RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ASTLQ6HA08 431 aaPredicted RBP10.84□□□□□ -0.67
PCM1-208ENST00000518877 POTEB2H3BUK9 544 aa10.83□□□□□ -0.68
PCM1-208ENST00000518877 ATMINO43313 823 aaPredicted RBP10.83□□□□□ -0.68
PCM1-208ENST00000518877 SLC39A7Q92504 469 aa10.82□□□□□ -0.68
PCM1-208ENST00000518877 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
PCM1-208ENST00000518877 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
PCM1-208ENST00000518877 KIF12Q96FN5 646 aa10.81□□□□□ -0.68
PCM1-208ENST00000518877 FKBP8Q14318 412 aa10.8□□□□□ -0.68
PCM1-208ENST00000518877 RASEFQ8IZ41 740 aa10.8□□□□□ -0.68
PCM1-208ENST00000518877 C7P10643 843 aa10.78□□□□□ -0.68
PCM1-208ENST00000518877 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
PCM1-208ENST00000518877 MAP3K13O43283 966 aa10.76□□□□□ -0.69
PCM1-208ENST00000518877 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
PCM1-208ENST00000518877 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
PCM1-208ENST00000518877 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
PCM1-208ENST00000518877 TIE1P35590 1138 aa10.69□□□□□ -0.7
PCM1-208ENST00000518877 NUBP1P53384 320 aa10.67□□□□□ -0.7
PCM1-208ENST00000518877 MAMSTRQ6ZN01 415 aa10.67□□□□□ -0.7
PCM1-208ENST00000518877 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
PCM1-208ENST00000518877 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
PCM1-208ENST00000518877 POTEJP0CG39 1038 aa10.64□□□□□ -0.71
PCM1-208ENST00000518877 SCUBE2Q9NQ36 999 aa10.64□□□□□ -0.71
PCM1-208ENST00000518877 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
PCM1-208ENST00000518877 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
PCM1-208ENST00000518877 SGIP1Q9BQI5 828 aa10.63□□□□□ -0.71
PCM1-208ENST00000518877 SEC24BO95487 1268 aa10.62□□□□□ -0.71
PCM1-208ENST00000518877 POTEMA6NI47 508 aa10.6□□□□□ -0.71
PCM1-208ENST00000518877 FBXO3Q9UK99 471 aa10.6□□□□□ -0.71
PCM1-208ENST00000518877 POTEFA5A3E0 1075 aa10.59□□□□□ -0.71
PCM1-208ENST00000518877 TRIM35Q9UPQ4 493 aa10.59□□□□□ -0.71
PCM1-208ENST00000518877 DCAF8Q5TAQ9 597 aa10.57□□□□□ -0.72
PCM1-208ENST00000518877 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
PCM1-208ENST00000518877 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
PCM1-208ENST00000518877 COLQQ9Y215 455 aaPredicted RBP10.55□□□□□ -0.72
PCM1-208ENST00000518877 IER5LQ5T953 404 aa10.53□□□□□ -0.72
PCM1-208ENST00000518877 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
PCM1-208ENST00000518877 FAM163AQ96GL9 167 aaPredicted RBP10.52□□□□□ -0.73
PCM1-208ENST00000518877 PYGBP11216 843 aa10.51□□□□□ -0.73
PCM1-208ENST00000518877 KLHL34Q8N239 644 aa10.51□□□□□ -0.73
PCM1-208ENST00000518877 PLCG2P16885 1265 aa10.47□□□□□ -0.73
PCM1-208ENST00000518877 VASPP50552 380 aaPredicted RBP10.45□□□□□ -0.74
PCM1-208ENST00000518877 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
PCM1-208ENST00000518877 GSE1Q14687 1217 aa10.41□□□□□ -0.74
PCM1-208ENST00000518877 LCE2DQ5TA82 110 aaPredicted RBP10.41□□□□□ -0.74
PCM1-208ENST00000518877 PCDH10Q9P2E7 1040 aa10.41□□□□□ -0.74
PCM1-208ENST00000518877 SLAIN1Q8ND83 568 aa10.39□□□□□ -0.75
PCM1-208ENST00000518877 IRX5P78411 483 aaPredicted RBP10.38□□□□□ -0.75
PCM1-208ENST00000518877 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
PCM1-208ENST00000518877 ZNF467Q7Z7K2 595 aaPredicted RBP10.35□□□□□ -0.75
PCM1-208ENST00000518877 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
PCM1-208ENST00000518877 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
PCM1-208ENST00000518877 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
PCM1-208ENST00000518877 CIZ1Q9ULV3 898 aaPredicted RBP10.28□□□□□ -0.76
PCM1-208ENST00000518877 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
PCM1-208ENST00000518877 ST18O60284 1047 aa10.26□□□□□ -0.77
PCM1-208ENST00000518877 PSEN1P49768 467 aa10.26□□□□□ -0.77
PCM1-208ENST00000518877 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
PCM1-208ENST00000518877 IFNLR1Q8IU57 520 aaPredicted RBP10.24□□□□□ -0.77
PCM1-208ENST00000518877 CDAN1Q8IWY9 1227 aa10.23□□□□□ -0.77
PCM1-208ENST00000518877 C3orf67Q6ZVT6 689 aa10.22□□□□□ -0.77
PCM1-208ENST00000518877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.22□□□□□ -0.771e-17■■■■■ 30
PCM1-208ENST00000518877 SNPHO15079 494 aa10.21□□□□□ -0.77
PCM1-208ENST00000518877 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.77
PCM1-208ENST00000518877 PDAP1Q13442 181 aaKnown RBP10.2□□□□□ -0.78
PCM1-208ENST00000518877 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
PCM1-208ENST00000518877 CABP2Q9NPB3 220 aa10.16□□□□□ -0.78
PCM1-208ENST00000518877 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
PCM1-208ENST00000518877 G3V3G9 751 aa10.13□□□□□ -0.79
PCM1-208ENST00000518877 MARVELD3Q96A59 401 aa10.11□□□□□ -0.79
PCM1-208ENST00000518877 DPY19L2Q6NUT2 758 aa10.08□□□□□ -0.8
PCM1-208ENST00000518877 TRIM41Q8WV44 630 aa10.07□□□□□ -0.8
PCM1-208ENST00000518877 ILDR1Q86SU0 546 aaPredicted RBP10.05□□□□□ -0.8
PCM1-208ENST00000518877 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
PCM1-208ENST00000518877 EMP3P54852 163 aa10.04□□□□□ -0.8
PCM1-208ENST00000518877 EFCAB3Q8N7B9 438 aa10□□□□□ -0.81
PCM1-208ENST00000518877 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
PCM1-208ENST00000518877 SPNS2Q8IVW8 549 aa9.96□□□□□ -0.82
PCM1-208ENST00000518877 RIOK3O14730 519 aaKnown RBP9.95□□□□□ -0.82
PCM1-208ENST00000518877 MMRN1Q13201 1228 aa9.95□□□□□ -0.82
PCM1-208ENST00000518877 ZNF710Q8N1W2 664 aa9.95□□□□□ -0.82
PCM1-208ENST00000518877 HS3ST6Q96QI5 342 aa9.95□□□□□ -0.82
PCM1-208ENST00000518877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
PCM1-208ENST00000518877 DOK7Q18PE1 504 aa9.91□□□□□ -0.82
PCM1-208ENST00000518877 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
PCM1-208ENST00000518877 VGFO15240 615 aaPredicted RBP9.9□□□□□ -0.82
PCM1-208ENST00000518877 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
PCM1-208ENST00000518877 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.82
PCM1-208ENST00000518877 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
PCM1-208ENST00000518877 SOX12O15370 315 aa9.89□□□□□ -0.83
PCM1-208ENST00000518877 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
PCM1-208ENST00000518877 RIMBP2O15034 1052 aa9.88□□□□□ -0.83
PCM1-208ENST00000518877 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
PCM1-208ENST00000518877 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
PCM1-208ENST00000518877 PHF8Q9UPP1 1060 aa9.86□□□□□ -0.83
PCM1-208ENST00000518877 ERBB3P21860 1342 aa9.85□□□□□ -0.83
PCM1-208ENST00000518877 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
PCM1-208ENST00000518877 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
PCM1-208ENST00000518877 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
PCM1-208ENST00000518877 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
PCM1-208ENST00000518877 TMEM92Q6UXU6 159 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms