RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 RIOK3O14730 519 aaKnown RBP4.16□□□□□ -1.74
FGFR1-235ENST00000530701 ERICH6Q7L0X2 663 aa4.16□□□□□ -1.74
FGFR1-235ENST00000530701 STK25O00506 426 aa4.15□□□□□ -1.75
FGFR1-235ENST00000530701 FAM212AQ96EL1 285 aa4.15□□□□□ -1.75
FGFR1-235ENST00000530701 DNAJC5Q9H3Z4 198 aa4.15□□□□□ -1.75
FGFR1-235ENST00000530701 VGFO15240 615 aaPredicted RBP4.13□□□□□ -1.75
FGFR1-235ENST00000530701 P3H3Q8IVL6 736 aa4.13□□□□□ -1.75
FGFR1-235ENST00000530701 TULP1O00294 542 aaPredicted RBP4.11□□□□□ -1.75
FGFR1-235ENST00000530701 RNF25Q96BH1 459 aaPredicted RBP4.11□□□□□ -1.75
FGFR1-235ENST00000530701 WDR70Q9NW82 654 aa4.11□□□□□ -1.75
FGFR1-235ENST00000530701 GTF3C3Q9Y5Q9 886 aa4.11□□□□□ -1.75
FGFR1-235ENST00000530701 STK24Q9Y6E0 443 aa4.11□□□□□ -1.75
FGFR1-235ENST00000530701 GTPBP6O43824 516 aaPredicted RBP4.1□□□□□ -1.75
FGFR1-235ENST00000530701 SPDYE1Q8NFV5 336 aaPredicted RBP4.1□□□□□ -1.75
FGFR1-235ENST00000530701 PRR29P0C7W0 189 aa4.09□□□□□ -1.75
FGFR1-235ENST00000530701 NUBP1P53384 320 aa4.09□□□□□ -1.75
FGFR1-235ENST00000530701 NKX1-1Q15270 411 aaPredicted RBP4.09□□□□□ -1.75
FGFR1-235ENST00000530701 BCL11BQ9C0K0 894 aaPredicted RBP4.09□□□□□ -1.75
FGFR1-235ENST00000530701 CLEC11AQ9Y240 323 aa4.09□□□□□ -1.75
FGFR1-235ENST00000530701 TMEM132AQ24JP5 1023 aa4.08□□□□□ -1.76
FGFR1-235ENST00000530701 CHRM1P11229 460 aaPredicted RBP4.07□□□□□ -1.76
FGFR1-235ENST00000530701 RBM42Q9BTD8 480 aaKnown RBP4.07□□□□□ -1.76
FGFR1-235ENST00000530701 TIMELESSQ9UNS1 1208 aa4.07□□□□□ -1.76
FGFR1-235ENST00000530701 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.06□□□□□ -1.76
FGFR1-235ENST00000530701 ZFP91Q96JP5 570 aaPredicted RBP4.06□□□□□ -1.76
FGFR1-235ENST00000530701 SGIP1Q9BQI5 828 aa4.05□□□□□ -1.76
FGFR1-235ENST00000530701 PYGBP11216 843 aa4.04□□□□□ -1.76
FGFR1-235ENST00000530701 C14orf37Q86TY3 774 aa4.04□□□□□ -1.76
FGFR1-235ENST00000530701 AKT1S1Q96B36 256 aa4.04□□□□□ -1.76
FGFR1-235ENST00000530701 ARXQ96QS3 562 aa4.04□□□□□ -1.76
FGFR1-235ENST00000530701 CACNB1Q02641 598 aaPredicted RBP4.03□□□□□ -1.76
FGFR1-235ENST00000530701 RASEFQ8IZ41 740 aa4.03□□□□□ -1.76
FGFR1-235ENST00000530701 CREBZFQ9NS37 354 aa4.03□□□□□ -1.76
FGFR1-235ENST00000530701 LMOD2Q6P5Q4 547 aa4.02□□□□□ -1.77
FGFR1-235ENST00000530701 ZNF467Q7Z7K2 595 aaPredicted RBP4.02□□□□□ -1.77
FGFR1-235ENST00000530701 PDAP1Q13442 181 aaKnown RBP3.99□□□□□ -1.77
FGFR1-235ENST00000530701 KCNV2Q8TDN2 545 aa3.99□□□□□ -1.77
FGFR1-235ENST00000530701 MNX1P50219 401 aaPredicted RBP3.98□□□□□ -1.77
FGFR1-235ENST00000530701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.98□□□□□ -1.77
FGFR1-235ENST00000530701 HOMEZQ8IX15 550 aa3.98□□□□□ -1.77
FGFR1-235ENST00000530701 REM2Q8IYK8 340 aaPredicted RBP3.98□□□□□ -1.77
FGFR1-235ENST00000530701 TSPYL2Q9H2G4 693 aaPredicted RBP3.98□□□□□ -1.77
FGFR1-235ENST00000530701 SMYD5Q6GMV2 418 aa3.97□□□□□ -1.77
FGFR1-235ENST00000530701 ARHGEF1Q92888 912 aaKnown RBP3.97□□□□□ -1.77
FGFR1-235ENST00000530701 NEUROD2Q15784 382 aa3.96□□□□□ -1.78
FGFR1-235ENST00000530701 E2F4Q16254 413 aa3.96□□□□□ -1.78
FGFR1-235ENST00000530701 DAXXQ9UER7 740 aaPredicted RBP3.96□□□□□ -1.78
FGFR1-235ENST00000530701 PAK3O75914 559 aaPredicted RBP3.95□□□□□ -1.78
FGFR1-235ENST00000530701 PSEN1P49768 467 aa3.94□□□□□ -1.78
FGFR1-235ENST00000530701 BRPF1P55201 1214 aaPredicted RBP3.94□□□□□ -1.78
FGFR1-235ENST00000530701 NLRP6P59044 892 aa3.94□□□□□ -1.78
FGFR1-235ENST00000530701 CADPS2Q86UW7 1296 aa3.94□□□□□ -1.78
FGFR1-235ENST00000530701 ZC3H15Q8WU90 426 aaKnown RBP3.94□□□□□ -1.78
FGFR1-235ENST00000530701 PCDHB8Q9UN66 801 aa3.94□□□□□ -1.78
FGFR1-235ENST00000530701 PCDHB13Q9Y5F0 798 aa3.94□□□□□ -1.78
FGFR1-235ENST00000530701 PITPNM1O00562 1244 aa3.92□□□□□ -1.78
FGFR1-235ENST00000530701 GOLGA2Q08379 1002 aa3.92□□□□□ -1.78
FGFR1-235ENST00000530701 ZNF579Q8NAF0 562 aaKnown RBP3.92□□□□□ -1.78
FGFR1-235ENST00000530701 MFRPQ9BY79 579 aa3.92□□□□□ -1.78
FGFR1-235ENST00000530701 SEMA3EO15041 775 aa3.91□□□□□ -1.78
FGFR1-235ENST00000530701 SOX12O15370 315 aa3.91□□□□□ -1.78
FGFR1-235ENST00000530701 SLC24A3Q9HC58 644 aa3.91□□□□□ -1.78
FGFR1-235ENST00000530701 CABP2Q9NPB3 220 aa3.91□□□□□ -1.78
FGFR1-235ENST00000530701 FARP1Q9Y4F1 1045 aaPredicted RBP3.91□□□□□ -1.78
FGFR1-235ENST00000530701 TESPA1A2RU30 521 aaPredicted RBP3.9□□□□□ -1.79
FGFR1-235ENST00000530701 PDE4AP27815 886 aa3.9□□□□□ -1.79
FGFR1-235ENST00000530701 CHADLQ6NUI6 762 aa3.9□□□□□ -1.79
FGFR1-235ENST00000530701 LARP6Q9BRS8 491 aaKnown RBP3.9□□□□□ -1.79
FGFR1-235ENST00000530701 EFCAB3Q8N7B9 438 aa3.89□□□□□ -1.79
FGFR1-235ENST00000530701 KRI1Q8N9T8 703 aaKnown RBP3.89□□□□□ -1.79
FGFR1-235ENST00000530701 SUPT5HO00267 1087 aaKnown RBP3.88□□□□□ -1.79
FGFR1-235ENST00000530701 DDX27Q96GQ7 796 aaKnown RBP3.88□□□□□ -1.79
FGFR1-235ENST00000530701 CCDC61Q9Y6R9 512 aa3.88□□□□□ -1.79
FGFR1-235ENST00000530701 ZMYND10O75800 440 aa3.87□□□□□ -1.79
FGFR1-235ENST00000530701 PPP1R37O75864 691 aa3.87□□□□□ -1.79
FGFR1-235ENST00000530701 IFNL1Q8IU54 200 aa3.87□□□□□ -1.79
FGFR1-235ENST00000530701 GPIHBP1Q8IV16 184 aa3.87□□□□□ -1.79
FGFR1-235ENST00000530701 PHF8Q9UPP1 1060 aa3.87□□□□□ -1.79
FGFR1-235ENST00000530701 PRKAR2AP13861 404 aaKnown RBP3.86□□□□□ -1.79
FGFR1-235ENST00000530701 FBXO22Q8NEZ5 403 aa3.86□□□□□ -1.79
FGFR1-235ENST00000530701 AK7Q96M32 723 aa3.86□□□□□ -1.79
FGFR1-235ENST00000530701 MAP3K13O43283 966 aa3.85□□□□□ -1.79
FGFR1-235ENST00000530701 MKRN3Q13064 507 aaKnown RBP3.84□□□□□ -1.79
FGFR1-235ENST00000530701 BARGINQ6ZT62 677 aa3.84□□□□□ -1.79
FGFR1-235ENST00000530701 NCKAP5LQ9HCH0 1330 aa3.84□□□□□ -1.79
FGFR1-235ENST00000530701 MFSD10Q14728 455 aa3.83□□□□□ -1.8
FGFR1-235ENST00000530701 IL27Q8NEV9 243 aa3.83□□□□□ -1.8
FGFR1-235ENST00000530701 ARIH1Q9Y4X5 557 aaPredicted RBP3.83□□□□□ -1.8
FGFR1-235ENST00000530701 KIF12Q96FN5 646 aa3.82□□□□□ -1.8
FGFR1-235ENST00000530701 CRISPLD2Q9H0B8 497 aa3.82□□□□□ -1.8
FGFR1-235ENST00000530701 RBM26Q5T8P6 1007 aaKnown RBP3.81□□□□□ -1.8
FGFR1-235ENST00000530701 KDM4CQ9H3R0 1056 aa3.81□□□□□ -1.8
FGFR1-235ENST00000530701 GPBP1L1Q9HC44 474 aaPredicted RBP3.81□□□□□ -1.8
FGFR1-235ENST00000530701 SPDYE16A6NNV3 312 aaPredicted RBP3.8□□□□□ -1.8
FGFR1-235ENST00000530701 CAMK2BQ13554 666 aa3.8□□□□□ -1.8
FGFR1-235ENST00000530701 PPP1R15BQ5SWA1 713 aa3.8□□□□□ -1.8
FGFR1-235ENST00000530701 TMEM106CQ9BVX2 250 aa3.8□□□□□ -1.8
FGFR1-235ENST00000530701 ZMYND15Q9H091 742 aa3.8□□□□□ -1.8
FGFR1-235ENST00000530701 RSPH6AQ9H0K4 717 aa3.8□□□□□ -1.8
FGFR1-235ENST00000530701 ZRANB1Q9UGI0 708 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms