RNA–Protein interactions for RNA: ENST00000518338.6

TBCA-206, Transcript of tubulin folding cofactor A, humanhuman

TSL 2 BASIC

Gene TBCA, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCA-206ENST00000518338 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
TBCA-206ENST00000518338 SLC39A7Q92504 469 aa13□□□□□ -0.33
TBCA-206ENST00000518338 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
TBCA-206ENST00000518338 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.33
TBCA-206ENST00000518338 LCE2DQ5TA82 110 aaPredicted RBP12.96□□□□□ -0.33
TBCA-206ENST00000518338 MS4A3Q96HJ5 214 aa12.95□□□□□ -0.34
TBCA-206ENST00000518338 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
TBCA-206ENST00000518338 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
TBCA-206ENST00000518338 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
TBCA-206ENST00000518338 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
TBCA-206ENST00000518338 ATN1P54259 1190 aaPredicted RBP12.8□□□□□ -0.36
TBCA-206ENST00000518338 FKBP8Q14318 412 aa12.75□□□□□ -0.37
TBCA-206ENST00000518338 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
TBCA-206ENST00000518338 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
TBCA-206ENST00000518338 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
TBCA-206ENST00000518338 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
TBCA-206ENST00000518338 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
TBCA-206ENST00000518338 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
TBCA-206ENST00000518338 TIE1P35590 1138 aa12.61□□□□□ -0.39
TBCA-206ENST00000518338 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
TBCA-206ENST00000518338 SEC24BO95487 1268 aa12.58□□□□□ -0.4
TBCA-206ENST00000518338 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
TBCA-206ENST00000518338 MAP3K13O43283 966 aa12.55□□□□□ -0.4
TBCA-206ENST00000518338 PROM2Q8N271 834 aa12.55□□□□□ -0.4
TBCA-206ENST00000518338 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
TBCA-206ENST00000518338 ST18O60284 1047 aa12.49□□□□□ -0.41
TBCA-206ENST00000518338 IER5LQ5T953 404 aa12.48□□□□□ -0.41
TBCA-206ENST00000518338 SLAIN1Q8ND83 568 aa12.47□□□□□ -0.41
TBCA-206ENST00000518338 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
TBCA-206ENST00000518338 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
TBCA-206ENST00000518338 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
TBCA-206ENST00000518338 SPNS2Q8IVW8 549 aa12.4□□□□□ -0.42
TBCA-206ENST00000518338 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
TBCA-206ENST00000518338 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
TBCA-206ENST00000518338 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
TBCA-206ENST00000518338 PCDHB13Q9Y5F0 798 aa12.34□□□□□ -0.43
TBCA-206ENST00000518338 PLCG2P16885 1265 aa12.31□□□□□ -0.44
TBCA-206ENST00000518338 MIER1Q8N108 512 aa12.31□□□□□ -0.44
TBCA-206ENST00000518338 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
TBCA-206ENST00000518338 TMEM106CQ9BVX2 250 aa12.26□□□□□ -0.45
TBCA-206ENST00000518338 SNPHO15079 494 aa12.24□□□□□ -0.45
TBCA-206ENST00000518338 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
TBCA-206ENST00000518338 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
TBCA-206ENST00000518338 MARVELD3Q96A59 401 aa12.22□□□□□ -0.45
TBCA-206ENST00000518338 OCEL1Q9H607 264 aa12.16□□□□□ -0.46
TBCA-206ENST00000518338 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
TBCA-206ENST00000518338 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.46
TBCA-206ENST00000518338 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
TBCA-206ENST00000518338 NUBP1P53384 320 aa12.13□□□□□ -0.47
TBCA-206ENST00000518338 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
TBCA-206ENST00000518338 EMP3P54852 163 aa12.09□□□□□ -0.47
TBCA-206ENST00000518338 FAM212AQ96EL1 285 aa12.09□□□□□ -0.47
TBCA-206ENST00000518338 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
TBCA-206ENST00000518338 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
TBCA-206ENST00000518338 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
TBCA-206ENST00000518338 POTEB3A0JP26 581 aa12□□□□□ -0.49
TBCA-206ENST00000518338 POTEBQ6S5H4 581 aa12□□□□□ -0.49
TBCA-206ENST00000518338 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
TBCA-206ENST00000518338 FAM205CA6NFA0 338 aa11.98□□□□□ -0.49
TBCA-206ENST00000518338 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
TBCA-206ENST00000518338 IFNLR1Q8IU57 520 aaPredicted RBP11.97□□□□□ -0.49
TBCA-206ENST00000518338 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
TBCA-206ENST00000518338 PYGBP11216 843 aa11.92□□□□□ -0.5
TBCA-206ENST00000518338 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
TBCA-206ENST00000518338 PCDHB8Q9UN66 801 aa11.92□□□□□ -0.5
TBCA-206ENST00000518338 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
TBCA-206ENST00000518338 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
TBCA-206ENST00000518338 MKRN3Q13064 507 aaKnown RBP11.84□□□□□ -0.51
TBCA-206ENST00000518338 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
TBCA-206ENST00000518338 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
TBCA-206ENST00000518338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.524e-10■■□□□ 14.2
TBCA-206ENST00000518338 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
TBCA-206ENST00000518338 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
TBCA-206ENST00000518338 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
TBCA-206ENST00000518338 ERBB3P21860 1342 aa11.7□□□□□ -0.54
TBCA-206ENST00000518338 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
TBCA-206ENST00000518338 ZNF710Q8N1W2 664 aa11.7□□□□□ -0.54
TBCA-206ENST00000518338 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
TBCA-206ENST00000518338 GSE1Q14687 1217 aa11.69□□□□□ -0.54
TBCA-206ENST00000518338 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
TBCA-206ENST00000518338 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
TBCA-206ENST00000518338 PSEN1P49768 467 aa11.66□□□□□ -0.54
TBCA-206ENST00000518338 G3V3G9 751 aa11.65□□□□□ -0.54
TBCA-206ENST00000518338 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
TBCA-206ENST00000518338 BOLA1Q9Y3E2 137 aa11.64□□□□□ -0.55
TBCA-206ENST00000518338 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
TBCA-206ENST00000518338 CHRM1P11229 460 aaPredicted RBP11.6□□□□□ -0.55
TBCA-206ENST00000518338 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
TBCA-206ENST00000518338 PDAP1Q13442 181 aaKnown RBP11.56□□□□□ -0.56
TBCA-206ENST00000518338 PTGER2P43116 358 aa11.55□□□□□ -0.56
TBCA-206ENST00000518338 PKD2Q13563 968 aa11.54□□□□□ -0.56
TBCA-206ENST00000518338 ZNF687Q8N1G0 1237 aa11.54□□□□□ -0.56
TBCA-206ENST00000518338 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
TBCA-206ENST00000518338 CABP2Q9NPB3 220 aa11.53□□□□□ -0.56
TBCA-206ENST00000518338 ECM2O94769 699 aaPredicted RBP11.49□□□□□ -0.57
TBCA-206ENST00000518338 ZSWIM6Q9HCJ5 1215 aa11.49□□□□□ -0.57
TBCA-206ENST00000518338 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
TBCA-206ENST00000518338 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
TBCA-206ENST00000518338 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
TBCA-206ENST00000518338 ANKRD13DQ6ZTN6 518 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms