RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	PIP4P2	Q8N4L2	257 aa		11.73	□□□□□ -0.53
CTNNA1-222	ENST00000520400	FAM212A	Q96EL1	285 aa		11.7	□□□□□ -0.54
CTNNA1-222	ENST00000520400	PLCB2	Q00722	1185 aa		11.69	□□□□□ -0.54
CTNNA1-222	ENST00000520400	TRIM41	Q8WV44	630 aa		11.67	□□□□□ -0.54
CTNNA1-222	ENST00000520400	PYGB	P11216	843 aa		11.66	□□□□□ -0.54
CTNNA1-222	ENST00000520400	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.65	□□□□□ -0.54
CTNNA1-222	ENST00000520400	CHGA	P10645	457 aa	Known RBP	11.62	□□□□□ -0.55
CTNNA1-222	ENST00000520400	CHRM1	P11229	460 aa	Predicted RBP	11.62	□□□□□ -0.55
CTNNA1-222	ENST00000520400	BBX	Q8WY36	941 aa	Predicted RBP	11.6	□□□□□ -0.55
CTNNA1-222	ENST00000520400	RIOK3	O14730	519 aa	Known RBP	11.59	□□□□□ -0.55
CTNNA1-222	ENST00000520400	CCDC61	Q9Y6R9	512 aa		11.58	□□□□□ -0.56
CTNNA1-222	ENST00000520400	HS6ST3	Q8IZP7	471 aa		11.56	□□□□□ -0.56
CTNNA1-222	ENST00000520400	NKX1-1	Q15270	411 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNNA1-222	ENST00000520400	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.53	□□□□□ -0.56
CTNNA1-222	ENST00000520400	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNNA1-222	ENST00000520400	HAP1	P54257	671 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNNA1-222	ENST00000520400	ZFP91	Q96JP5	570 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNNA1-222	ENST00000520400	CFAP44	Q96MT7	982 aa		11.49	□□□□□ -0.57
CTNNA1-222	ENST00000520400	PCDHB8	Q9UN66	801 aa		11.49	□□□□□ -0.57
CTNNA1-222	ENST00000520400	PCDHB13	Q9Y5F0	798 aa		11.49	□□□□□ -0.57
CTNNA1-222	ENST00000520400	VGF	O15240	615 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNNA1-222	ENST00000520400	DNAJC5	Q9H3Z4	198 aa		11.48	□□□□□ -0.57
CTNNA1-222	ENST00000520400	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNNA1-222	ENST00000520400	STK25	O00506	426 aa		11.46	□□□□□ -0.57
CTNNA1-222	ENST00000520400	SGIP1	Q9BQI5	828 aa		11.45	□□□□□ -0.58
CTNNA1-222	ENST00000520400	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNNA1-222	ENST00000520400	MAP3K13	O43283	966 aa		11.43	□□□□□ -0.58
CTNNA1-222	ENST00000520400	KIF12	Q96FN5	646 aa		11.43	□□□□□ -0.58
CTNNA1-222	ENST00000520400	CD44	P16070	742 aa	Known RBP	11.42	□□□□□ -0.58
CTNNA1-222	ENST00000520400	PHF12	Q96QT6	1004 aa		11.42	□□□□□ -0.58
CTNNA1-222	ENST00000520400	TSHZ2	Q9NRE2	1034 aa		11.42	□□□□□ -0.58
CTNNA1-222	ENST00000520400	IFNL1	Q8IU54	200 aa		11.41	□□□□□ -0.58
CTNNA1-222	ENST00000520400	SPRYD3	Q8NCJ5	442 aa		11.41	□□□□□ -0.58
CTNNA1-222	ENST00000520400	ZRANB1	Q9UGI0	708 aa		11.41	□□□□□ -0.58
CTNNA1-222	ENST00000520400	KDM2A	Q9Y2K7	1162 aa		11.4	□□□□□ -0.58
CTNNA1-222	ENST00000520400	STK24	Q9Y6E0	443 aa		11.4	□□□□□ -0.58
CTNNA1-222	ENST00000520400	GTPBP6	O43824	516 aa	Predicted RBP	11.39	□□□□□ -0.59
CTNNA1-222	ENST00000520400	C19orf67	A6NJJ6	358 aa		11.38	□□□□□ -0.59
CTNNA1-222	ENST00000520400	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.37	□□□□□ -0.59
CTNNA1-222	ENST00000520400	ZNF579	Q8NAF0	562 aa	Known RBP	11.37	□□□□□ -0.59
CTNNA1-222	ENST00000520400	PAK3	O75914	559 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNNA1-222	ENST00000520400	EVX2	Q03828	476 aa		11.34	□□□□□ -0.59
CTNNA1-222	ENST00000520400	PDAP1	Q13442	181 aa	Known RBP	11.34	□□□□□ -0.59
CTNNA1-222	ENST00000520400	TAOK2	Q9UL54	1235 aa		11.34	□□□□□ -0.59
CTNNA1-222	ENST00000520400	TRPC6	Q9Y210	931 aa		11.34	□□□□□ -0.59
CTNNA1-222	ENST00000520400	PSEN1	P49768	467 aa		11.33	□□□□□ -0.6
CTNNA1-222	ENST00000520400	VSIG10	Q8N0Z9	540 aa		11.29	□□□□□ -0.6
CTNNA1-222	ENST00000520400	MS4A3	Q96HJ5	214 aa		11.28	□□□□□ -0.6
CTNNA1-222	ENST00000520400	MFRP	Q9BY79	579 aa		11.24	□□□□□ -0.61
CTNNA1-222	ENST00000520400	EFCAB3	Q8N7B9	438 aa		11.21	□□□□□ -0.61
CTNNA1-222	ENST00000520400	CABP2	Q9NPB3	220 aa		11.21	□□□□□ -0.61
CTNNA1-222	ENST00000520400	GALR2	O43603	387 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNNA1-222	ENST00000520400	HAX1	O00165	279 aa		11.18	□□□□□ -0.62
CTNNA1-222	ENST00000520400	PPP1R37	O75864	691 aa		11.17	□□□□□ -0.62
CTNNA1-222	ENST00000520400	FBXO22	Q8NEZ5	403 aa		11.17	□□□□□ -0.62
CTNNA1-222	ENST00000520400	CADPS2	Q86UW7	1296 aa		11.16	□□□□□ -0.62
CTNNA1-222	ENST00000520400	PHF8	Q9UPP1	1060 aa		11.16	□□□□□ -0.62
CTNNA1-222	ENST00000520400	TMEM106C	Q9BVX2	250 aa		11.15	□□□□□ -0.62
CTNNA1-222	ENST00000520400	SP7	Q8TDD2	431 aa	Predicted RBP	11.13	□□□□□ -0.63
CTNNA1-222	ENST00000520400	MS4A4A	Q96JQ5	239 aa		11.13	□□□□□ -0.63
CTNNA1-222	ENST00000520400	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNNA1-222	ENST00000520400	TTLL13P	A6NNM8	815 aa		11.11	□□□□□ -0.63
CTNNA1-222	ENST00000520400	SOX12	O15370	315 aa		11.06	□□□□□ -0.64
CTNNA1-222	ENST00000520400	TIE1	P35590	1138 aa		11.06	□□□□□ -0.64
CTNNA1-222	ENST00000520400	RYDEN	Q9NUL5	291 aa	Known RBP	11.05	□□□□□ -0.64
CTNNA1-222	ENST00000520400	NLRP6	P59044	892 aa		11.04	□□□□□ -0.64
CTNNA1-222	ENST00000520400	ATN1	P54259	1190 aa	Predicted RBP	11.01	□□□□□ -0.65
CTNNA1-222	ENST00000520400	TRIM35	Q9UPQ4	493 aa		11.01	□□□□□ -0.65
CTNNA1-222	ENST00000520400	ILDR1	Q86SU0	546 aa	Predicted RBP	11	□□□□□ -0.65
CTNNA1-222	ENST00000520400	GABBR2	O75899	941 aa		10.99	□□□□□ -0.65
CTNNA1-222	ENST00000520400	ATMIN	O43313	823 aa	Predicted RBP	10.98	□□□□□ -0.65
CTNNA1-222	ENST00000520400	BCAN	Q96GW7	911 aa		10.97	□□□□□ -0.65
CTNNA1-222	ENST00000520400	DPY19L2	Q6NUT2	758 aa		10.96	□□□□□ -0.65
CTNNA1-222	ENST00000520400	ASTL	Q6HA08	431 aa	Predicted RBP	10.95	□□□□□ -0.66
CTNNA1-222	ENST00000520400	PELP1	Q8IZL8	1130 aa	Known RBP	10.95	□□□□□ -0.66
CTNNA1-222	ENST00000520400	GOLGA2	Q08379	1002 aa		10.94	□□□□□ -0.66
CTNNA1-222	ENST00000520400	MKRN3	Q13064	507 aa	Known RBP	10.94	□□□□□ -0.66
CTNNA1-222	ENST00000520400	NCKAP5L	Q9HCH0	1330 aa		10.93	□□□□□ -0.66
CTNNA1-222	ENST00000520400	PDCD7	Q8N8D1	485 aa	Known RBP	10.93	□□□□□ -0.66
CTNNA1-222	ENST00000520400	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.92	□□□□□ -0.66	4e-8	■■□□□ 11.9
CTNNA1-222	ENST00000520400	IRX5	P78411	483 aa	Predicted RBP	10.89	□□□□□ -0.67
CTNNA1-222	ENST00000520400	POTEI	P0CG38	1075 aa		10.88	□□□□□ -0.67
CTNNA1-222	ENST00000520400	PRKCSH	P14314	528 aa	Predicted RBP	10.88	□□□□□ -0.67
CTNNA1-222	ENST00000520400	CLCN6	P51797	869 aa		10.88	□□□□□ -0.67
CTNNA1-222	ENST00000520400	KCNV2	Q8TDN2	545 aa		10.87	□□□□□ -0.67
CTNNA1-222	ENST00000520400	CRISPLD2	Q9H0B8	497 aa		10.85	□□□□□ -0.67
CTNNA1-222	ENST00000520400	POTEF	A5A3E0	1075 aa		10.84	□□□□□ -0.67
CTNNA1-222	ENST00000520400	COLQ	Q9Y215	455 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNNA1-222	ENST00000520400	MICALL2	Q8IY33	904 aa		10.8	□□□□□ -0.68
CTNNA1-222	ENST00000520400	LARP6	Q9BRS8	491 aa	Known RBP	10.8	□□□□□ -0.68
CTNNA1-222	ENST00000520400	MFSD10	Q14728	455 aa		10.79	□□□□□ -0.68
CTNNA1-222	ENST00000520400	IER5L	Q5T953	404 aa		10.79	□□□□□ -0.68
CTNNA1-222	ENST00000520400	OCEL1	Q9H607	264 aa		10.79	□□□□□ -0.68
CTNNA1-222	ENST00000520400	WDR70	Q9NW82	654 aa		10.78	□□□□□ -0.68
CTNNA1-222	ENST00000520400	NBR1	Q14596	966 aa		10.76	□□□□□ -0.69
CTNNA1-222	ENST00000520400	DCBLD2	Q96PD2	775 aa		10.76	□□□□□ -0.69
CTNNA1-222	ENST00000520400	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.76	□□□□□ -0.69
CTNNA1-222	ENST00000520400	PDE4A	P27815	886 aa		10.73	□□□□□ -0.69
CTNNA1-222	ENST00000520400	E2F4	Q16254	413 aa		10.73	□□□□□ -0.69
CTNNA1-222	ENST00000520400	TMEM92	Q6UXU6	159 aa		10.73	□□□□□ -0.69

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