RNA–Protein interactions for RNA: ENST00000526574.1

PPP6R3-211, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 5

Gene PPP6R3, Length 489 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-211ENST00000526574 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
PPP6R3-211ENST00000526574 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
PPP6R3-211ENST00000526574 HECW2Q9P2P5 1572 aa16■□□□□ 0.15
PPP6R3-211ENST00000526574 TOP2AP11388 1531 aaKnown RBP16■□□□□ 0.15
PPP6R3-211ENST00000526574 SYNJ2O15056 1496 aa16■□□□□ 0.15
PPP6R3-211ENST00000526574 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
PPP6R3-211ENST00000526574 KDM6BO15054 1643 aa15.99■□□□□ 0.15
PPP6R3-211ENST00000526574 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
PPP6R3-211ENST00000526574 FAM69CQ0P6D2 419 aa15.95■□□□□ 0.14
PPP6R3-211ENST00000526574 SOGA1O94964 1423 aa15.94■□□□□ 0.14
PPP6R3-211ENST00000526574 DSG3P32926 999 aa15.94■□□□□ 0.14
PPP6R3-211ENST00000526574 GRIN2BQ13224 1484 aa15.93■□□□□ 0.14
PPP6R3-211ENST00000526574 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
PPP6R3-211ENST00000526574 CAPN15O75808 1086 aa15.93■□□□□ 0.14
PPP6R3-211ENST00000526574 ABCC10Q5T3U5 1492 aa15.92■□□□□ 0.14
PPP6R3-211ENST00000526574 SOCS7O14512 581 aa15.91■□□□□ 0.14
PPP6R3-211ENST00000526574 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
PPP6R3-211ENST00000526574 U3KPZ7 1027 aaPredicted RBP15.89■□□□□ 0.13
PPP6R3-211ENST00000526574 ADGRL1O94910 1474 aa15.88■□□□□ 0.13
PPP6R3-211ENST00000526574 CEP170Q5SW79 1584 aa15.83■□□□□ 0.13
PPP6R3-211ENST00000526574 DIP2BQ9P265 1576 aa15.83■□□□□ 0.12
PPP6R3-211ENST00000526574 NPM1P06748 294 aaKnown RBP eCLIP15.82■□□□□ 0.12
PPP6R3-211ENST00000526574 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
PPP6R3-211ENST00000526574 CCDC88BA6NC98 1476 aa15.81■□□□□ 0.12
PPP6R3-211ENST00000526574 MAPKBP1O60336 1514 aa15.81■□□□□ 0.12
PPP6R3-211ENST00000526574 TSPOAP1O95153 1857 aa15.81■□□□□ 0.12
PPP6R3-211ENST00000526574 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
PPP6R3-211ENST00000526574 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
PPP6R3-211ENST00000526574 FGD5Q6ZNL6 1462 aa15.75■□□□□ 0.11
PPP6R3-211ENST00000526574 ILDR2Q71H61 639 aa15.72■□□□□ 0.11
PPP6R3-211ENST00000526574 GRIN2AQ12879 1464 aa15.71■□□□□ 0.1
PPP6R3-211ENST00000526574 NUP160Q12769 1436 aa15.7■□□□□ 0.1
PPP6R3-211ENST00000526574 DISP3Q9P2K9 1392 aa15.66■□□□□ 0.1
PPP6R3-211ENST00000526574 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
PPP6R3-211ENST00000526574 PRG4Q92954 1404 aaPredicted RBP15.62■□□□□ 0.09
PPP6R3-211ENST00000526574 APLP2Q06481 763 aa15.61■□□□□ 0.09
PPP6R3-211ENST00000526574 ABCA5Q8WWZ7 1642 aa15.6■□□□□ 0.09
PPP6R3-211ENST00000526574 ADCY10Q96PN6 1610 aa15.58■□□□□ 0.09
PPP6R3-211ENST00000526574 JPH4Q96JJ6 628 aa15.56■□□□□ 0.08
PPP6R3-211ENST00000526574 CUX1P39880 1505 aa15.56■□□□□ 0.08
PPP6R3-211ENST00000526574 ADAMTS12P58397 1594 aa15.55■□□□□ 0.08
PPP6R3-211ENST00000526574 ABCA10Q8WWZ4 1543 aa15.55■□□□□ 0.08
PPP6R3-211ENST00000526574 PPRC1Q5VV67 1664 aaKnown RBP15.54■□□□□ 0.08
PPP6R3-211ENST00000526574 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
PPP6R3-211ENST00000526574 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
PPP6R3-211ENST00000526574 GLI2P10070 1586 aa15.49■□□□□ 0.07
PPP6R3-211ENST00000526574 COL17A1Q9UMD9 1497 aaPredicted RBP15.46■□□□□ 0.07
PPP6R3-211ENST00000526574 ABCB7O75027 752 aa15.43■□□□□ 0.06
PPP6R3-211ENST00000526574 SPATA31D1Q6ZQQ2 1576 aa15.43■□□□□ 0.06
PPP6R3-211ENST00000526574 TEX14Q8IWB6 1497 aa15.42■□□□□ 0.06
PPP6R3-211ENST00000526574 CERKQ8TCT0 537 aa15.42■□□□□ 0.06
PPP6R3-211ENST00000526574 PLB1Q6P1J6 1458 aa15.41■□□□□ 0.06
PPP6R3-211ENST00000526574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
PPP6R3-211ENST00000526574 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
PPP6R3-211ENST00000526574 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
PPP6R3-211ENST00000526574 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
PPP6R3-211ENST00000526574 ASXL2Q76L83 1435 aa15.35■□□□□ 0.05
PPP6R3-211ENST00000526574 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
PPP6R3-211ENST00000526574 MAP3K4Q9Y6R4 1608 aa15.35■□□□□ 0.05
PPP6R3-211ENST00000526574 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
PPP6R3-211ENST00000526574 ABCC2Q92887 1545 aa15.33■□□□□ 0.04
PPP6R3-211ENST00000526574 PTPRMP28827 1452 aa15.32■□□□□ 0.04
PPP6R3-211ENST00000526574 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
PPP6R3-211ENST00000526574 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
PPP6R3-211ENST00000526574 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
PPP6R3-211ENST00000526574 KIF21BO75037 1637 aa15.27■□□□□ 0.03
PPP6R3-211ENST00000526574 EPRSP07814 1512 aaKnown RBP15.27■□□□□ 0.03
PPP6R3-211ENST00000526574 PTPRGP23470 1445 aa15.26■□□□□ 0.03
PPP6R3-211ENST00000526574 CUL7Q14999 1698 aa15.26■□□□□ 0.03
PPP6R3-211ENST00000526574 KCNA4P22459 653 aa15.26■□□□□ 0.03
PPP6R3-211ENST00000526574 ADAMTSL3P82987 1691 aa15.25■□□□□ 0.03
PPP6R3-211ENST00000526574 SAMD1Q6SPF0 538 aaPredicted RBP15.23■□□□□ 0.03
PPP6R3-211ENST00000526574 UHRF1BP1LA0JNW5 1464 aa15.2■□□□□ 0.02
PPP6R3-211ENST00000526574 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
PPP6R3-211ENST00000526574 TNIKQ9UKE5 1360 aa15.15■□□□□ 0.02
PPP6R3-211ENST00000526574 MAGI3Q5TCQ9 1506 aa15.13■□□□□ 0.01
PPP6R3-211ENST00000526574 HSPA2P54652 639 aa15.13■□□□□ 0.01
PPP6R3-211ENST00000526574 CARMIL2Q6F5E8 1435 aa15.13■□□□□ 0.01
PPP6R3-211ENST00000526574 TTBK1Q5TCY1 1321 aaPredicted RBP15.13■□□□□ 0.01
PPP6R3-211ENST00000526574 KDM5BQ9UGL1 1544 aa15.12■□□□□ 0.01
PPP6R3-211ENST00000526574 BCORL1Q5H9F3 1711 aa15.12■□□□□ 0.01
PPP6R3-211ENST00000526574 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
PPP6R3-211ENST00000526574 CFAP43Q8NDM7 1665 aa15.1■□□□□ 0.01
PPP6R3-211ENST00000526574 MADDQ8WXG6 1647 aa15.09■□□□□ 0.01
PPP6R3-211ENST00000526574 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
PPP6R3-211ENST00000526574 CD109Q6YHK3 1445 aa15.09■□□□□ 0.01
PPP6R3-211ENST00000526574 ZCCHC11Q5TAX3 1644 aaKnown RBP15.07■□□□□ 0
PPP6R3-211ENST00000526574 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
PPP6R3-211ENST00000526574 WDR7Q9Y4E6 1490 aa15.04■□□□□ -0
PPP6R3-211ENST00000526574 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
PPP6R3-211ENST00000526574 ARID4BQ4LE39 1312 aaPredicted RBP15.01□□□□□ -0.01
PPP6R3-211ENST00000526574 PHLDB1Q86UU1 1377 aa14.98□□□□□ -0.01
PPP6R3-211ENST00000526574 IQSEC2Q5JU85 1478 aa14.98□□□□□ -0.01
PPP6R3-211ENST00000526574 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
PPP6R3-211ENST00000526574 YEATS2Q9ULM3 1422 aa14.97□□□□□ -0.01
PPP6R3-211ENST00000526574 POLA2Q14181 598 aa14.93□□□□□ -0.02
PPP6R3-211ENST00000526574 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
PPP6R3-211ENST00000526574 STRCQ7RTU9 1775 aa14.92□□□□□ -0.02
PPP6R3-211ENST00000526574 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
PPP6R3-211ENST00000526574 PREX1Q8TCU6 1659 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms