RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.92
PCDHA6-203ENST00000529310 TSPY4P0CV99 314 aa20.82■□□□□ 0.92
PCDHA6-203ENST00000529310 TSPY10P0CW01 314 aa20.82■□□□□ 0.92
PCDHA6-203ENST00000529310 MYH16Q9H6N6 1097 aa20.82■□□□□ 0.92
PCDHA6-203ENST00000529310 BECN1Q14457 450 aa20.81■□□□□ 0.92
PCDHA6-203ENST00000529310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.79■□□□□ 0.92
PCDHA6-203ENST00000529310 TRIM44Q96DX7 344 aaPredicted RBP20.79■□□□□ 0.92
PCDHA6-203ENST00000529310 KDM2AQ9Y2K7 1162 aa20.79■□□□□ 0.92
PCDHA6-203ENST00000529310 ANP32EQ9BTT0 268 aa20.78■□□□□ 0.92
PCDHA6-203ENST00000529310 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.92
PCDHA6-203ENST00000529310 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
PCDHA6-203ENST00000529310 EIF4G2P78344 907 aaKnown RBP eCLIP20.73■□□□□ 0.91
PCDHA6-203ENST00000529310 NCLP19338 710 aaKnown RBP20.73■□□□□ 0.91
PCDHA6-203ENST00000529310 PLEKHD1A6NEE1 506 aa20.71■□□□□ 0.91
PCDHA6-203ENST00000529310 GOLGA6L22H0YM25 854 aa20.71■□□□□ 0.91
PCDHA6-203ENST00000529310 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
PCDHA6-203ENST00000529310 CDK11BP21127 795 aaKnown RBP20.7■□□□□ 0.9
PCDHA6-203ENST00000529310 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
PCDHA6-203ENST00000529310 EEA1Q15075 1411 aa20.68■□□□□ 0.9
PCDHA6-203ENST00000529310 KIF27Q86VH2 1401 aa20.66■□□□□ 0.9
PCDHA6-203ENST00000529310 CLIP1P30622 1438 aa20.62■□□□□ 0.89
PCDHA6-203ENST00000529310 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
PCDHA6-203ENST00000529310 PPM1GO15355 546 aaPredicted RBP20.61■□□□□ 0.89
PCDHA6-203ENST00000529310 PTMAP06454 111 aaKnown RBP20.58■□□□□ 0.89
PCDHA6-203ENST00000529310 ERICH6BQ5W0A0 696 aa20.58■□□□□ 0.88
PCDHA6-203ENST00000529310 SUPT16HQ9Y5B9 1047 aaKnown RBP20.56■□□□□ 0.88
PCDHA6-203ENST00000529310 GOLGA3Q08378 1498 aa20.54■□□□□ 0.88
PCDHA6-203ENST00000529310 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
PCDHA6-203ENST00000529310 RRP7BPQ9NSQ0 103 aa20.52■□□□□ 0.88
PCDHA6-203ENST00000529310 DNTTIP2Q5QJE6 756 aaKnown RBP20.52■□□□□ 0.88
PCDHA6-203ENST00000529310 ARID4BQ4LE39 1312 aaPredicted RBP20.51■□□□□ 0.87
PCDHA6-203ENST00000529310 ZRSR1Q15695 479 aaKnown RBP20.51■□□□□ 0.87
PCDHA6-203ENST00000529310 CECR2Q9BXF3 1484 aa20.49■□□□□ 0.87
PCDHA6-203ENST00000529310 CASC1Q6TDU7 716 aa20.48■□□□□ 0.87
PCDHA6-203ENST00000529310 SENP3-EIF4A1A0A087X0R7 540 aa20.47■□□□□ 0.87
PCDHA6-203ENST00000529310 CFAP53Q96M91 514 aa20.47■□□□□ 0.87
PCDHA6-203ENST00000529310 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
PCDHA6-203ENST00000529310 NAP1L5Q96NT1 182 aaPredicted RBP20.47■□□□□ 0.87
PCDHA6-203ENST00000529310 PPP1R15AO75807 674 aaPredicted RBP20.46■□□□□ 0.87
PCDHA6-203ENST00000529310 LAS1LQ9Y4W2 734 aaKnown RBP20.46■□□□□ 0.87
PCDHA6-203ENST00000529310 PPP4R2Q9NY27 417 aa20.46■□□□□ 0.87
PCDHA6-203ENST00000529310 FTSJ3Q8IY81 847 aaKnown RBP20.44■□□□□ 0.86
PCDHA6-203ENST00000529310 CFDP1Q9UEE9 299 aaPredicted RBP20.44■□□□□ 0.86
PCDHA6-203ENST00000529310 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
PCDHA6-203ENST00000529310 RTN4Q9NQC3 1192 aaKnown RBP20.43■□□□□ 0.86
PCDHA6-203ENST00000529310 KNSTRNQ9Y448 316 aa20.43■□□□□ 0.86
PCDHA6-203ENST00000529310 A0A0G2JS52 829 aa20.42■□□□□ 0.86
PCDHA6-203ENST00000529310 ZBTB7CA1YPR0 619 aa20.42■□□□□ 0.86
PCDHA6-203ENST00000529310 TPRNQ4KMQ1 711 aa20.41■□□□□ 0.86
PCDHA6-203ENST00000529310 CDCA8Q53HL2 280 aa20.41■□□□□ 0.86
PCDHA6-203ENST00000529310 RGL3Q3MIN7 710 aa20.4■□□□□ 0.86
PCDHA6-203ENST00000529310 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
PCDHA6-203ENST00000529310 TRHP20396 242 aaPredicted RBP20.38■□□□□ 0.85
PCDHA6-203ENST00000529310 RGS3P49796 1198 aa20.38■□□□□ 0.85
PCDHA6-203ENST00000529310 C14orf37Q86TY3 774 aa20.38■□□□□ 0.85
PCDHA6-203ENST00000529310 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
PCDHA6-203ENST00000529310 CUX2O14529 1486 aa20.34■□□□□ 0.85
PCDHA6-203ENST00000529310 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
PCDHA6-203ENST00000529310 PLEKHG5O94827 1062 aa20.33■□□□□ 0.85
PCDHA6-203ENST00000529310 NEUROD2Q15784 382 aa20.33■□□□□ 0.85
PCDHA6-203ENST00000529310 PLCB2Q00722 1185 aa20.33■□□□□ 0.84
PCDHA6-203ENST00000529310 CEP162Q5TB80 1403 aa20.33■□□□□ 0.84
PCDHA6-203ENST00000529310 CARMIL1Q5VZK9 1371 aa20.31■□□□□ 0.84
PCDHA6-203ENST00000529310 MAPK8IP3Q9UPT6 1336 aa20.3■□□□□ 0.84
PCDHA6-203ENST00000529310 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
PCDHA6-203ENST00000529310 FRAT1Q92837 279 aaPredicted RBP20.29■□□□□ 0.84
PCDHA6-203ENST00000529310 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
PCDHA6-203ENST00000529310 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.84
PCDHA6-203ENST00000529310 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
PCDHA6-203ENST00000529310 MROH2BQ7Z745 1585 aa20.26■□□□□ 0.83
PCDHA6-203ENST00000529310 CHMP4BQ9H444 224 aaKnown RBP20.26■□□□□ 0.83
PCDHA6-203ENST00000529310 NUDCQ9Y266 331 aa20.26■□□□□ 0.83
PCDHA6-203ENST00000529310 GOLGA6L6A8MZA4 724 aa20.25■□□□□ 0.83
PCDHA6-203ENST00000529310 MS4A1P11836 297 aa20.23■□□□□ 0.83
PCDHA6-203ENST00000529310 CARMIL2Q6F5E8 1435 aa20.21■□□□□ 0.83
PCDHA6-203ENST00000529310 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
PCDHA6-203ENST00000529310 SOGA1O94964 1423 aa20.2■□□□□ 0.82
PCDHA6-203ENST00000529310 NRDCO43847 1150 aa20.2■□□□□ 0.82
PCDHA6-203ENST00000529310 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
PCDHA6-203ENST00000529310 SIN3AQ96ST3 1273 aa20.2■□□□□ 0.82
PCDHA6-203ENST00000529310 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
PCDHA6-203ENST00000529310 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
PCDHA6-203ENST00000529310 DEKP35659 375 aaKnown RBP20.18■□□□□ 0.82
PCDHA6-203ENST00000529310 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
PCDHA6-203ENST00000529310 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
PCDHA6-203ENST00000529310 FGD1P98174 961 aa20.17■□□□□ 0.82
PCDHA6-203ENST00000529310 CC2D1BQ5T0F9 858 aaKnown RBP20.16■□□□□ 0.82
PCDHA6-203ENST00000529310 CHAF1AQ13111 956 aaPredicted RBP20.16■□□□□ 0.82
PCDHA6-203ENST00000529310 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
PCDHA6-203ENST00000529310 TULP1O00294 542 aaPredicted RBP20.15■□□□□ 0.82
PCDHA6-203ENST00000529310 MSNP26038 577 aaKnown RBP20.14■□□□□ 0.82
PCDHA6-203ENST00000529310 HAP1P54257 671 aaPredicted RBP20.14■□□□□ 0.81
PCDHA6-203ENST00000529310 OS9Q13438 667 aaPredicted RBP20.14■□□□□ 0.81
PCDHA6-203ENST00000529310 KCNJ4P48050 445 aa20.14■□□□□ 0.81
PCDHA6-203ENST00000529310 TAOK2Q9UL54 1235 aa20.13■□□□□ 0.81
PCDHA6-203ENST00000529310 GOLGA6L4A6NEF3 574 aa20.13■□□□□ 0.81
PCDHA6-203ENST00000529310 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
PCDHA6-203ENST00000529310 RBM19Q9Y4C8 960 aaKnown RBP20.11■□□□□ 0.81
PCDHA6-203ENST00000529310 U2SURPO15042 1029 aaKnown RBP20.1■□□□□ 0.81
PCDHA6-203ENST00000529310 KANK1Q14678 1352 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms