RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 CHMP7Q8WUX9 453 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-220ENST00000529526 CLIP1P30622 1438 aa10.86□□□□□ -0.67
CTNND1-220ENST00000529526 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
CTNND1-220ENST00000529526 MYO15BQ96JP2 1530 aa10.84□□□□□ -0.67
CTNND1-220ENST00000529526 KCNH8Q96L42 1107 aa10.83□□□□□ -0.68
CTNND1-220ENST00000529526 A0A0G2JS52 829 aa10.82□□□□□ -0.68
CTNND1-220ENST00000529526 EIF4G2P78344 907 aaKnown RBP eCLIP10.82□□□□□ -0.68
CTNND1-220ENST00000529526 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
CTNND1-220ENST00000529526 C14orf37Q86TY3 774 aa10.8□□□□□ -0.68
CTNND1-220ENST00000529526 MYH16Q9H6N6 1097 aa10.78□□□□□ -0.68
CTNND1-220ENST00000529526 CEP162Q5TB80 1403 aa10.78□□□□□ -0.68
CTNND1-220ENST00000529526 PPP1R15AO75807 674 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-220ENST00000529526 GOLGA3Q08378 1498 aa10.76□□□□□ -0.69
CTNND1-220ENST00000529526 PLEKHD1A6NEE1 506 aa10.72□□□□□ -0.69
CTNND1-220ENST00000529526 RSF1Q96T23 1441 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-220ENST00000529526 PPM1GO15355 546 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-220ENST00000529526 CCDC180Q9P1Z9 1646 aa10.72□□□□□ -0.69
CTNND1-220ENST00000529526 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
CTNND1-220ENST00000529526 SIN3AQ96ST3 1273 aa10.69□□□□□ -0.7
CTNND1-220ENST00000529526 CARD11Q9BXL7 1154 aa10.69□□□□□ -0.7
CTNND1-220ENST00000529526 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
CTNND1-220ENST00000529526 CFDP1Q9UEE9 299 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-220ENST00000529526 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
CTNND1-220ENST00000529526 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
CTNND1-220ENST00000529526 KNSTRNQ9Y448 316 aa10.68□□□□□ -0.7
CTNND1-220ENST00000529526 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
CTNND1-220ENST00000529526 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
CTNND1-220ENST00000529526 ARID4BQ4LE39 1312 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-220ENST00000529526 BECN1Q14457 450 aa10.67□□□□□ -0.7
CTNND1-220ENST00000529526 DDRGK1Q96HY6 314 aa10.67□□□□□ -0.7
CTNND1-220ENST00000529526 CFAP53Q96M91 514 aa10.66□□□□□ -0.7
CTNND1-220ENST00000529526 TNNT2P45379 298 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-220ENST00000529526 NCLP19338 710 aaKnown RBP10.65□□□□□ -0.7
CTNND1-220ENST00000529526 BAZ1BQ9UIG0 1483 aaKnown RBP10.65□□□□□ -0.7
CTNND1-220ENST00000529526 EEA1Q15075 1411 aa10.65□□□□□ -0.7
CTNND1-220ENST00000529526 CC2D1BQ5T0F9 858 aaKnown RBP10.64□□□□□ -0.71
CTNND1-220ENST00000529526 FTSJ3Q8IY81 847 aaKnown RBP10.64□□□□□ -0.71
CTNND1-220ENST00000529526 GLIPR1L2Q4G1C9 344 aa10.63□□□□□ -0.71
CTNND1-220ENST00000529526 HAP1P54257 671 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-220ENST00000529526 KIF27Q86VH2 1401 aa10.63□□□□□ -0.71
CTNND1-220ENST00000529526 TNIKQ9UKE5 1360 aa10.61□□□□□ -0.71
CTNND1-220ENST00000529526 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
CTNND1-220ENST00000529526 CDCA8Q53HL2 280 aa10.61□□□□□ -0.71
CTNND1-220ENST00000529526 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-220ENST00000529526 RGS3P49796 1198 aa10.6□□□□□ -0.71
CTNND1-220ENST00000529526 TRIM44Q96DX7 344 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-220ENST00000529526 MAPK8IP3Q9UPT6 1336 aa10.6□□□□□ -0.71
CTNND1-220ENST00000529526 POGKQ9P215 609 aa10.59□□□□□ -0.71
CTNND1-220ENST00000529526 GOLGA6L22H0YM25 854 aa10.59□□□□□ -0.71
CTNND1-220ENST00000529526 CDK11BP21127 795 aaKnown RBP10.59□□□□□ -0.71
CTNND1-220ENST00000529526 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
CTNND1-220ENST00000529526 TAOK2Q9UL54 1235 aa10.59□□□□□ -0.71
CTNND1-220ENST00000529526 CASC1Q6TDU7 716 aa10.58□□□□□ -0.72
CTNND1-220ENST00000529526 EIF4G1Q04637 1599 aaKnown RBP10.57□□□□□ -0.72
CTNND1-220ENST00000529526 U2SURPO15042 1029 aaKnown RBP10.56□□□□□ -0.72
CTNND1-220ENST00000529526 PTMAP06454 111 aaKnown RBP10.55□□□□□ -0.72
CTNND1-220ENST00000529526 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
CTNND1-220ENST00000529526 DCAF11Q8TEB1 546 aa10.55□□□□□ -0.72
CTNND1-220ENST00000529526 PPP4R2Q9NY27 417 aa10.55□□□□□ -0.72
CTNND1-220ENST00000529526 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
CTNND1-220ENST00000529526 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
CTNND1-220ENST00000529526 TULP1O00294 542 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-220ENST00000529526 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
CTNND1-220ENST00000529526 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
CTNND1-220ENST00000529526 SOX12O15370 315 aa10.52□□□□□ -0.72
CTNND1-220ENST00000529526 ZRSR1Q15695 479 aaKnown RBP10.52□□□□□ -0.73
CTNND1-220ENST00000529526 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.73
CTNND1-220ENST00000529526 SAFB2Q14151 953 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTNND1-220ENST00000529526 SOGA1O94964 1423 aa10.51□□□□□ -0.73
CTNND1-220ENST00000529526 OS9Q13438 667 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-220ENST00000529526 NACADO15069 1562 aa10.5□□□□□ -0.73
CTNND1-220ENST00000529526 DNTTIP2Q5QJE6 756 aaKnown RBP10.5□□□□□ -0.73
CTNND1-220ENST00000529526 MLECQ14165 292 aa10.5□□□□□ -0.73
CTNND1-220ENST00000529526 TMF1P82094 1093 aa10.5□□□□□ -0.73
CTNND1-220ENST00000529526 FOXD1Q16676 465 aa10.5□□□□□ -0.73
CTNND1-220ENST00000529526 NOP58Q9Y2X3 529 aaKnown RBP10.5□□□□□ -0.73
CTNND1-220ENST00000529526 HSP90AB1P08238 724 aaKnown RBP10.49□□□□□ -0.73
CTNND1-220ENST00000529526 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
CTNND1-220ENST00000529526 CUX2O14529 1486 aa10.48□□□□□ -0.73
CTNND1-220ENST00000529526 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
CTNND1-220ENST00000529526 CECR2Q9BXF3 1484 aa10.48□□□□□ -0.73
CTNND1-220ENST00000529526 SRPK2P78362 688 aaKnown RBP10.47□□□□□ -0.73
CTNND1-220ENST00000529526 NPHP1O15259 732 aa10.47□□□□□ -0.73
CTNND1-220ENST00000529526 HSPA5P11021 654 aaKnown RBP10.47□□□□□ -0.73
CTNND1-220ENST00000529526 NAP1L2Q9ULW6 460 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-220ENST00000529526 CARMIL1Q5VZK9 1371 aa10.47□□□□□ -0.73
CTNND1-220ENST00000529526 FHAD1B1AJZ9 1412 aa10.46□□□□□ -0.73
CTNND1-220ENST00000529526 KANK1Q14678 1352 aa10.45□□□□□ -0.74
CTNND1-220ENST00000529526 MORC1Q86VD1 984 aa10.45□□□□□ -0.74
CTNND1-220ENST00000529526 NAP1L5Q96NT1 182 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-220ENST00000529526 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-220ENST00000529526 FGD1P98174 961 aa10.45□□□□□ -0.74
CTNND1-220ENST00000529526 KCNJ4P48050 445 aa10.45□□□□□ -0.74
CTNND1-220ENST00000529526 STK26Q9P289 416 aa10.45□□□□□ -0.74
CTNND1-220ENST00000529526 KANK4Q5T7N3 995 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-220ENST00000529526 SETD5Q9C0A6 1442 aa10.44□□□□□ -0.74
CTNND1-220ENST00000529526 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
CTNND1-220ENST00000529526 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
CTNND1-220ENST00000529526 ARHGAP35Q9NRY4 1499 aa10.43□□□□□ -0.74
CTNND1-220ENST00000529526 PKD2Q13563 968 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms