RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 METRNQ9UJH8 293 aa17.27■□□□□ 0.35
UBLCP1-202ENST00000519276 C7P10643 843 aa17.26■□□□□ 0.35
UBLCP1-202ENST00000519276 MS4A3Q96HJ5 214 aa17.25■□□□□ 0.35
UBLCP1-202ENST00000519276 ATMINO43313 823 aaPredicted RBP17.23■□□□□ 0.35
UBLCP1-202ENST00000519276 MAMSTRQ6ZN01 415 aa17.2■□□□□ 0.34
UBLCP1-202ENST00000519276 POTEJP0CG39 1038 aa17.14■□□□□ 0.33
UBLCP1-202ENST00000519276 TSPYL2Q9H2G4 693 aaPredicted RBP17.06■□□□□ 0.32
UBLCP1-202ENST00000519276 SCUBE2Q9NQ36 999 aa17.05■□□□□ 0.32
UBLCP1-202ENST00000519276 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
UBLCP1-202ENST00000519276 ATN1P54259 1190 aaPredicted RBP17.02■□□□□ 0.32
UBLCP1-202ENST00000519276 LCE2DQ5TA82 110 aaPredicted RBP17.01■□□□□ 0.31
UBLCP1-202ENST00000519276 KIF12Q96FN5 646 aa16.98■□□□□ 0.31
UBLCP1-202ENST00000519276 FAM163AQ96GL9 167 aaPredicted RBP16.98■□□□□ 0.31
UBLCP1-202ENST00000519276 PROM2Q8N271 834 aa16.97■□□□□ 0.31
UBLCP1-202ENST00000519276 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
UBLCP1-202ENST00000519276 BMP2KQ9NSY1 1161 aaPredicted RBP16.92■□□□□ 0.3
UBLCP1-202ENST00000519276 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
UBLCP1-202ENST00000519276 TIE1P35590 1138 aa16.89■□□□□ 0.29
UBLCP1-202ENST00000519276 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
UBLCP1-202ENST00000519276 TRPC6Q9Y210 931 aa16.83■□□□□ 0.28
UBLCP1-202ENST00000519276 MAP3K13O43283 966 aa16.82■□□□□ 0.28
UBLCP1-202ENST00000519276 SEC24BO95487 1268 aa16.75■□□□□ 0.27
UBLCP1-202ENST00000519276 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
UBLCP1-202ENST00000519276 TTLL13PA6NNM8 815 aa16.73■□□□□ 0.27
UBLCP1-202ENST00000519276 MIER1Q8N108 512 aa16.73■□□□□ 0.27
UBLCP1-202ENST00000519276 COLQQ9Y215 455 aaPredicted RBP16.72■□□□□ 0.27
UBLCP1-202ENST00000519276 CDAN1Q8IWY9 1227 aa16.71■□□□□ 0.27
UBLCP1-202ENST00000519276 IER5LQ5T953 404 aa16.69■□□□□ 0.26
UBLCP1-202ENST00000519276 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
UBLCP1-202ENST00000519276 TRIM35Q9UPQ4 493 aa16.63■□□□□ 0.25
UBLCP1-202ENST00000519276 PCDHB13Q9Y5F0 798 aa16.59■□□□□ 0.25
UBLCP1-202ENST00000519276 PLCD3Q8N3E9 789 aa16.52■□□□□ 0.24
UBLCP1-202ENST00000519276 SLAIN1Q8ND83 568 aa16.52■□□□□ 0.24
UBLCP1-202ENST00000519276 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
UBLCP1-202ENST00000519276 ST18O60284 1047 aa16.48■□□□□ 0.23
UBLCP1-202ENST00000519276 NUBP1P53384 320 aa16.47■□□□□ 0.23
UBLCP1-202ENST00000519276 IFNL1Q8IU54 200 aa16.46■□□□□ 0.23
UBLCP1-202ENST00000519276 PLCG2P16885 1265 aa16.44■□□□□ 0.22
UBLCP1-202ENST00000519276 TMEM106CQ9BVX2 250 aa16.44■□□□□ 0.22
UBLCP1-202ENST00000519276 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
UBLCP1-202ENST00000519276 MMRN1Q13201 1228 aa16.38■□□□□ 0.21
UBLCP1-202ENST00000519276 IRX5P78411 483 aaPredicted RBP16.37■□□□□ 0.21
UBLCP1-202ENST00000519276 TMEM121BQ9BXQ6 578 aaPredicted RBP16.34■□□□□ 0.21
UBLCP1-202ENST00000519276 SPNS2Q8IVW8 549 aa16.32■□□□□ 0.2
UBLCP1-202ENST00000519276 OCEL1Q9H607 264 aa16.3■□□□□ 0.2
UBLCP1-202ENST00000519276 SNPHO15079 494 aa16.29■□□□□ 0.2
UBLCP1-202ENST00000519276 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.23■□□□□ 0.19
UBLCP1-202ENST00000519276 DCAF8Q5TAQ9 597 aa16.15■□□□□ 0.18
UBLCP1-202ENST00000519276 PYGBP11216 843 aa16.13■□□□□ 0.17
UBLCP1-202ENST00000519276 MARVELD3Q96A59 401 aa16.1■□□□□ 0.17
UBLCP1-202ENST00000519276 PCDHB8Q9UN66 801 aa16.08■□□□□ 0.16
UBLCP1-202ENST00000519276 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
UBLCP1-202ENST00000519276 PDCD7Q8N8D1 485 aaKnown RBP16.01■□□□□ 0.15
UBLCP1-202ENST00000519276 L3MBTL3Q96JM7 780 aaPredicted RBP16.01■□□□□ 0.15
UBLCP1-202ENST00000519276 EMP3P54852 163 aa15.99■□□□□ 0.15
UBLCP1-202ENST00000519276 MKRN3Q13064 507 aaKnown RBP15.96■□□□□ 0.15
UBLCP1-202ENST00000519276 ZNF467Q7Z7K2 595 aaPredicted RBP15.96■□□□□ 0.15
UBLCP1-202ENST00000519276 GOLGA2Q08379 1002 aa15.96■□□□□ 0.14
UBLCP1-202ENST00000519276 FKBP8Q14318 412 aa15.93■□□□□ 0.14
UBLCP1-202ENST00000519276 GSE1Q14687 1217 aa15.9■□□□□ 0.14
UBLCP1-202ENST00000519276 HS3ST6Q96QI5 342 aa15.89■□□□□ 0.13
UBLCP1-202ENST00000519276 FBXO3Q9UK99 471 aa15.89■□□□□ 0.13
UBLCP1-202ENST00000519276 KRTAP3-3Q9BYR6 98 aa15.88■□□□□ 0.13
UBLCP1-202ENST00000519276 KRTAP3-2Q9BYR7 98 aa15.88■□□□□ 0.13
UBLCP1-202ENST00000519276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBLCP1-202ENST00000519276 POTEB3A0JP26 581 aa15.85■□□□□ 0.13
UBLCP1-202ENST00000519276 FAM205CA6NFA0 338 aa15.85■□□□□ 0.13
UBLCP1-202ENST00000519276 CHRM1P11229 460 aaPredicted RBP15.85■□□□□ 0.13
UBLCP1-202ENST00000519276 POTEBQ6S5H4 581 aa15.85■□□□□ 0.13
UBLCP1-202ENST00000519276 PSEN1P49768 467 aa15.8■□□□□ 0.12
UBLCP1-202ENST00000519276 ILDR1Q86SU0 546 aaPredicted RBP15.79■□□□□ 0.12
UBLCP1-202ENST00000519276 KLHL34Q8N239 644 aa15.76■□□□□ 0.11
UBLCP1-202ENST00000519276 PDAP1Q13442 181 aaKnown RBP15.69■□□□□ 0.1
UBLCP1-202ENST00000519276 G3V3G9 751 aa15.68■□□□□ 0.1
UBLCP1-202ENST00000519276 HOXB3P14651 431 aaPredicted RBP15.67■□□□□ 0.1
UBLCP1-202ENST00000519276 VASPP50552 380 aaPredicted RBP15.66■□□□□ 0.1
UBLCP1-202ENST00000519276 DPY19L2Q6NUT2 758 aa15.66■□□□□ 0.1
UBLCP1-202ENST00000519276 BOLA1Q9Y3E2 137 aa15.66■□□□□ 0.1
UBLCP1-202ENST00000519276 HOXB1P14653 301 aaPredicted RBP15.64■□□□□ 0.09
UBLCP1-202ENST00000519276 ZNF710Q8N1W2 664 aa15.62■□□□□ 0.09
UBLCP1-202ENST00000519276 DOK7Q18PE1 504 aa15.59■□□□□ 0.09
UBLCP1-202ENST00000519276 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
UBLCP1-202ENST00000519276 ERBB3P21860 1342 aa15.57■□□□□ 0.08
UBLCP1-202ENST00000519276 RNF166Q96A37 237 aaPredicted RBP15.52■□□□□ 0.07
UBLCP1-202ENST00000519276 RIMBP2O15034 1052 aa15.5■□□□□ 0.07
UBLCP1-202ENST00000519276 VARS2Q5ST30 1063 aaKnown RBP15.43■□□□□ 0.06
UBLCP1-202ENST00000519276 SPOCK2Q92563 424 aa15.43■□□□□ 0.06
UBLCP1-202ENST00000519276 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
UBLCP1-202ENST00000519276 ZSWIM6Q9HCJ5 1215 aa15.42■□□□□ 0.06
UBLCP1-202ENST00000519276 MYT1LQ9UL68 1186 aa15.42■□□□□ 0.06
UBLCP1-202ENST00000519276 ZNF687Q8N1G0 1237 aa15.38■□□□□ 0.05
UBLCP1-202ENST00000519276 PTGER2P43116 358 aa15.35■□□□□ 0.05
UBLCP1-202ENST00000519276 EFCAB3Q8N7B9 438 aa15.33■□□□□ 0.05
UBLCP1-202ENST00000519276 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
UBLCP1-202ENST00000519276 MICALL2Q8IY33 904 aa15.3■□□□□ 0.04
UBLCP1-202ENST00000519276 GPR153Q6NV75 609 aa15.29■□□□□ 0.04
UBLCP1-202ENST00000519276 TMEM92Q6UXU6 159 aa15.28■□□□□ 0.04
UBLCP1-202ENST00000519276 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
UBLCP1-202ENST00000519276 SOX12O15370 315 aa15.21■□□□□ 0.03
UBLCP1-202ENST00000519276 ANKRD13DQ6ZTN6 518 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms