ92688 251 aaKnown RBP11.82□□□□□ -0.52
CAPRIN1-209ENST00000530820 ZNF830Q96NB3 372 aaPredicted RBP11.81□□□□□ -0.52
CAPRIN1-209ENST00000530820 PPM1GO15355 546 aaPredicted RBP11.8□□□□□ -0.52
CAPRIN1-209ENST00000530820 POGKQ9P215 609 aa11.8□□□□□ -0.52
CAPRIN1-209ENST00000530820 PRDM4Q9UKN5 801 aa11.79□□□□□ -0.52
CAPRIN1-209ENST00000530820 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
CAPRIN1-209ENST00000530820 CHMP4CQ96CF2 233 aa11.79□□□□□ -0.52
CAPRIN1-209ENST00000530820 SECISBP2LQ93073 1101 aaKnown RBP11.78□□□□□ -0.52
CAPRIN1-209ENST00000530820 CDK11BP21127 795 aaKnown RBP11.77□□□□□ -0.52
CAPRIN1-209ENST00000530820 PANK2Q9BZ23 570 aa11.77□□□□□ -0.52
CAPRIN1-209ENST00000530820 UBTFP17480 764 aaKnown RBP11.77□□□□□ -0.53
CAPRIN1-209ENST00000530820 SLKQ9H2G2 1235 aaPredicted RBP11.75□□□□□ -0.53
CAPRIN1-209ENST00000530820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-209ENST00000530820 TULP1O00294 542 aaPredicted RBP11.72□□□□□ -0.53
CAPRIN1-209ENST00000530820 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
CAPRIN1-209ENST00000530820 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
CAPRIN1-209ENST00000530820 DNTTIP2Q5QJE6 756 aaKnown RBP11.7□□□□□ -0.54
CAPRIN1-209ENST00000530820 IPO4Q8TEX9 1081 aaKnown RBP11.68□□□□□ -0.54
CAPRIN1-209ENST00000530820 PDE4AP27815 886 aa11.68□□□□□ -0.54
CAPRIN1-209ENST00000530820 CNPY4Q8N129 248 aa11.68□□□□□ -0.54
CAPRIN1-209ENST00000530820 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
CAPRIN1-209ENST00000530820 TRERF1Q96PN7 1200 aa11.66□□□□□ -0.54
CAPRIN1-209ENST00000530820 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
CAPRIN1-209ENST00000530820 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
CAPRIN1-209ENST00000530820 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.55
CAPRIN1-209ENST00000530820 CGNQ9P2M7 1197 aaKnown RBP11.64□□□□□ -0.55
CAPRIN1-209ENST00000530820 CCDC184Q52MB2 194 aa11.64□□□□□ -0.55
CAPRIN1-209ENST00000530820 CALD1Q05682 793 aaKnown RBP11.63□□□□□ -0.55
CAPRIN1-209ENST00000530820 BRD2P25440 801 aaKnown RBP11.63□□□□□ -0.55
CAPRIN1-209ENST00000530820 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
CAPRIN1-209ENST00000530820 TRIM44Q96DX7 344 aaPredicted RBP11.62□□□□□ -0.55
CAPRIN1-209ENST00000530820 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
CAPRIN1-209ENST00000530820 TMC1Q8TDI8 760 aa11.62□□□□□ -0.55
CAPRIN1-209ENST00000530820 SOX12O15370 315 aa11.61□□□□□ -0.55
CAPRIN1-209ENST00000530820 FTSJ3Q8IY81 847 aaKnown RBP11.61□□□□□ -0.55
CAPRIN1-209ENST00000530820 R3HCC1Q9Y3T6 440 aaKnown RBP11.61□□□□□ -0.55
CAPRIN1-209ENST00000530820 CBX1P83916 185 aa11.61□□□□□ -0.55
CAPRIN1-209ENST00000530820 PPP4R3BQ5MIZ7 849 aa11.59□□□□□ -0.55
CAPRIN1-209ENST00000530820 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
CAPRIN1-209ENST00000530820 APPP05067 770 aa11.58□□□□□ -0.56
CAPRIN1-209ENST00000530820 KCNG1Q9UIX4 513 aa11.58□□□□□ -0.56
CAPRIN1-209ENST00000530820 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms