RNA–Protein interactions for RNA: ENST00000521922.5

UBR5-212, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBR5, Length 9,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-212ENST00000521922 TMC1Q8TDI8 760 aa19.23■□□□□ 0.67
UBR5-212ENST00000521922 RTN4Q9NQC3 1192 aaKnown RBP19.23■□□□□ 0.67
UBR5-212ENST00000521922 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.675e-12■□□□□ 10
UBR5-212ENST00000521922 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
UBR5-212ENST00000521922 TAOK2Q9UL54 1235 aa19.18■□□□□ 0.66
UBR5-212ENST00000521922 MSNP26038 577 aaKnown RBP19.18■□□□□ 0.66
UBR5-212ENST00000521922 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
UBR5-212ENST00000521922 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
UBR5-212ENST00000521922 DRC7Q8IY82 874 aa19.13■□□□□ 0.65
UBR5-212ENST00000521922 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
UBR5-212ENST00000521922 A0A0U1RQG5 324 aaPredicted RBP19.1■□□□□ 0.65
UBR5-212ENST00000521922 FGD1P98174 961 aa19.08■□□□□ 0.65
UBR5-212ENST00000521922 GOLGA6L1Q8N7Z2 621 aa19.06■□□□□ 0.64
UBR5-212ENST00000521922 GOLGA6L4A6NEF3 574 aa19.04■□□□□ 0.64
UBR5-212ENST00000521922 NAP1L2Q9ULW6 460 aaPredicted RBP19.03■□□□□ 0.64
UBR5-212ENST00000521922 ARID4BQ4LE39 1312 aaPredicted RBP19.02■□□□□ 0.64
UBR5-212ENST00000521922 NPHP1O15259 732 aa19.02■□□□□ 0.64
UBR5-212ENST00000521922 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
UBR5-212ENST00000521922 SETQ01105 290 aaPredicted RBP19.01■□□□□ 0.63
UBR5-212ENST00000521922 HSP90AB1P08238 724 aaKnown RBP19■□□□□ 0.63
UBR5-212ENST00000521922 TONSLQ96HA7 1378 aa18.99■□□□□ 0.63
UBR5-212ENST00000521922 FBLN2P98095 1184 aa18.98■□□□□ 0.63
UBR5-212ENST00000521922 USP35Q9P2H5 1018 aa18.98■□□□□ 0.63
UBR5-212ENST00000521922 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
UBR5-212ENST00000521922 GOLGA2Q08379 1002 aa18.97■□□□□ 0.63
UBR5-212ENST00000521922 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
UBR5-212ENST00000521922 KCNJ4P48050 445 aa18.95■□□□□ 0.62
UBR5-212ENST00000521922 IRX6P78412 446 aaPredicted RBP18.95■□□□□ 0.62
UBR5-212ENST00000521922 FTSJ3Q8IY81 847 aaKnown RBP18.94■□□□□ 0.62
UBR5-212ENST00000521922 ARID3AQ99856 593 aa18.94■□□□□ 0.62
UBR5-212ENST00000521922 ZNF777Q9ULD5 760 aaPredicted RBP18.92■□□□□ 0.62
UBR5-212ENST00000521922 C14orf37Q86TY3 774 aa18.92■□□□□ 0.62
UBR5-212ENST00000521922 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
UBR5-212ENST00000521922 DDX10Q13206 875 aaKnown RBP18.91■□□□□ 0.62
UBR5-212ENST00000521922 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
UBR5-212ENST00000521922 GNL2Q13823 731 aaKnown RBP18.86■□□□□ 0.61
UBR5-212ENST00000521922 LAS1LQ9Y4W2 734 aaKnown RBP18.86■□□□□ 0.61
UBR5-212ENST00000521922 MRS2Q9HD23 443 aa18.85■□□□□ 0.61
UBR5-212ENST00000521922 PDE4CQ08493 712 aa18.83■□□□□ 0.61
UBR5-212ENST00000521922 ISY1Q9ULR0 285 aaKnown RBP18.82■□□□□ 0.6
UBR5-212ENST00000521922 HAP1P54257 671 aaPredicted RBP18.82■□□□□ 0.6
UBR5-212ENST00000521922 OS9Q13438 667 aaPredicted RBP18.81■□□□□ 0.6
UBR5-212ENST00000521922 KRI1Q8N9T8 703 aaKnown RBP18.81■□□□□ 0.6
UBR5-212ENST00000521922 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
UBR5-212ENST00000521922 PTMSP20962 102 aa18.77■□□□□ 0.6
UBR5-212ENST00000521922 CEP89Q96ST8 783 aa18.77■□□□□ 0.6
UBR5-212ENST00000521922 ARID3CA6NKF2 412 aa18.76■□□□□ 0.59
UBR5-212ENST00000521922 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
UBR5-212ENST00000521922 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
UBR5-212ENST00000521922 NOP58Q9Y2X3 529 aaKnown RBP18.75■□□□□ 0.59
UBR5-212ENST00000521922 PATL2C9JE40 543 aaKnown RBP18.74■□□□□ 0.59
UBR5-212ENST00000521922 MCCP23508 829 aa18.73■□□□□ 0.59
UBR5-212ENST00000521922 KAT6BQ8WYB5 2073 aa18.72■□□□□ 0.59
UBR5-212ENST00000521922 TPM4P67936 248 aa18.72■□□□□ 0.59
UBR5-212ENST00000521922 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
UBR5-212ENST00000521922 CHMP4BQ9H444 224 aaKnown RBP18.68■□□□□ 0.58
UBR5-212ENST00000521922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.581e-6■■□□□ 14.1
UBR5-212ENST00000521922 KDM2AQ9Y2K7 1162 aa18.66■□□□□ 0.58
UBR5-212ENST00000521922 CCDC34Q96HJ3 373 aa18.64■□□□□ 0.57
UBR5-212ENST00000521922 RGS3P49796 1198 aa18.63■□□□□ 0.57
UBR5-212ENST00000521922 CFAP53Q96M91 514 aa18.63■□□□□ 0.57
UBR5-212ENST00000521922 SYAP1Q96A49 352 aaPredicted RBP18.62■□□□□ 0.57
UBR5-212ENST00000521922 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
UBR5-212ENST00000521922 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
UBR5-212ENST00000521922 DEKP35659 375 aaKnown RBP18.59■□□□□ 0.57
UBR5-212ENST00000521922 TPM3P06753 285 aa18.59■□□□□ 0.57
UBR5-212ENST00000521922 ANO8Q9HCE9 1232 aaPredicted RBP18.58■□□□□ 0.57
UBR5-212ENST00000521922 TAF7LQ5H9L4 462 aa18.58■□□□□ 0.57
UBR5-212ENST00000521922 SPRYD3Q8NCJ5 442 aa18.58■□□□□ 0.57
UBR5-212ENST00000521922 CFAP44Q96MT7 982 aa18.58■□□□□ 0.56
UBR5-212ENST00000521922 CREBRFQ8IUR6 639 aa18.57■□□□□ 0.56
UBR5-212ENST00000521922 HSP90AA2PQ14568 343 aaPredicted RBP18.56■□□□□ 0.56
UBR5-212ENST00000521922 GBP4Q96PP9 640 aa18.56■□□□□ 0.56
UBR5-212ENST00000521922 KIAA1211Q6ZU35 1233 aa18.55■□□□□ 0.56
UBR5-212ENST00000521922 APPP05067 770 aa18.55■□□□□ 0.56
UBR5-212ENST00000521922 EIF4G2P78344 907 aaKnown RBP eCLIP18.55■□□□□ 0.56
UBR5-212ENST00000521922 GPS2Q13227 327 aa18.54■□□□□ 0.56
UBR5-212ENST00000521922 MS4A1P11836 297 aa18.53■□□□□ 0.56
UBR5-212ENST00000521922 CCDC70Q6NSX1 233 aa18.53■□□□□ 0.56
UBR5-212ENST00000521922 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
UBR5-212ENST00000521922 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
UBR5-212ENST00000521922 GZF1Q9H116 711 aaPredicted RBP18.51■□□□□ 0.55
UBR5-212ENST00000521922 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
UBR5-212ENST00000521922 TSR1Q2NL82 804 aaKnown RBP18.51■□□□□ 0.55
UBR5-212ENST00000521922 FRAT1Q92837 279 aaPredicted RBP18.5■□□□□ 0.55
UBR5-212ENST00000521922 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
UBR5-212ENST00000521922 SUPT16HQ9Y5B9 1047 aaKnown RBP18.49■□□□□ 0.55
UBR5-212ENST00000521922 ZNF771Q7L3S4 317 aaPredicted RBP18.49■□□□□ 0.55
UBR5-212ENST00000521922 RASSF8Q8NHQ8 419 aa18.48■□□□□ 0.55
UBR5-212ENST00000521922 KNSTRNQ9Y448 316 aa18.46■□□□□ 0.55
UBR5-212ENST00000521922 HMMRO75330 724 aa18.45■□□□□ 0.54
UBR5-212ENST00000521922 PHF14O94880 888 aa18.45■□□□□ 0.54
UBR5-212ENST00000521922 CCAR2Q8N163 923 aaKnown RBP18.45■□□□□ 0.54
UBR5-212ENST00000521922 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
UBR5-212ENST00000521922 MAP7D2Q96T17 732 aa18.45■□□□□ 0.54
UBR5-212ENST00000521922 PES1O00541 588 aaKnown RBP18.45■□□□□ 0.54
UBR5-212ENST00000521922 CSPP1Q1MSJ5 1256 aa18.44■□□□□ 0.54
UBR5-212ENST00000521922 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
UBR5-212ENST00000521922 WWC1Q8IX03 1113 aa18.44■□□□□ 0.54
UBR5-212ENST00000521922 TEX35Q5T0J7 233 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms