RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 MS4A3Q96HJ5 214 aa6.05□□□□□ -1.44
FDFT1-216ENST00000529521 C7P10643 843 aa6.04□□□□□ -1.44
FDFT1-216ENST00000529521 SLC39A7Q92504 469 aa6.04□□□□□ -1.44
FDFT1-216ENST00000529521 NPM1P06748 294 aaKnown RBP eCLIP6.03□□□□□ -1.44
FDFT1-216ENST00000529521 MAMSTRQ6ZN01 415 aa6.02□□□□□ -1.45
FDFT1-216ENST00000529521 FAM163AQ96GL9 167 aaPredicted RBP6.02□□□□□ -1.45
FDFT1-216ENST00000529521 SPDYE4A6NLX3 237 aa5.98□□□□□ -1.45
FDFT1-216ENST00000529521 ATN1P54259 1190 aaPredicted RBP5.98□□□□□ -1.45
FDFT1-216ENST00000529521 POTEFA5A3E0 1075 aa5.97□□□□□ -1.45
FDFT1-216ENST00000529521 SCUBE2Q9NQ36 999 aa5.97□□□□□ -1.45
FDFT1-216ENST00000529521 TSPYL2Q9H2G4 693 aaPredicted RBP5.94□□□□□ -1.46
FDFT1-216ENST00000529521 CCDC61Q9Y6R9 512 aa5.94□□□□□ -1.46
FDFT1-216ENST00000529521 BMP2KQ9NSY1 1161 aaPredicted RBP5.93□□□□□ -1.46
FDFT1-216ENST00000529521 CSRNP3Q8WYN3 585 aa5.92□□□□□ -1.46
FDFT1-216ENST00000529521 KIF12Q96FN5 646 aa5.92□□□□□ -1.46
FDFT1-216ENST00000529521 TRPC6Q9Y210 931 aa5.92□□□□□ -1.46
FDFT1-216ENST00000529521 CDAN1Q8IWY9 1227 aa5.91□□□□□ -1.46
FDFT1-216ENST00000529521 COLQQ9Y215 455 aaPredicted RBP5.89□□□□□ -1.47
FDFT1-216ENST00000529521 TIE1P35590 1138 aa5.87□□□□□ -1.47
FDFT1-216ENST00000529521 MAP3K13O43283 966 aa5.86□□□□□ -1.47
FDFT1-216ENST00000529521 TTLL13PA6NNM8 815 aa5.85□□□□□ -1.47
FDFT1-216ENST00000529521 SEC24BO95487 1268 aa5.84□□□□□ -1.47
FDFT1-216ENST00000529521 ST18O60284 1047 aa5.83□□□□□ -1.48
FDFT1-216ENST00000529521 RASEFQ8IZ41 740 aa5.81□□□□□ -1.48
FDFT1-216ENST00000529521 MMRN1Q13201 1228 aa5.8□□□□□ -1.48
FDFT1-216ENST00000529521 IER5LQ5T953 404 aa5.8□□□□□ -1.48
FDFT1-216ENST00000529521 PROM2Q8N271 834 aa5.8□□□□□ -1.48
FDFT1-216ENST00000529521 SLAIN1Q8ND83 568 aa5.8□□□□□ -1.48
FDFT1-216ENST00000529521 TRIM35Q9UPQ4 493 aa5.8□□□□□ -1.48
FDFT1-216ENST00000529521 SPNS2Q8IVW8 549 aa5.78□□□□□ -1.48
FDFT1-216ENST00000529521 SGIP1Q9BQI5 828 aa5.75□□□□□ -1.49
FDFT1-216ENST00000529521 PCDHB13Q9Y5F0 798 aa5.75□□□□□ -1.49
FDFT1-216ENST00000529521 IFNL1Q8IU54 200 aa5.73□□□□□ -1.49
FDFT1-216ENST00000529521 MIER1Q8N108 512 aa5.73□□□□□ -1.49
FDFT1-216ENST00000529521 EHMT2Q96KQ7 1210 aa5.73□□□□□ -1.49
FDFT1-216ENST00000529521 IRX5P78411 483 aaPredicted RBP5.72□□□□□ -1.49
FDFT1-216ENST00000529521 TMEM121BQ9BXQ6 578 aaPredicted RBP5.72□□□□□ -1.49
FDFT1-216ENST00000529521 PLEKHG5O94827 1062 aa5.71□□□□□ -1.5
FDFT1-216ENST00000529521 PLCG2P16885 1265 aa5.71□□□□□ -1.5
FDFT1-216ENST00000529521 MARVELD3Q96A59 401 aa5.71□□□□□ -1.5
FDFT1-216ENST00000529521 TMEM106CQ9BVX2 250 aa5.71□□□□□ -1.5
FDFT1-216ENST00000529521 NUBP1P53384 320 aa5.68□□□□□ -1.5
FDFT1-216ENST00000529521 SNPHO15079 494 aa5.67□□□□□ -1.5
FDFT1-216ENST00000529521 OCEL1Q9H607 264 aa5.67□□□□□ -1.5
FDFT1-216ENST00000529521 POTEB3A0JP26 581 aa5.64□□□□□ -1.51
FDFT1-216ENST00000529521 POTEBQ6S5H4 581 aa5.64□□□□□ -1.51
FDFT1-216ENST00000529521 PLCD3Q8N3E9 789 aa5.64□□□□□ -1.51
FDFT1-216ENST00000529521 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
FDFT1-216ENST00000529521 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
FDFT1-216ENST00000529521 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.64□□□□□ -1.51
FDFT1-216ENST00000529521 EMP3P54852 163 aa5.62□□□□□ -1.51
FDFT1-216ENST00000529521 FAM212AQ96EL1 285 aa5.61□□□□□ -1.51
FDFT1-216ENST00000529521 HS3ST6Q96QI5 342 aa5.6□□□□□ -1.51
FDFT1-216ENST00000529521 PDCD7Q8N8D1 485 aaKnown RBP5.59□□□□□ -1.51
FDFT1-216ENST00000529521 ZBTB47Q9UFB7 747 aaPredicted RBP5.59□□□□□ -1.51
FDFT1-216ENST00000529521 FAM205CA6NFA0 338 aa5.58□□□□□ -1.52
FDFT1-216ENST00000529521 SLC24A1O60721 1099 aa5.58□□□□□ -1.52
FDFT1-216ENST00000529521 PCDHB8Q9UN66 801 aa5.58□□□□□ -1.52
FDFT1-216ENST00000529521 PYGBP11216 843 aa5.57□□□□□ -1.52
FDFT1-216ENST00000529521 C3orf67Q6ZVT6 689 aa5.56□□□□□ -1.52
FDFT1-216ENST00000529521 DCAF8Q5TAQ9 597 aa5.53□□□□□ -1.52
FDFT1-216ENST00000529521 L3MBTL3Q96JM7 780 aaPredicted RBP5.53□□□□□ -1.52
FDFT1-216ENST00000529521 HOXB3P14651 431 aaPredicted RBP5.5□□□□□ -1.53
FDFT1-216ENST00000529521 MKRN3Q13064 507 aaKnown RBP5.49□□□□□ -1.53
FDFT1-216ENST00000529521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.49□□□□□ -1.539e-26■□□□□ 11.3
FDFT1-216ENST00000529521 GOLGA2Q08379 1002 aa5.48□□□□□ -1.53
FDFT1-216ENST00000529521 ILDR1Q86SU0 546 aaPredicted RBP5.48□□□□□ -1.53
FDFT1-216ENST00000529521 RNF166Q96A37 237 aaPredicted RBP5.48□□□□□ -1.53
FDFT1-216ENST00000529521 DPY19L2Q6NUT2 758 aa5.47□□□□□ -1.53
FDFT1-216ENST00000529521 HOXB1P14653 301 aaPredicted RBP5.46□□□□□ -1.54
FDFT1-216ENST00000529521 ZNF467Q7Z7K2 595 aaPredicted RBP5.46□□□□□ -1.54
FDFT1-216ENST00000529521 PSEN1P49768 467 aa5.44□□□□□ -1.54
FDFT1-216ENST00000529521 ERBB3P21860 1342 aa5.44□□□□□ -1.54
FDFT1-216ENST00000529521 MYT1LQ9UL68 1186 aa5.43□□□□□ -1.54
FDFT1-216ENST00000529521 ZNF710Q8N1W2 664 aa5.42□□□□□ -1.54
FDFT1-216ENST00000529521 BOLA1Q9Y3E2 137 aa5.42□□□□□ -1.54
FDFT1-216ENST00000529521 CHRM1P11229 460 aaPredicted RBP5.41□□□□□ -1.54
FDFT1-216ENST00000529521 VARS2Q5ST30 1063 aaKnown RBP5.41□□□□□ -1.54
FDFT1-216ENST00000529521 GSE1Q14687 1217 aa5.4□□□□□ -1.54
FDFT1-216ENST00000529521 DOK7Q18PE1 504 aa5.4□□□□□ -1.54
FDFT1-216ENST00000529521 G3V3G9 751 aa5.38□□□□□ -1.55
FDFT1-216ENST00000529521 PDAP1Q13442 181 aaKnown RBP5.38□□□□□ -1.55
FDFT1-216ENST00000529521 ZNF687Q8N1G0 1237 aa5.38□□□□□ -1.55
FDFT1-216ENST00000529521 CABP2Q9NPB3 220 aa5.38□□□□□ -1.55
FDFT1-216ENST00000529521 FKBP8Q14318 412 aa5.37□□□□□ -1.55
FDFT1-216ENST00000529521 RIMBP2O15034 1052 aa5.35□□□□□ -1.55
FDFT1-216ENST00000529521 PTGER2P43116 358 aa5.34□□□□□ -1.55
FDFT1-216ENST00000529521 GPR153Q6NV75 609 aa5.34□□□□□ -1.55
FDFT1-216ENST00000529521 TMEM92Q6UXU6 159 aa5.34□□□□□ -1.55
FDFT1-216ENST00000529521 KLHL34Q8N239 644 aa5.34□□□□□ -1.55
FDFT1-216ENST00000529521 ZSWIM6Q9HCJ5 1215 aa5.33□□□□□ -1.56
FDFT1-216ENST00000529521 ANKRD13DQ6ZTN6 518 aa5.32□□□□□ -1.56
FDFT1-216ENST00000529521 FBXO3Q9UK99 471 aa5.32□□□□□ -1.56
FDFT1-216ENST00000529521 VASPP50552 380 aaPredicted RBP5.3□□□□□ -1.56
FDFT1-216ENST00000529521 MICALL2Q8IY33 904 aa5.29□□□□□ -1.56
FDFT1-216ENST00000529521 EFCAB3Q8N7B9 438 aa5.29□□□□□ -1.56
FDFT1-216ENST00000529521 LSM11P83369 360 aaKnown RBP eCLIP5.28□□□□□ -1.56
FDFT1-216ENST00000529521 ARSIQ5FYB1 569 aa5.28□□□□□ -1.56
FDFT1-216ENST00000529521 ZNF316A6NFI3 1004 aaPredicted RBP5.26□□□□□ -1.57
FDFT1-216ENST00000529521 KHSRPQ92945 711 aaKnown RBP eCLIP5.26□□□□□ -1.573e-21■□□□□ 9.9
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms