RNA–Protein interactions for RNA: ENST00000517012.1

RNU6-388P-201, Transcript of RNA, U6 small nuclear 388, pseudogene, humanhuman

BASIC

Gene RNU6-388P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-388P-201ENST00000517012 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
RNU6-388P-201ENST00000517012 MNX1P50219 401 aaPredicted RBP10.41□□□□□ -0.74
RNU6-388P-201ENST00000517012 ATMINO43313 823 aaPredicted RBP10.38□□□□□ -0.75
RNU6-388P-201ENST00000517012 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
RNU6-388P-201ENST00000517012 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
RNU6-388P-201ENST00000517012 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
RNU6-388P-201ENST00000517012 SCUBE2Q9NQ36 999 aa10.31□□□□□ -0.76
RNU6-388P-201ENST00000517012 FAM163AQ96GL9 167 aaPredicted RBP10.25□□□□□ -0.77
RNU6-388P-201ENST00000517012 ATN1P54259 1190 aaPredicted RBP10.24□□□□□ -0.77
RNU6-388P-201ENST00000517012 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
RNU6-388P-201ENST00000517012 TSPYL2Q9H2G4 693 aaPredicted RBP10.24□□□□□ -0.77
RNU6-388P-201ENST00000517012 CCDC61Q9Y6R9 512 aa10.23□□□□□ -0.77
RNU6-388P-201ENST00000517012 KIF12Q96FN5 646 aa10.2□□□□□ -0.78
RNU6-388P-201ENST00000517012 TIE1P35590 1138 aa10.17□□□□□ -0.78
RNU6-388P-201ENST00000517012 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
RNU6-388P-201ENST00000517012 POTEFA5A3E0 1075 aa10.15□□□□□ -0.78
RNU6-388P-201ENST00000517012 PROM2Q8N271 834 aa10.13□□□□□ -0.79
RNU6-388P-201ENST00000517012 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
RNU6-388P-201ENST00000517012 MAP3K13O43283 966 aa10.1□□□□□ -0.79
RNU6-388P-201ENST00000517012 SEC24BO95487 1268 aa10.1□□□□□ -0.79
RNU6-388P-201ENST00000517012 TRPC6Q9Y210 931 aa10.09□□□□□ -0.79
RNU6-388P-201ENST00000517012 IER5LQ5T953 404 aa10.07□□□□□ -0.8
RNU6-388P-201ENST00000517012 TTLL13PA6NNM8 815 aa10.06□□□□□ -0.8
RNU6-388P-201ENST00000517012 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
RNU6-388P-201ENST00000517012 COLQQ9Y215 455 aaPredicted RBP10.05□□□□□ -0.8
RNU6-388P-201ENST00000517012 SGIP1Q9BQI5 828 aa10.04□□□□□ -0.8
RNU6-388P-201ENST00000517012 RASEFQ8IZ41 740 aa10.02□□□□□ -0.81
RNU6-388P-201ENST00000517012 MIER1Q8N108 512 aa10.01□□□□□ -0.81
RNU6-388P-201ENST00000517012 TRIM35Q9UPQ4 493 aa10□□□□□ -0.81
RNU6-388P-201ENST00000517012 EHMT2Q96KQ7 1210 aa9.99□□□□□ -0.81
RNU6-388P-201ENST00000517012 SLAIN1Q8ND83 568 aa9.97□□□□□ -0.81
RNU6-388P-201ENST00000517012 PCDHB13Q9Y5F0 798 aa9.96□□□□□ -0.82
RNU6-388P-201ENST00000517012 ST18O60284 1047 aa9.95□□□□□ -0.82
RNU6-388P-201ENST00000517012 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
RNU6-388P-201ENST00000517012 PLCG2P16885 1265 aa9.9□□□□□ -0.82
RNU6-388P-201ENST00000517012 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
RNU6-388P-201ENST00000517012 TMEM121BQ9BXQ6 578 aaPredicted RBP9.89□□□□□ -0.83
RNU6-388P-201ENST00000517012 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
RNU6-388P-201ENST00000517012 TMEM106CQ9BVX2 250 aa9.87□□□□□ -0.83
RNU6-388P-201ENST00000517012 SNPHO15079 494 aa9.85□□□□□ -0.83
RNU6-388P-201ENST00000517012 NUBP1P53384 320 aa9.84□□□□□ -0.83
RNU6-388P-201ENST00000517012 IRX5P78411 483 aaPredicted RBP9.84□□□□□ -0.83
RNU6-388P-201ENST00000517012 MMRN1Q13201 1228 aa9.84□□□□□ -0.83
RNU6-388P-201ENST00000517012 FAM212AQ96EL1 285 aa9.84□□□□□ -0.83
RNU6-388P-201ENST00000517012 SPNS2Q8IVW8 549 aa9.83□□□□□ -0.84
RNU6-388P-201ENST00000517012 OCEL1Q9H607 264 aa9.81□□□□□ -0.84
RNU6-388P-201ENST00000517012 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.79□□□□□ -0.84
RNU6-388P-201ENST00000517012 MARVELD3Q96A59 401 aa9.71□□□□□ -0.86
RNU6-388P-201ENST00000517012 EMP3P54852 163 aa9.66□□□□□ -0.86
RNU6-388P-201ENST00000517012 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
RNU6-388P-201ENST00000517012 C3orf67Q6ZVT6 689 aa9.66□□□□□ -0.86
RNU6-388P-201ENST00000517012 PYGBP11216 843 aa9.65□□□□□ -0.86
RNU6-388P-201ENST00000517012 L3MBTL3Q96JM7 780 aaPredicted RBP9.64□□□□□ -0.87
RNU6-388P-201ENST00000517012 PCDHB8Q9UN66 801 aa9.62□□□□□ -0.87
RNU6-388P-201ENST00000517012 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
RNU6-388P-201ENST00000517012 GOLGA2Q08379 1002 aa9.6□□□□□ -0.87
RNU6-388P-201ENST00000517012 MKRN3Q13064 507 aaKnown RBP9.59□□□□□ -0.87
RNU6-388P-201ENST00000517012 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
RNU6-388P-201ENST00000517012 ZNF467Q7Z7K2 595 aaPredicted RBP9.58□□□□□ -0.88
RNU6-388P-201ENST00000517012 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
RNU6-388P-201ENST00000517012 KRTAP3-2Q9BYR7 98 aa9.58□□□□□ -0.88
RNU6-388P-201ENST00000517012 FAM205CA6NFA0 338 aa9.56□□□□□ -0.88
RNU6-388P-201ENST00000517012 POTEB3A0JP26 581 aa9.53□□□□□ -0.88
RNU6-388P-201ENST00000517012 POTEBQ6S5H4 581 aa9.53□□□□□ -0.88
RNU6-388P-201ENST00000517012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.88
RNU6-388P-201ENST00000517012 GSE1Q14687 1217 aa9.52□□□□□ -0.89
RNU6-388P-201ENST00000517012 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
RNU6-388P-201ENST00000517012 CHRM1P11229 460 aaPredicted RBP9.48□□□□□ -0.89
RNU6-388P-201ENST00000517012 ILDR1Q86SU0 546 aaPredicted RBP9.48□□□□□ -0.89
RNU6-388P-201ENST00000517012 PSEN1P49768 467 aa9.47□□□□□ -0.89
RNU6-388P-201ENST00000517012 G3V3G9 751 aa9.45□□□□□ -0.9
RNU6-388P-201ENST00000517012 FKBP8Q14318 412 aa9.45□□□□□ -0.9
RNU6-388P-201ENST00000517012 HOXB3P14651 431 aaPredicted RBP9.42□□□□□ -0.9
RNU6-388P-201ENST00000517012 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
RNU6-388P-201ENST00000517012 ZNF710Q8N1W2 664 aa9.42□□□□□ -0.9
RNU6-388P-201ENST00000517012 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.9
RNU6-388P-201ENST00000517012 DOK7Q18PE1 504 aa9.4□□□□□ -0.9
RNU6-388P-201ENST00000517012 KLHL34Q8N239 644 aa9.4□□□□□ -0.9
RNU6-388P-201ENST00000517012 BOLA1Q9Y3E2 137 aa9.4□□□□□ -0.9
RNU6-388P-201ENST00000517012 RNF166Q96A37 237 aaPredicted RBP9.39□□□□□ -0.91
RNU6-388P-201ENST00000517012 ERBB3P21860 1342 aa9.38□□□□□ -0.91
RNU6-388P-201ENST00000517012 DPY19L2Q6NUT2 758 aa9.38□□□□□ -0.91
RNU6-388P-201ENST00000517012 RIMBP2O15034 1052 aa9.36□□□□□ -0.91
RNU6-388P-201ENST00000517012 CABP2Q9NPB3 220 aa9.34□□□□□ -0.91
RNU6-388P-201ENST00000517012 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
RNU6-388P-201ENST00000517012 MYT1LQ9UL68 1186 aa9.32□□□□□ -0.92
RNU6-388P-201ENST00000517012 PTGER2P43116 358 aa9.29□□□□□ -0.92
RNU6-388P-201ENST00000517012 VARS2Q5ST30 1063 aaKnown RBP9.29□□□□□ -0.92
RNU6-388P-201ENST00000517012 ZSWIM6Q9HCJ5 1215 aa9.29□□□□□ -0.92
RNU6-388P-201ENST00000517012 ZNF687Q8N1G0 1237 aa9.27□□□□□ -0.93
RNU6-388P-201ENST00000517012 CIZ1Q9ULV3 898 aaPredicted RBP9.2□□□□□ -0.94
RNU6-388P-201ENST00000517012 GPR153Q6NV75 609 aa9.19□□□□□ -0.94
RNU6-388P-201ENST00000517012 SPOCK2Q92563 424 aa9.19□□□□□ -0.94
RNU6-388P-201ENST00000517012 MICALL2Q8IY33 904 aa9.17□□□□□ -0.94
RNU6-388P-201ENST00000517012 EFCAB3Q8N7B9 438 aa9.17□□□□□ -0.94
RNU6-388P-201ENST00000517012 TMEM92Q6UXU6 159 aa9.15□□□□□ -0.94
RNU6-388P-201ENST00000517012 TRIM41Q8WV44 630 aa9.14□□□□□ -0.95
RNU6-388P-201ENST00000517012 ANKRD13DQ6ZTN6 518 aa9.13□□□□□ -0.95
RNU6-388P-201ENST00000517012 SOX12O15370 315 aa9.11□□□□□ -0.95
RNU6-388P-201ENST00000517012 ZNF316A6NFI3 1004 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms