RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
ATM-211ENST00000527389 CCDC61Q9Y6R9 512 aa15.59■□□□□ 0.09
ATM-211ENST00000527389 PKD2Q13563 968 aa15.58■□□□□ 0.08
ATM-211ENST00000527389 ZRANB1Q9UGI0 708 aa15.57■□□□□ 0.08
ATM-211ENST00000527389 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
ATM-211ENST00000527389 EVX2Q03828 476 aa15.53■□□□□ 0.08
ATM-211ENST00000527389 ZNF579Q8NAF0 562 aaKnown RBP15.53■□□□□ 0.08
ATM-211ENST00000527389 CHRM1P11229 460 aaPredicted RBP15.5■□□□□ 0.07
ATM-211ENST00000527389 ECM2O94769 699 aaPredicted RBP15.45■□□□□ 0.06
ATM-211ENST00000527389 PYGBP11216 843 aa15.43■□□□□ 0.06
ATM-211ENST00000527389 PHF12Q96QT6 1004 aa15.43■□□□□ 0.06
ATM-211ENST00000527389 KIF12Q96FN5 646 aa15.41■□□□□ 0.06
ATM-211ENST00000527389 CLCN6P51797 869 aa15.38■□□□□ 0.05
ATM-211ENST00000527389 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
ATM-211ENST00000527389 MAP3K13O43283 966 aa15.35■□□□□ 0.05
ATM-211ENST00000527389 RNF25Q96BH1 459 aaPredicted RBP15.33■□□□□ 0.04
ATM-211ENST00000527389 RGL2O15211 777 aa15.32■□□□□ 0.04
ATM-211ENST00000527389 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
ATM-211ENST00000527389 ZNF467Q7Z7K2 595 aaPredicted RBP15.29■□□□□ 0.04
ATM-211ENST00000527389 SP7Q8TDD2 431 aaPredicted RBP15.29■□□□□ 0.04
ATM-211ENST00000527389 MS4A3Q96HJ5 214 aa15.28■□□□□ 0.04
ATM-211ENST00000527389 RIOK3O14730 519 aaKnown RBP15.26■□□□□ 0.03
ATM-211ENST00000527389 IFNL1Q8IU54 200 aa15.26■□□□□ 0.03
ATM-211ENST00000527389 GABBR2O75899 941 aa15.24■□□□□ 0.03
ATM-211ENST00000527389 PCDHB8Q9UN66 801 aa15.23■□□□□ 0.03
ATM-211ENST00000527389 GALR2O43603 387 aaPredicted RBP15.22■□□□□ 0.03
ATM-211ENST00000527389 VGFO15240 615 aaPredicted RBP15.18■□□□□ 0.02
ATM-211ENST00000527389 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
ATM-211ENST00000527389 PDAP1Q13442 181 aaKnown RBP15.15■□□□□ 0.02
ATM-211ENST00000527389 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
ATM-211ENST00000527389 TIE1P35590 1138 aa15.11■□□□□ 0.01
ATM-211ENST00000527389 PSEN1P49768 467 aa15.1■□□□□ 0.01
ATM-211ENST00000527389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.08■□□□□ 0
ATM-211ENST00000527389 ZFP91Q96JP5 570 aaPredicted RBP15.08■□□□□ 0
ATM-211ENST00000527389 DCAF8L2P0C7V8 631 aa15.06■□□□□ 0
ATM-211ENST00000527389 BMP2KQ9NSY1 1161 aaPredicted RBP15.05■□□□□ -0
ATM-211ENST00000527389 HS6ST3Q8IZP7 471 aa15.03■□□□□ -0
ATM-211ENST00000527389 TTLL13PA6NNM8 815 aa15.02■□□□□ -0
ATM-211ENST00000527389 ASTLQ6HA08 431 aaPredicted RBP15.02■□□□□ -0
ATM-211ENST00000527389 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
ATM-211ENST00000527389 STK25O00506 426 aa15□□□□□ -0.01
ATM-211ENST00000527389 DCBLD2Q96PD2 775 aa14.99□□□□□ -0.01
ATM-211ENST00000527389 BCL11BQ9C0K0 894 aaPredicted RBP14.99□□□□□ -0.01
ATM-211ENST00000527389 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
ATM-211ENST00000527389 CHGAP10645 457 aaKnown RBP14.98□□□□□ -0.01
ATM-211ENST00000527389 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
ATM-211ENST00000527389 STK24Q9Y6E0 443 aa14.95□□□□□ -0.02
ATM-211ENST00000527389 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
ATM-211ENST00000527389 ATN1P54259 1190 aaPredicted RBP14.94□□□□□ -0.02
ATM-211ENST00000527389 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
ATM-211ENST00000527389 CABP2Q9NPB3 220 aa14.9□□□□□ -0.02
ATM-211ENST00000527389 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
ATM-211ENST00000527389 GOLGA2Q08379 1002 aa14.83□□□□□ -0.04
ATM-211ENST00000527389 EFCAB3Q8N7B9 438 aa14.83□□□□□ -0.04
ATM-211ENST00000527389 BBXQ8WY36 941 aaPredicted RBP14.83□□□□□ -0.04
ATM-211ENST00000527389 IER5LQ5T953 404 aa14.82□□□□□ -0.04
ATM-211ENST00000527389 MKRN3Q13064 507 aaKnown RBP14.81□□□□□ -0.04
ATM-211ENST00000527389 SOX12O15370 315 aa14.8□□□□□ -0.04
ATM-211ENST00000527389 NKX1-1Q15270 411 aaPredicted RBP14.8□□□□□ -0.04
ATM-211ENST00000527389 SLC39A7Q92504 469 aa14.79□□□□□ -0.04
ATM-211ENST00000527389 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
ATM-211ENST00000527389 C7P10643 843 aa14.74□□□□□ -0.05
ATM-211ENST00000527389 MFRPQ9BY79 579 aa14.74□□□□□ -0.05
ATM-211ENST00000527389 IRX5P78411 483 aaPredicted RBP14.73□□□□□ -0.05
ATM-211ENST00000527389 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
ATM-211ENST00000527389 FBXO22Q8NEZ5 403 aa14.71□□□□□ -0.05
ATM-211ENST00000527389 METRNQ9UJH8 293 aa14.71□□□□□ -0.05
ATM-211ENST00000527389 PHF8Q9UPP1 1060 aa14.71□□□□□ -0.05
ATM-211ENST00000527389 NLRP6P59044 892 aa14.7□□□□□ -0.06
ATM-211ENST00000527389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.69□□□□□ -0.068e-8■■■■□ 20.8
ATM-211ENST00000527389 RYDENQ9NUL5 291 aaKnown RBP14.68□□□□□ -0.06
ATM-211ENST00000527389 POTEFA5A3E0 1075 aa14.67□□□□□ -0.06
ATM-211ENST00000527389 PDCD7Q8N8D1 485 aaKnown RBP14.67□□□□□ -0.06
ATM-211ENST00000527389 OCEL1Q9H607 264 aa14.67□□□□□ -0.06
ATM-211ENST00000527389 GTPBP6O43824 516 aaPredicted RBP14.66□□□□□ -0.06
ATM-211ENST00000527389 MS4A4AQ96JQ5 239 aa14.65□□□□□ -0.06
ATM-211ENST00000527389 PLCG2P16885 1265 aa14.64□□□□□ -0.07
ATM-211ENST00000527389 COLQQ9Y215 455 aaPredicted RBP14.64□□□□□ -0.07
ATM-211ENST00000527389 SEC24BO95487 1268 aa14.62□□□□□ -0.07
ATM-211ENST00000527389 SPRYD3Q8NCJ5 442 aa14.61□□□□□ -0.07
ATM-211ENST00000527389 PAXIP1Q6ZW49 1069 aaPredicted RBP14.57□□□□□ -0.08
ATM-211ENST00000527389 PLCB2Q00722 1185 aa14.56□□□□□ -0.08
ATM-211ENST00000527389 DPY19L2Q6NUT2 758 aa14.54□□□□□ -0.08
ATM-211ENST00000527389 CFAP44Q96MT7 982 aa14.53□□□□□ -0.08
ATM-211ENST00000527389 PPP1R37O75864 691 aa14.52□□□□□ -0.09
ATM-211ENST00000527389 L3MBTL3Q96JM7 780 aaPredicted RBP14.49□□□□□ -0.09
ATM-211ENST00000527389 POTEB2H3BUK9 544 aa14.46□□□□□ -0.09
ATM-211ENST00000527389 TMEM121BQ9BXQ6 578 aaPredicted RBP14.46□□□□□ -0.09
ATM-211ENST00000527389 BOLA1Q9Y3E2 137 aa14.46□□□□□ -0.09
ATM-211ENST00000527389 MICALL2Q8IY33 904 aa14.43□□□□□ -0.1
ATM-211ENST00000527389 POTEJP0CG39 1038 aa14.4□□□□□ -0.1
ATM-211ENST00000527389 G3V3G9 751 aa14.39□□□□□ -0.11
ATM-211ENST00000527389 LHX8Q68G74 356 aa14.34□□□□□ -0.11
ATM-211ENST00000527389 MAMSTRQ6ZN01 415 aa14.32□□□□□ -0.12
ATM-211ENST00000527389 C3orf67Q6ZVT6 689 aa14.3□□□□□ -0.12
ATM-211ENST00000527389 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
ATM-211ENST00000527389 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
ATM-211ENST00000527389 SCUBE2Q9NQ36 999 aa14.28□□□□□ -0.12
ATM-211ENST00000527389 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.28□□□□□ -0.12
ATM-211ENST00000527389 HAP1P54257 671 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms