RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CDK11BP21127 795 aaKnown RBP9.85□□□□□ -0.83
SDC2-208ENST00000523877 BRD2P25440 801 aaKnown RBP9.85□□□□□ -0.83
SDC2-208ENST00000523877 HMGB1P09429 215 aaKnown RBP9.83□□□□□ -0.84
SDC2-208ENST00000523877 EVX2Q03828 476 aa9.83□□□□□ -0.84
SDC2-208ENST00000523877 TRIM26Q12899 539 aaPredicted RBP9.83□□□□□ -0.84
SDC2-208ENST00000523877 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
SDC2-208ENST00000523877 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
SDC2-208ENST00000523877 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
SDC2-208ENST00000523877 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
SDC2-208ENST00000523877 LOC105371045A0A1W2PR82 267 aa9.81□□□□□ -0.84
SDC2-208ENST00000523877 FBLN2P98095 1184 aa9.8□□□□□ -0.84
SDC2-208ENST00000523877 CHMP4AQ9BY43 222 aa9.8□□□□□ -0.84
SDC2-208ENST00000523877 VSIG10Q8N0Z9 540 aa9.76□□□□□ -0.85
SDC2-208ENST00000523877 HSP90B1P14625 803 aaKnown RBP9.75□□□□□ -0.85
SDC2-208ENST00000523877 SHROOM4Q9ULL8 1493 aa9.74□□□□□ -0.85
SDC2-208ENST00000523877 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
SDC2-208ENST00000523877 ZNF326Q5BKZ1 582 aaKnown RBP9.71□□□□□ -0.86
SDC2-208ENST00000523877 ANP32EQ9BTT0 268 aa9.71□□□□□ -0.86
SDC2-208ENST00000523877 CLEC11AQ9Y240 323 aa9.71□□□□□ -0.86
SDC2-208ENST00000523877 SSUH2Q9Y2M2 353 aa9.71□□□□□ -0.86
SDC2-208ENST00000523877 SPDYE1Q8NFV5 336 aaPredicted RBP9.69□□□□□ -0.86
SDC2-208ENST00000523877 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
SDC2-208ENST00000523877 SUPT5HO00267 1087 aaKnown RBP9.67□□□□□ -0.86
SDC2-208ENST00000523877 FGD1P98174 961 aa9.64□□□□□ -0.87
SDC2-208ENST00000523877 C19orf67A6NJJ6 358 aa9.63□□□□□ -0.87
SDC2-208ENST00000523877 ERICH6BQ5W0A0 696 aa9.6□□□□□ -0.87
SDC2-208ENST00000523877 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
SDC2-208ENST00000523877 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
SDC2-208ENST00000523877 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
SDC2-208ENST00000523877 DHX37Q8IY37 1157 aaKnown RBP9.59□□□□□ -0.87
SDC2-208ENST00000523877 BCCIPQ9P287 314 aaKnown RBP eCLIP9.59□□□□□ -0.87
SDC2-208ENST00000523877 RSPH4AQ5TD94 716 aa9.56□□□□□ -0.88
SDC2-208ENST00000523877 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
SDC2-208ENST00000523877 ANO8Q9HCE9 1232 aaPredicted RBP9.55□□□□□ -0.88
SDC2-208ENST00000523877 CLSPNQ9HAW4 1339 aa9.55□□□□□ -0.88
SDC2-208ENST00000523877 GABBR2O75899 941 aa9.54□□□□□ -0.88
SDC2-208ENST00000523877 PRR29P0C7W0 189 aa9.51□□□□□ -0.89
SDC2-208ENST00000523877 ZEB1P37275 1124 aaPredicted RBP9.49□□□□□ -0.89
SDC2-208ENST00000523877 PUS7Q96PZ0 661 aaKnown RBP9.49□□□□□ -0.89
SDC2-208ENST00000523877 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
SDC2-208ENST00000523877 CCDC9Q9Y3X0 531 aaKnown RBP9.49□□□□□ -0.89
SDC2-208ENST00000523877 NISCHQ9Y2I1 1504 aa9.48□□□□□ -0.89
SDC2-208ENST00000523877 GLIPR1L2Q4G1C9 344 aa9.47□□□□□ -0.89
SDC2-208ENST00000523877 MYT1LQ9UL68 1186 aa9.47□□□□□ -0.89
SDC2-208ENST00000523877 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
SDC2-208ENST00000523877 NAP1L5Q96NT1 182 aaPredicted RBP9.43□□□□□ -0.9
SDC2-208ENST00000523877 AAMPQ13685 434 aa9.42□□□□□ -0.9
SDC2-208ENST00000523877 KDM2AQ9Y2K7 1162 aa9.42□□□□□ -0.9
SDC2-208ENST00000523877 IGSF3O75054 1194 aa9.41□□□□□ -0.9
SDC2-208ENST00000523877 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
SDC2-208ENST00000523877 CD44P16070 742 aaKnown RBP9.39□□□□□ -0.91
SDC2-208ENST00000523877 LHX8Q68G74 356 aa9.39□□□□□ -0.91
SDC2-208ENST00000523877 ARID3AQ99856 593 aa9.39□□□□□ -0.91
SDC2-208ENST00000523877 POTEIP0CG38 1075 aa9.38□□□□□ -0.91
SDC2-208ENST00000523877 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
SDC2-208ENST00000523877 CLSTN1O94985 981 aa9.33□□□□□ -0.92
SDC2-208ENST00000523877 TICAM2Q86XR7 235 aa9.33□□□□□ -0.92
SDC2-208ENST00000523877 ZBTB7CA1YPR0 619 aa9.32□□□□□ -0.92
SDC2-208ENST00000523877 ABCC9O60706 1549 aa9.31□□□□□ -0.92
SDC2-208ENST00000523877 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
SDC2-208ENST00000523877 PAXIP1Q6ZW49 1069 aaPredicted RBP9.3□□□□□ -0.92
SDC2-208ENST00000523877 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
SDC2-208ENST00000523877 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.29□□□□□ -0.92
SDC2-208ENST00000523877 A0A0U1RQG5 324 aaPredicted RBP9.28□□□□□ -0.92
SDC2-208ENST00000523877 RBM10P98175 930 aaKnown RBP9.27□□□□□ -0.93
SDC2-208ENST00000523877 SPDYE4A6NLX3 237 aa9.26□□□□□ -0.93
SDC2-208ENST00000523877 NCLP19338 710 aaKnown RBP9.25□□□□□ -0.93
SDC2-208ENST00000523877 FKBP8Q14318 412 aa9.24□□□□□ -0.93
SDC2-208ENST00000523877 NBR1Q14596 966 aa9.24□□□□□ -0.93
SDC2-208ENST00000523877 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
SDC2-208ENST00000523877 SALL2Q9Y467 1007 aaPredicted RBP9.24□□□□□ -0.93
SDC2-208ENST00000523877 NPM1P06748 294 aaKnown RBP eCLIP9.23□□□□□ -0.93
SDC2-208ENST00000523877 PSMD1Q99460 953 aa9.23□□□□□ -0.93
SDC2-208ENST00000523877 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
SDC2-208ENST00000523877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.22□□□□□ -0.93
SDC2-208ENST00000523877 CFAP44Q96MT7 982 aa9.22□□□□□ -0.93
SDC2-208ENST00000523877 CLCN6P51797 869 aa9.21□□□□□ -0.94
SDC2-208ENST00000523877 GALR2O43603 387 aaPredicted RBP9.18□□□□□ -0.94
SDC2-208ENST00000523877 DCBLD2Q96PD2 775 aa9.18□□□□□ -0.94
SDC2-208ENST00000523877 ZNF592Q92610 1267 aa9.17□□□□□ -0.94
SDC2-208ENST00000523877 STAG3Q9UJ98 1225 aa9.17□□□□□ -0.94
SDC2-208ENST00000523877 YTHDC1Q96MU7 727 aaKnown RBP9.15□□□□□ -0.94
SDC2-208ENST00000523877 DEKP35659 375 aaKnown RBP9.14□□□□□ -0.95
SDC2-208ENST00000523877 TEX2Q8IWB9 1127 aa9.14□□□□□ -0.95
SDC2-208ENST00000523877 PTMSP20962 102 aa9.13□□□□□ -0.95
SDC2-208ENST00000523877 ZMYND15Q9H091 742 aa9.13□□□□□ -0.95
SDC2-208ENST00000523877 MNX1P50219 401 aaPredicted RBP9.12□□□□□ -0.95
SDC2-208ENST00000523877 IRX6P78412 446 aaPredicted RBP9.12□□□□□ -0.95
SDC2-208ENST00000523877 SETQ01105 290 aaPredicted RBP9.12□□□□□ -0.95
SDC2-208ENST00000523877 PHF12Q96QT6 1004 aa9.12□□□□□ -0.95
SDC2-208ENST00000523877 PLCD4Q9BRC7 762 aa9.12□□□□□ -0.95
SDC2-208ENST00000523877 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
SDC2-208ENST00000523877 ZFP91Q96JP5 570 aaPredicted RBP9.11□□□□□ -0.95
SDC2-208ENST00000523877 BRPF3Q9ULD4 1205 aa9.11□□□□□ -0.95
SDC2-208ENST00000523877 IPO4Q8TEX9 1081 aaKnown RBP9.1□□□□□ -0.95
SDC2-208ENST00000523877 NAP1L2Q9ULW6 460 aaPredicted RBP9.1□□□□□ -0.95
SDC2-208ENST00000523877 POTEB2H3BUK9 544 aa9.09□□□□□ -0.95
SDC2-208ENST00000523877 ARID4BQ4LE39 1312 aaPredicted RBP9.08□□□□□ -0.96
SDC2-208ENST00000523877 CHRM1P11229 460 aaPredicted RBP9.07□□□□□ -0.96
SDC2-208ENST00000523877 CERS3Q8IU89 383 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms