RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
CCDC90B-206ENST00000526265 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
CCDC90B-206ENST00000526265 RSF1Q96T23 1441 aaPredicted RBP17.87■□□□□ 0.45
CCDC90B-206ENST00000526265 NUBP1P53384 320 aa17.83■□□□□ 0.45
CCDC90B-206ENST00000526265 CHRDL2Q6WN34 429 aa17.83■□□□□ 0.45
CCDC90B-206ENST00000526265 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
CCDC90B-206ENST00000526265 FXR2P51116 673 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCDC90B-206ENST00000526265 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
CCDC90B-206ENST00000526265 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
CCDC90B-206ENST00000526265 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-206ENST00000526265 CHADLQ6NUI6 762 aa17.78■□□□□ 0.44
CCDC90B-206ENST00000526265 ECM2O94769 699 aaPredicted RBP17.76■□□□□ 0.43
CCDC90B-206ENST00000526265 GSE1Q14687 1217 aa17.76■□□□□ 0.43
CCDC90B-206ENST00000526265 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
CCDC90B-206ENST00000526265 PRKAR2AP13861 404 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-206ENST00000526265 WIZO95785 1651 aa17.74■□□□□ 0.43
CCDC90B-206ENST00000526265 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
CCDC90B-206ENST00000526265 SUPT5HO00267 1087 aaKnown RBP17.73■□□□□ 0.43
CCDC90B-206ENST00000526265 SP7Q8TDD2 431 aaPredicted RBP17.73■□□□□ 0.43
CCDC90B-206ENST00000526265 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
CCDC90B-206ENST00000526265 FAM212AQ96EL1 285 aa17.71■□□□□ 0.43
CCDC90B-206ENST00000526265 FARP1Q9Y4F1 1045 aaPredicted RBP17.7■□□□□ 0.42
CCDC90B-206ENST00000526265 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
CCDC90B-206ENST00000526265 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
CCDC90B-206ENST00000526265 DCAF8Q5TAQ9 597 aa17.66■□□□□ 0.42
CCDC90B-206ENST00000526265 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
CCDC90B-206ENST00000526265 RASEFQ8IZ41 740 aa17.65■□□□□ 0.42
CCDC90B-206ENST00000526265 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
CCDC90B-206ENST00000526265 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-206ENST00000526265 RGL2O15211 777 aa17.57■□□□□ 0.4
CCDC90B-206ENST00000526265 CHRM1P11229 460 aaPredicted RBP17.48■□□□□ 0.39
CCDC90B-206ENST00000526265 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
CCDC90B-206ENST00000526265 RNF25Q96BH1 459 aaPredicted RBP17.41■□□□□ 0.38
CCDC90B-206ENST00000526265 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.38
CCDC90B-206ENST00000526265 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
CCDC90B-206ENST00000526265 PYGBP11216 843 aa17.38■□□□□ 0.37
CCDC90B-206ENST00000526265 RIOK3O14730 519 aaKnown RBP17.37■□□□□ 0.37
CCDC90B-206ENST00000526265 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
CCDC90B-206ENST00000526265 CCDC61Q9Y6R9 512 aa17.35■□□□□ 0.37
CCDC90B-206ENST00000526265 SLC24A1O60721 1099 aa17.33■□□□□ 0.36
CCDC90B-206ENST00000526265 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-206ENST00000526265 VGFO15240 615 aaPredicted RBP17.27■□□□□ 0.35
CCDC90B-206ENST00000526265 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.35
CCDC90B-206ENST00000526265 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
CCDC90B-206ENST00000526265 HS6ST3Q8IZP7 471 aa17.24■□□□□ 0.35
CCDC90B-206ENST00000526265 ZNF467Q7Z7K2 595 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-206ENST00000526265 PLCB2Q00722 1185 aa17.22■□□□□ 0.35
CCDC90B-206ENST00000526265 SGIP1Q9BQI5 828 aa17.21■□□□□ 0.35
CCDC90B-206ENST00000526265 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
CCDC90B-206ENST00000526265 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.34
CCDC90B-206ENST00000526265 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
CCDC90B-206ENST00000526265 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
CCDC90B-206ENST00000526265 CFTRP13569 1480 aa17.19■□□□□ 0.34
CCDC90B-206ENST00000526265 LAMC3Q9Y6N6 1575 aa17.18■□□□□ 0.34
CCDC90B-206ENST00000526265 KIF12Q96FN5 646 aa17.15■□□□□ 0.34
CCDC90B-206ENST00000526265 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
CCDC90B-206ENST00000526265 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
CCDC90B-206ENST00000526265 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
CCDC90B-206ENST00000526265 STK25O00506 426 aa17.13■□□□□ 0.33
CCDC90B-206ENST00000526265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-206ENST00000526265 ZFP91Q96JP5 570 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-206ENST00000526265 PCDHB13Q9Y5F0 798 aa17.12■□□□□ 0.33
CCDC90B-206ENST00000526265 MAP3K13O43283 966 aa17.1■□□□□ 0.33
CCDC90B-206ENST00000526265 PCDHB8Q9UN66 801 aa17.09■□□□□ 0.33
CCDC90B-206ENST00000526265 PDAP1Q13442 181 aaKnown RBP17.08■□□□□ 0.32
CCDC90B-206ENST00000526265 PHF12Q96QT6 1004 aa17.06■□□□□ 0.32
CCDC90B-206ENST00000526265 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
CCDC90B-206ENST00000526265 IFNL1Q8IU54 200 aa17.04■□□□□ 0.32
CCDC90B-206ENST00000526265 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
CCDC90B-206ENST00000526265 STK24Q9Y6E0 443 aa17.04■□□□□ 0.32
CCDC90B-206ENST00000526265 NESP48681 1621 aa17.03■□□□□ 0.32
CCDC90B-206ENST00000526265 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.31
CCDC90B-206ENST00000526265 SPRYD3Q8NCJ5 442 aa17.02■□□□□ 0.31
CCDC90B-206ENST00000526265 HAX1O00165 279 aa17■□□□□ 0.31
CCDC90B-206ENST00000526265 PSEN1P49768 467 aa16.99■□□□□ 0.31
CCDC90B-206ENST00000526265 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
CCDC90B-206ENST00000526265 CFAP44Q96MT7 982 aa16.97■□□□□ 0.31
CCDC90B-206ENST00000526265 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
CCDC90B-206ENST00000526265 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
CCDC90B-206ENST00000526265 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
CCDC90B-206ENST00000526265 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
CCDC90B-206ENST00000526265 MS4A3Q96HJ5 214 aa16.9■□□□□ 0.3
CCDC90B-206ENST00000526265 CLCN6P51797 869 aa16.88■□□□□ 0.29
CCDC90B-206ENST00000526265 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
CCDC90B-206ENST00000526265 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
CCDC90B-206ENST00000526265 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
CCDC90B-206ENST00000526265 RYDENQ9NUL5 291 aaKnown RBP16.87■□□□□ 0.29
CCDC90B-206ENST00000526265 EVX2Q03828 476 aa16.85■□□□□ 0.29
CCDC90B-206ENST00000526265 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
CCDC90B-206ENST00000526265 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
CCDC90B-206ENST00000526265 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
CCDC90B-206ENST00000526265 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
CCDC90B-206ENST00000526265 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
CCDC90B-206ENST00000526265 CABP2Q9NPB3 220 aa16.77■□□□□ 0.27
CCDC90B-206ENST00000526265 CUX1P39880 1505 aa16.76■□□□□ 0.27
CCDC90B-206ENST00000526265 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
CCDC90B-206ENST00000526265 TIE1P35590 1138 aa16.76■□□□□ 0.27
CCDC90B-206ENST00000526265 TMEM106CQ9BVX2 250 aa16.76■□□□□ 0.27
CCDC90B-206ENST00000526265 TRPC6Q9Y210 931 aa16.76■□□□□ 0.27
CCDC90B-206ENST00000526265 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms