RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
PTPN12-215ENST00000522115 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
PTPN12-215ENST00000522115 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
PTPN12-215ENST00000522115 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
PTPN12-215ENST00000522115 CLCN6P51797 869 aa12.43□□□□□ -0.42
PTPN12-215ENST00000522115 CIZ1Q9ULV3 898 aaPredicted RBP12.42□□□□□ -0.42
PTPN12-215ENST00000522115 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
PTPN12-215ENST00000522115 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
PTPN12-215ENST00000522115 PKD2Q13563 968 aa12.38□□□□□ -0.43
PTPN12-215ENST00000522115 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
PTPN12-215ENST00000522115 PHF12Q96QT6 1004 aa12.35□□□□□ -0.43
PTPN12-215ENST00000522115 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
PTPN12-215ENST00000522115 PYGBP11216 843 aa12.31□□□□□ -0.44
PTPN12-215ENST00000522115 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
PTPN12-215ENST00000522115 MAP3K13O43283 966 aa12.28□□□□□ -0.44
PTPN12-215ENST00000522115 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.45
PTPN12-215ENST00000522115 GABBR2O75899 941 aa12.26□□□□□ -0.45
PTPN12-215ENST00000522115 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
PTPN12-215ENST00000522115 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
PTPN12-215ENST00000522115 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
PTPN12-215ENST00000522115 GALR2O43603 387 aaPredicted RBP12.21□□□□□ -0.45
PTPN12-215ENST00000522115 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
PTPN12-215ENST00000522115 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
PTPN12-215ENST00000522115 RIOK3O14730 519 aaKnown RBP12.18□□□□□ -0.46
PTPN12-215ENST00000522115 RGL2O15211 777 aa12.16□□□□□ -0.46
PTPN12-215ENST00000522115 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
PTPN12-215ENST00000522115 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
PTPN12-215ENST00000522115 TIE1P35590 1138 aa12.12□□□□□ -0.47
PTPN12-215ENST00000522115 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
PTPN12-215ENST00000522115 VGFO15240 615 aaPredicted RBP12.11□□□□□ -0.47
PTPN12-215ENST00000522115 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
PTPN12-215ENST00000522115 PSEN1P49768 467 aa12.07□□□□□ -0.48
PTPN12-215ENST00000522115 ASTLQ6HA08 431 aaPredicted RBP12.07□□□□□ -0.48
PTPN12-215ENST00000522115 BMP2KQ9NSY1 1161 aaPredicted RBP12.07□□□□□ -0.48
PTPN12-215ENST00000522115 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
PTPN12-215ENST00000522115 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
PTPN12-215ENST00000522115 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
PTPN12-215ENST00000522115 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
PTPN12-215ENST00000522115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.01□□□□□ -0.49
PTPN12-215ENST00000522115 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
PTPN12-215ENST00000522115 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
PTPN12-215ENST00000522115 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
PTPN12-215ENST00000522115 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
PTPN12-215ENST00000522115 STK25O00506 426 aa11.94□□□□□ -0.5
PTPN12-215ENST00000522115 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
PTPN12-215ENST00000522115 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
PTPN12-215ENST00000522115 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
PTPN12-215ENST00000522115 IER5LQ5T953 404 aa11.92□□□□□ -0.5
PTPN12-215ENST00000522115 PELP1Q8IZL8 1130 aaKnown RBP11.92□□□□□ -0.5
PTPN12-215ENST00000522115 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
PTPN12-215ENST00000522115 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
PTPN12-215ENST00000522115 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
PTPN12-215ENST00000522115 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
PTPN12-215ENST00000522115 C7P10643 843 aa11.88□□□□□ -0.51
PTPN12-215ENST00000522115 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
PTPN12-215ENST00000522115 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
PTPN12-215ENST00000522115 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
PTPN12-215ENST00000522115 MKRN3Q13064 507 aaKnown RBP11.84□□□□□ -0.51
PTPN12-215ENST00000522115 SOX12O15370 315 aa11.83□□□□□ -0.52
PTPN12-215ENST00000522115 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
PTPN12-215ENST00000522115 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
PTPN12-215ENST00000522115 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
PTPN12-215ENST00000522115 LHX8Q68G74 356 aa11.78□□□□□ -0.52
PTPN12-215ENST00000522115 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
PTPN12-215ENST00000522115 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
PTPN12-215ENST00000522115 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
PTPN12-215ENST00000522115 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
PTPN12-215ENST00000522115 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
PTPN12-215ENST00000522115 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
PTPN12-215ENST00000522115 MFRPQ9BY79 579 aa11.75□□□□□ -0.53
PTPN12-215ENST00000522115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.533e-7■■■■□ 21.9
PTPN12-215ENST00000522115 PLCG2P16885 1265 aa11.74□□□□□ -0.53
PTPN12-215ENST00000522115 NLRP6P59044 892 aa11.74□□□□□ -0.53
PTPN12-215ENST00000522115 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
PTPN12-215ENST00000522115 SEC24BO95487 1268 aa11.73□□□□□ -0.53
PTPN12-215ENST00000522115 RYDENQ9NUL5 291 aaKnown RBP11.73□□□□□ -0.53
PTPN12-215ENST00000522115 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
PTPN12-215ENST00000522115 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
PTPN12-215ENST00000522115 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
PTPN12-215ENST00000522115 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.66□□□□□ -0.54
PTPN12-215ENST00000522115 POTEB2H3BUK9 544 aa11.62□□□□□ -0.55
PTPN12-215ENST00000522115 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
PTPN12-215ENST00000522115 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
PTPN12-215ENST00000522115 TMEM121BQ9BXQ6 578 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-215ENST00000522115 SPRYD3Q8NCJ5 442 aa11.59□□□□□ -0.55
PTPN12-215ENST00000522115 BOLA1Q9Y3E2 137 aa11.58□□□□□ -0.56
PTPN12-215ENST00000522115 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
PTPN12-215ENST00000522115 PPP1R37O75864 691 aa11.55□□□□□ -0.56
PTPN12-215ENST00000522115 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
PTPN12-215ENST00000522115 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
PTPN12-215ENST00000522115 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
PTPN12-215ENST00000522115 G3V3G9 751 aa11.51□□□□□ -0.57
PTPN12-215ENST00000522115 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
PTPN12-215ENST00000522115 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
PTPN12-215ENST00000522115 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
PTPN12-215ENST00000522115 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
PTPN12-215ENST00000522115 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
PTPN12-215ENST00000522115 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
PTPN12-215ENST00000522115 KIF3CO14782 793 aa11.37□□□□□ -0.59
PTPN12-215ENST00000522115 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 597.2 ms