RNA–Protein interactions for RNA: ENST00000519993.5

PTK2-218, Transcript of protein tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene PTK2, Length 4,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-218ENST00000519993 VPS8Q8N3P4 1428 aa23.96■■□□□ 1.43
PTK2-218ENST00000519993 CCNB3Q8WWL7 1395 aa23.95■■□□□ 1.43
PTK2-218ENST00000519993 NBR1Q14596 966 aa23.95■■□□□ 1.42
PTK2-218ENST00000519993 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
PTK2-218ENST00000519993 CANXP27824 592 aaKnown RBP23.91■■□□□ 1.42
PTK2-218ENST00000519993 ANP32EQ9BTT0 268 aa23.89■■□□□ 1.41
PTK2-218ENST00000519993 WIZO95785 1651 aa23.89■■□□□ 1.41
PTK2-218ENST00000519993 BCL11AQ9H165 835 aa23.83■■□□□ 1.4
PTK2-218ENST00000519993 ZBTB47Q9UFB7 747 aaPredicted RBP23.8■■□□□ 1.4
PTK2-218ENST00000519993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.79■■□□□ 1.43e-7■■■■□ 25.2
PTK2-218ENST00000519993 RUSC2Q8N2Y8 1516 aa23.78■■□□□ 1.4
PTK2-218ENST00000519993 TSPY4P0CV99 314 aa23.74■■□□□ 1.39
PTK2-218ENST00000519993 TSPY10P0CW01 314 aa23.74■■□□□ 1.39
PTK2-218ENST00000519993 CARMIL1Q5VZK9 1371 aa23.68■■□□□ 1.38
PTK2-218ENST00000519993 RAB3GAP2Q9H2M9 1393 aa23.67■■□□□ 1.38
PTK2-218ENST00000519993 CUX2O14529 1486 aa23.65■■□□□ 1.38
PTK2-218ENST00000519993 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
PTK2-218ENST00000519993 KCNH8Q96L42 1107 aa23.64■■□□□ 1.38
PTK2-218ENST00000519993 B4GALNT3Q6L9W6 998 aa23.64■■□□□ 1.37
PTK2-218ENST00000519993 RAPGEF2Q9Y4G8 1499 aa23.62■■□□□ 1.37
PTK2-218ENST00000519993 CHGAP10645 457 aaKnown RBP23.61■■□□□ 1.37
PTK2-218ENST00000519993 RGL3Q3MIN7 710 aa23.61■■□□□ 1.37
PTK2-218ENST00000519993 TIMELESSQ9UNS1 1208 aa23.61■■□□□ 1.37
PTK2-218ENST00000519993 RBM19Q9Y4C8 960 aaKnown RBP23.61■■□□□ 1.37
PTK2-218ENST00000519993 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
PTK2-218ENST00000519993 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
PTK2-218ENST00000519993 PPP4R2Q9NY27 417 aa23.59■■□□□ 1.37
PTK2-218ENST00000519993 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
PTK2-218ENST00000519993 CCER2I3L3R5 266 aa23.58■■□□□ 1.37
PTK2-218ENST00000519993 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
PTK2-218ENST00000519993 WDR43Q15061 677 aaKnown RBP eCLIP23.56■■□□□ 1.36
PTK2-218ENST00000519993 DHX57Q6P158 1386 aaKnown RBP23.55■■□□□ 1.36
PTK2-218ENST00000519993 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
PTK2-218ENST00000519993 EIF5BO60841 1220 aaKnown RBP23.53■■□□□ 1.36
PTK2-218ENST00000519993 PPP1R15AO75807 674 aaPredicted RBP23.52■■□□□ 1.35
PTK2-218ENST00000519993 CARD11Q9BXL7 1154 aa23.52■■□□□ 1.35
PTK2-218ENST00000519993 HSPA5P11021 654 aaKnown RBP23.51■■□□□ 1.35
PTK2-218ENST00000519993 FOXD1Q16676 465 aa23.5■■□□□ 1.35
PTK2-218ENST00000519993 NEFMP07197 916 aa23.48■■□□□ 1.35
PTK2-218ENST00000519993 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.47■■□□□ 1.35
PTK2-218ENST00000519993 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.35
PTK2-218ENST00000519993 UPF2Q9HAU5 1272 aaKnown RBP23.42■■□□□ 1.34
PTK2-218ENST00000519993 ARXQ96QS3 562 aa23.41■■□□□ 1.34
PTK2-218ENST00000519993 ARHGAP35Q9NRY4 1499 aa23.4■■□□□ 1.34
PTK2-218ENST00000519993 SLC24A1O60721 1099 aa23.37■■□□□ 1.33
PTK2-218ENST00000519993 NOP58Q9Y2X3 529 aaKnown RBP23.34■■□□□ 1.33
PTK2-218ENST00000519993 HSP90AA1P07900 732 aaKnown RBP23.33■■□□□ 1.33
PTK2-218ENST00000519993 LAS1LQ9Y4W2 734 aaKnown RBP23.32■■□□□ 1.32
PTK2-218ENST00000519993 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
PTK2-218ENST00000519993 SENP3Q9H4L4 574 aaPredicted RBP23.3■■□□□ 1.32
PTK2-218ENST00000519993 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
PTK2-218ENST00000519993 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
PTK2-218ENST00000519993 MPHOSPH9Q99550 1183 aa23.28■■□□□ 1.32
PTK2-218ENST00000519993 CC2D1BQ5T0F9 858 aaKnown RBP23.28■■□□□ 1.32
PTK2-218ENST00000519993 FHOD3Q2V2M9 1422 aa23.27■■□□□ 1.32
PTK2-218ENST00000519993 L3MBTL2Q969R5 705 aa23.26■■□□□ 1.31
PTK2-218ENST00000519993 ATAD2BQ9ULI0 1458 aa23.26■■□□□ 1.31
PTK2-218ENST00000519993 TDRD9Q8NDG6 1382 aaKnown RBP23.26■■□□□ 1.31
PTK2-218ENST00000519993 KNSTRNQ9Y448 316 aa23.26■■□□□ 1.31
PTK2-218ENST00000519993 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
PTK2-218ENST00000519993 RGS3P49796 1198 aa23.22■■□□□ 1.31
PTK2-218ENST00000519993 PKD2Q13563 968 aa23.21■■□□□ 1.31
PTK2-218ENST00000519993 DDRGK1Q96HY6 314 aa23.2■■□□□ 1.31
PTK2-218ENST00000519993 NEUROD2Q15784 382 aa23.19■■□□□ 1.3
PTK2-218ENST00000519993 STAG3Q9UJ98 1225 aa23.18■■□□□ 1.3
PTK2-218ENST00000519993 RTN4Q9NQC3 1192 aaKnown RBP23.17■■□□□ 1.3
PTK2-218ENST00000519993 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
PTK2-218ENST00000519993 DEKP35659 375 aaKnown RBP23.15■■□□□ 1.3
PTK2-218ENST00000519993 ERICH6BQ5W0A0 696 aa23.12■■□□□ 1.29
PTK2-218ENST00000519993 PPM1GO15355 546 aaPredicted RBP23.11■■□□□ 1.29
PTK2-218ENST00000519993 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
PTK2-218ENST00000519993 ANP32BQ92688 251 aaKnown RBP23.08■■□□□ 1.29
PTK2-218ENST00000519993 CDCA8Q53HL2 280 aa23.08■■□□□ 1.28
PTK2-218ENST00000519993 KIF21BO75037 1637 aa23.08■■□□□ 1.28
PTK2-218ENST00000519993 TNNT2P45379 298 aaPredicted RBP23.07■■□□□ 1.28
PTK2-218ENST00000519993 FRAT1Q92837 279 aaPredicted RBP23.06■■□□□ 1.28
PTK2-218ENST00000519993 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
PTK2-218ENST00000519993 BECN1Q14457 450 aa23.05■■□□□ 1.28
PTK2-218ENST00000519993 PRKRIP1Q9H875 184 aaPredicted RBP23.02■■□□□ 1.28
PTK2-218ENST00000519993 TMF1P82094 1093 aa23.02■■□□□ 1.28
PTK2-218ENST00000519993 RCAN3Q9UKA8 241 aa23.02■■□□□ 1.28
PTK2-218ENST00000519993 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
PTK2-218ENST00000519993 IGF1RP08069 1367 aa23■■□□□ 1.27
PTK2-218ENST00000519993 NUP155O75694 1391 aa22.99■■□□□ 1.27
PTK2-218ENST00000519993 PHLDB1Q86UU1 1377 aa22.99■■□□□ 1.27
PTK2-218ENST00000519993 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
PTK2-218ENST00000519993 CFAP53Q96M91 514 aa22.94■■□□□ 1.26
PTK2-218ENST00000519993 ARAP1Q96P48 1450 aa22.93■■□□□ 1.26
PTK2-218ENST00000519993 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
PTK2-218ENST00000519993 FTSJ3Q8IY81 847 aaKnown RBP22.93■■□□□ 1.26
PTK2-218ENST00000519993 CCDC18Q5T9S5 1454 aa22.93■■□□□ 1.26
PTK2-218ENST00000519993 KTN1Q86UP2 1357 aaKnown RBP22.92■■□□□ 1.26
PTK2-218ENST00000519993 RALBP1Q15311 655 aa22.89■■□□□ 1.26
PTK2-218ENST00000519993 ROCK2O75116 1388 aaKnown RBP22.89■■□□□ 1.26
PTK2-218ENST00000519993 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
PTK2-218ENST00000519993 IPO9Q96P70 1041 aaKnown RBP22.87■■□□□ 1.25
PTK2-218ENST00000519993 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
PTK2-218ENST00000519993 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
PTK2-218ENST00000519993 TCERG1O14776 1098 aaKnown RBP22.86■■□□□ 1.25
PTK2-218ENST00000519993 NLRP13Q86W25 1043 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms