RNA–Protein interactions for RNA: ENST00000525373.5

LMO7-216, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 672 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-216ENST00000525373 FBLN2P98095 1184 aa8.64□□□□□ -1.03
LMO7-216ENST00000525373 PABPN1Q86U42 306 aaKnown RBP eCLIP8.63□□□□□ -1.03
LMO7-216ENST00000525373 MS4A3Q96HJ5 214 aa8.58□□□□□ -1.04
LMO7-216ENST00000525373 ATN1P54259 1190 aaPredicted RBP8.56□□□□□ -1.04
LMO7-216ENST00000525373 CREBZFQ9NS37 354 aa8.53□□□□□ -1.04
LMO7-216ENST00000525373 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
LMO7-216ENST00000525373 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
LMO7-216ENST00000525373 COLQQ9Y215 455 aaPredicted RBP8.47□□□□□ -1.05
LMO7-216ENST00000525373 TMEM121BQ9BXQ6 578 aaPredicted RBP8.43□□□□□ -1.06
LMO7-216ENST00000525373 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
LMO7-216ENST00000525373 PAK3O75914 559 aaPredicted RBP8.41□□□□□ -1.06
LMO7-216ENST00000525373 SLAIN1Q8ND83 568 aa8.41□□□□□ -1.06
LMO7-216ENST00000525373 SLC4A1APQ9BWU0 796 aaKnown RBP8.41□□□□□ -1.06
LMO7-216ENST00000525373 FOXD4L1Q9NU39 408 aa8.4□□□□□ -1.06
LMO7-216ENST00000525373 POTEB3A0JP26 581 aa8.38□□□□□ -1.07
LMO7-216ENST00000525373 POTEBQ6S5H4 581 aa8.38□□□□□ -1.07
LMO7-216ENST00000525373 BMP2KQ9NSY1 1161 aaPredicted RBP8.37□□□□□ -1.07
LMO7-216ENST00000525373 TRPC6Q9Y210 931 aa8.34□□□□□ -1.07
LMO7-216ENST00000525373 MNX1P50219 401 aaPredicted RBP8.29□□□□□ -1.08
LMO7-216ENST00000525373 SEC24BO95487 1268 aa8.24□□□□□ -1.09
LMO7-216ENST00000525373 HS3ST6Q96QI5 342 aa8.23□□□□□ -1.09
LMO7-216ENST00000525373 ATXN8OSP0DMR3 200 aa8.22□□□□□ -1.09
LMO7-216ENST00000525373 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
LMO7-216ENST00000525373 TIE1P35590 1138 aa8.19□□□□□ -1.1
LMO7-216ENST00000525373 EMP3P54852 163 aa8.19□□□□□ -1.1
LMO7-216ENST00000525373 KIF12Q96FN5 646 aa8.18□□□□□ -1.1
LMO7-216ENST00000525373 TTLL13PA6NNM8 815 aa8.17□□□□□ -1.1
LMO7-216ENST00000525373 CCDC61Q9Y6R9 512 aa8.16□□□□□ -1.1
LMO7-216ENST00000525373 IER5LQ5T953 404 aa8.15□□□□□ -1.1
LMO7-216ENST00000525373 NPM1P06748 294 aaKnown RBP eCLIP8.14□□□□□ -1.11
LMO7-216ENST00000525373 FAM205CA6NFA0 338 aa8.13□□□□□ -1.11
LMO7-216ENST00000525373 SNPHO15079 494 aa8.13□□□□□ -1.11
LMO7-216ENST00000525373 TRIM35Q9UPQ4 493 aa8.08□□□□□ -1.12
LMO7-216ENST00000525373 ZBTB22O15209 634 aa8.07□□□□□ -1.12
LMO7-216ENST00000525373 MAP3K13O43283 966 aa8.05□□□□□ -1.12
LMO7-216ENST00000525373 TSPYL2Q9H2G4 693 aaPredicted RBP8.04□□□□□ -1.12
LMO7-216ENST00000525373 MYT1LQ9UL68 1186 aa8.04□□□□□ -1.12
LMO7-216ENST00000525373 STAG3Q9UJ98 1225 aa8.01□□□□□ -1.13
LMO7-216ENST00000525373 IRX5P78411 483 aaPredicted RBP7.98□□□□□ -1.13
LMO7-216ENST00000525373 EHMT2Q96KQ7 1210 aa7.98□□□□□ -1.13
LMO7-216ENST00000525373 PLCG2P16885 1265 aa7.95□□□□□ -1.14
LMO7-216ENST00000525373 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.94□□□□□ -1.14
LMO7-216ENST00000525373 CSRNP3Q8WYN3 585 aa7.9□□□□□ -1.14
LMO7-216ENST00000525373 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
LMO7-216ENST00000525373 OCEL1Q9H607 264 aa7.82□□□□□ -1.16
LMO7-216ENST00000525373 HOXB3P14651 431 aaPredicted RBP7.78□□□□□ -1.16
LMO7-216ENST00000525373 TMEM106CQ9BVX2 250 aa7.78□□□□□ -1.16
LMO7-216ENST00000525373 PTGER2P43116 358 aa7.76□□□□□ -1.17
LMO7-216ENST00000525373 HOXB1P14653 301 aaPredicted RBP7.75□□□□□ -1.17
LMO7-216ENST00000525373 RASEFQ8IZ41 740 aa7.75□□□□□ -1.17
LMO7-216ENST00000525373 SGIP1Q9BQI5 828 aa7.75□□□□□ -1.17
LMO7-216ENST00000525373 IFNL1Q8IU54 200 aa7.74□□□□□ -1.17
LMO7-216ENST00000525373 PCDHB13Q9Y5F0 798 aa7.74□□□□□ -1.17
LMO7-216ENST00000525373 ERBB3P21860 1342 aa7.74□□□□□ -1.17
LMO7-216ENST00000525373 VARS2Q5ST30 1063 aaKnown RBP7.71□□□□□ -1.18
LMO7-216ENST00000525373 PDCD7Q8N8D1 485 aaKnown RBP7.71□□□□□ -1.18
LMO7-216ENST00000525373 C3orf67Q6ZVT6 689 aa7.69□□□□□ -1.18
LMO7-216ENST00000525373 IRX2Q9BZI1 471 aaPredicted RBP7.68□□□□□ -1.18
LMO7-216ENST00000525373 ZNF687Q8N1G0 1237 aa7.67□□□□□ -1.18
LMO7-216ENST00000525373 ANKRD13DQ6ZTN6 518 aa7.59□□□□□ -1.19
LMO7-216ENST00000525373 HCSTQ9UBK5 93 aa7.58□□□□□ -1.2
LMO7-216ENST00000525373 RGS20O76081 388 aa7.54□□□□□ -1.2
LMO7-216ENST00000525373 ZNF710Q8N1W2 664 aa7.54□□□□□ -1.2
LMO7-216ENST00000525373 L3MBTL3Q96JM7 780 aaPredicted RBP7.54□□□□□ -1.2
LMO7-216ENST00000525373 LOC100996750A0A140TA64 210 aa7.53□□□□□ -1.2
LMO7-216ENST00000525373 KRTAP4-6Q9BYQ5 205 aa7.53□□□□□ -1.2
LMO7-216ENST00000525373 LCE2BO14633 110 aa7.52□□□□□ -1.21
LMO7-216ENST00000525373 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
LMO7-216ENST00000525373 SPDYE4A6NLX3 237 aa7.5□□□□□ -1.21
LMO7-216ENST00000525373 DOK7Q18PE1 504 aa7.48□□□□□ -1.21
LMO7-216ENST00000525373 Q6ZNB5 142 aa7.44□□□□□ -1.22
LMO7-216ENST00000525373 POTEEQ6S8J3 1075 aa7.43□□□□□ -1.22
LMO7-216ENST00000525373 GPR153Q6NV75 609 aa7.42□□□□□ -1.22
LMO7-216ENST00000525373 ILDR1Q86SU0 546 aaPredicted RBP7.42□□□□□ -1.22
LMO7-216ENST00000525373 DPY19L2Q6NUT2 758 aa7.41□□□□□ -1.22
LMO7-216ENST00000525373 NUBP1P53384 320 aa7.38□□□□□ -1.23
LMO7-216ENST00000525373 A0A0G2JS52 829 aa7.36□□□□□ -1.23
LMO7-216ENST00000525373 ZSWIM6Q9HCJ5 1215 aa7.36□□□□□ -1.23
LMO7-216ENST00000525373 RIMBP2O15034 1052 aa7.35□□□□□ -1.23
LMO7-216ENST00000525373 IFFO2Q5TF58 517 aa7.35□□□□□ -1.23
LMO7-216ENST00000525373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.35□□□□□ -1.232e-9■■■□□ 16.7
LMO7-216ENST00000525373 PCDHB8Q9UN66 801 aa7.34□□□□□ -1.23
LMO7-216ENST00000525373 BOLA1Q9Y3E2 137 aa7.3□□□□□ -1.24
LMO7-216ENST00000525373 ZNF316A6NFI3 1004 aaPredicted RBP7.29□□□□□ -1.24
LMO7-216ENST00000525373 MKRN3Q13064 507 aaKnown RBP7.29□□□□□ -1.24
LMO7-216ENST00000525373 PROM2Q8N271 834 aa7.27□□□□□ -1.25
LMO7-216ENST00000525373 AXIN2Q9Y2T1 843 aa7.27□□□□□ -1.25
LMO7-216ENST00000525373 PBX2P40425 430 aa7.25□□□□□ -1.25
LMO7-216ENST00000525373 ARSIQ5FYB1 569 aa7.25□□□□□ -1.25
LMO7-216ENST00000525373 TMEM92Q6UXU6 159 aa7.25□□□□□ -1.25
LMO7-216ENST00000525373 KHSRPQ92945 711 aaKnown RBP eCLIP7.25□□□□□ -1.259e-7■■□□□ 12.9
LMO7-216ENST00000525373 ZNF775Q96BV0 537 aaPredicted RBP7.24□□□□□ -1.25
LMO7-216ENST00000525373 ADGRD1Q6QNK2 874 aa7.23□□□□□ -1.25
LMO7-216ENST00000525373 MIER1Q8N108 512 aa7.23□□□□□ -1.25
LMO7-216ENST00000525373 FKBP8Q14318 412 aa7.22□□□□□ -1.25
LMO7-216ENST00000525373 TRAF7Q6Q0C0 670 aa7.22□□□□□ -1.25
LMO7-216ENST00000525373 HRO43593 1189 aa7.21□□□□□ -1.26
LMO7-216ENST00000525373 PYGBP11216 843 aa7.21□□□□□ -1.26
LMO7-216ENST00000525373 KCTD12Q96CX2 325 aaKnown RBP7.2□□□□□ -1.26
LMO7-216ENST00000525373 FAM212AQ96EL1 285 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms