RNA–Protein interactions for RNA: ENST00000516998.1

RNU6-1006P-201, Transcript of RNA, U6 small nuclear 1006, pseudogene, humanhuman

BASIC

Gene RNU6-1006P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1006P-201ENST00000516998 PABPN1Q86U42 306 aaKnown RBP eCLIP5.63□□□□□ -1.51
RNU6-1006P-201ENST00000516998 MKRN4PQ13434 485 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1006P-201ENST00000516998 MS4A3Q96HJ5 214 aa5.6□□□□□ -1.51
RNU6-1006P-201ENST00000516998 ATN1P54259 1190 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1006P-201ENST00000516998 MARVELD3Q96A59 401 aa5.54□□□□□ -1.52
RNU6-1006P-201ENST00000516998 CREBZFQ9NS37 354 aa5.53□□□□□ -1.52
RNU6-1006P-201ENST00000516998 PAK3O75914 559 aaPredicted RBP5.51□□□□□ -1.53
RNU6-1006P-201ENST00000516998 SLAIN1Q8ND83 568 aa5.51□□□□□ -1.53
RNU6-1006P-201ENST00000516998 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
RNU6-1006P-201ENST00000516998 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
RNU6-1006P-201ENST00000516998 COLQQ9Y215 455 aaPredicted RBP5.51□□□□□ -1.53
RNU6-1006P-201ENST00000516998 TRPC6Q9Y210 931 aa5.45□□□□□ -1.54
RNU6-1006P-201ENST00000516998 POTEB3A0JP26 581 aa5.44□□□□□ -1.54
RNU6-1006P-201ENST00000516998 POTEBQ6S5H4 581 aa5.44□□□□□ -1.54
RNU6-1006P-201ENST00000516998 TMEM121BQ9BXQ6 578 aaPredicted RBP5.44□□□□□ -1.54
RNU6-1006P-201ENST00000516998 BMP2KQ9NSY1 1161 aaPredicted RBP5.44□□□□□ -1.54
RNU6-1006P-201ENST00000516998 FOXD4L1Q9NU39 408 aa5.44□□□□□ -1.54
RNU6-1006P-201ENST00000516998 SEC24BO95487 1268 aa5.42□□□□□ -1.54
RNU6-1006P-201ENST00000516998 EMP3P54852 163 aa5.37□□□□□ -1.55
RNU6-1006P-201ENST00000516998 RNF166Q96A37 237 aaPredicted RBP5.37□□□□□ -1.55
RNU6-1006P-201ENST00000516998 HS3ST6Q96QI5 342 aa5.37□□□□□ -1.55
RNU6-1006P-201ENST00000516998 FAM205CA6NFA0 338 aa5.35□□□□□ -1.55
RNU6-1006P-201ENST00000516998 MNX1P50219 401 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1006P-201ENST00000516998 TTLL13PA6NNM8 815 aa5.31□□□□□ -1.56
RNU6-1006P-201ENST00000516998 NPM1P06748 294 aaKnown RBP eCLIP5.3□□□□□ -1.56
RNU6-1006P-201ENST00000516998 TIE1P35590 1138 aa5.3□□□□□ -1.56
RNU6-1006P-201ENST00000516998 TSPYL2Q9H2G4 693 aaPredicted RBP5.3□□□□□ -1.56
RNU6-1006P-201ENST00000516998 KIF12Q96FN5 646 aa5.29□□□□□ -1.56
RNU6-1006P-201ENST00000516998 SNPHO15079 494 aa5.28□□□□□ -1.56
RNU6-1006P-201ENST00000516998 TRIM35Q9UPQ4 493 aa5.28□□□□□ -1.56
RNU6-1006P-201ENST00000516998 CCDC61Q9Y6R9 512 aa5.28□□□□□ -1.56
RNU6-1006P-201ENST00000516998 ATXN8OSP0DMR3 200 aa5.26□□□□□ -1.57
RNU6-1006P-201ENST00000516998 MYT1LQ9UL68 1186 aa5.26□□□□□ -1.57
RNU6-1006P-201ENST00000516998 MAP3K13O43283 966 aa5.25□□□□□ -1.57
RNU6-1006P-201ENST00000516998 IER5LQ5T953 404 aa5.24□□□□□ -1.57
RNU6-1006P-201ENST00000516998 ZBTB22O15209 634 aa5.22□□□□□ -1.57
RNU6-1006P-201ENST00000516998 SLC4A1APQ9BWU0 796 aaKnown RBP5.22□□□□□ -1.57
RNU6-1006P-201ENST00000516998 PLCG2P16885 1265 aa5.2□□□□□ -1.58
RNU6-1006P-201ENST00000516998 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.19□□□□□ -1.58
RNU6-1006P-201ENST00000516998 STAG3Q9UJ98 1225 aa5.18□□□□□ -1.58
RNU6-1006P-201ENST00000516998 IRX5P78411 483 aaPredicted RBP5.16□□□□□ -1.58
RNU6-1006P-201ENST00000516998 PLA2G2EQ9NZK7 142 aa5.16□□□□□ -1.58
RNU6-1006P-201ENST00000516998 ERBB3P21860 1342 aa5.09□□□□□ -1.59
RNU6-1006P-201ENST00000516998 TMEM106CQ9BVX2 250 aa5.09□□□□□ -1.59
RNU6-1006P-201ENST00000516998 OCEL1Q9H607 264 aa5.07□□□□□ -1.6
RNU6-1006P-201ENST00000516998 VARS2Q5ST30 1063 aaKnown RBP5.06□□□□□ -1.6
RNU6-1006P-201ENST00000516998 PCDHB13Q9Y5F0 798 aa5.06□□□□□ -1.6
RNU6-1006P-201ENST00000516998 C3orf67Q6ZVT6 689 aa5.05□□□□□ -1.6
RNU6-1006P-201ENST00000516998 HOXB3P14651 431 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1006P-201ENST00000516998 IFNL1Q8IU54 200 aa5.04□□□□□ -1.6
RNU6-1006P-201ENST00000516998 RASEFQ8IZ41 740 aa5.04□□□□□ -1.6
RNU6-1006P-201ENST00000516998 IRX2Q9BZI1 471 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1006P-201ENST00000516998 HOXB1P14653 301 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1006P-201ENST00000516998 PTGER2P43116 358 aa5.01□□□□□ -1.61
RNU6-1006P-201ENST00000516998 ANKRD13DQ6ZTN6 518 aa5.01□□□□□ -1.61
RNU6-1006P-201ENST00000516998 PDCD7Q8N8D1 485 aaKnown RBP4.98□□□□□ -1.61
RNU6-1006P-201ENST00000516998 ZNF687Q8N1G0 1237 aa4.97□□□□□ -1.61
RNU6-1006P-201ENST00000516998 SGIP1Q9BQI5 828 aa4.97□□□□□ -1.61
RNU6-1006P-201ENST00000516998 ZNF710Q8N1W2 664 aa4.96□□□□□ -1.62
RNU6-1006P-201ENST00000516998 HCSTQ9UBK5 93 aa4.93□□□□□ -1.62
RNU6-1006P-201ENST00000516998 Q6ZNB5 142 aa4.92□□□□□ -1.62
RNU6-1006P-201ENST00000516998 LSM11P83369 360 aaKnown RBP eCLIP4.9□□□□□ -1.63
RNU6-1006P-201ENST00000516998 L3MBTL3Q96JM7 780 aaPredicted RBP4.9□□□□□ -1.63
RNU6-1006P-201ENST00000516998 SPDYE4A6NLX3 237 aa4.89□□□□□ -1.63
RNU6-1006P-201ENST00000516998 LCE2BO14633 110 aa4.88□□□□□ -1.63
RNU6-1006P-201ENST00000516998 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
RNU6-1006P-201ENST00000516998 DOK7Q18PE1 504 aa4.87□□□□□ -1.63
RNU6-1006P-201ENST00000516998 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
RNU6-1006P-201ENST00000516998 DPY19L2Q6NUT2 758 aa4.84□□□□□ -1.63
RNU6-1006P-201ENST00000516998 RGS20O76081 388 aa4.83□□□□□ -1.64
RNU6-1006P-201ENST00000516998 POTEEQ6S8J3 1075 aa4.82□□□□□ -1.64
RNU6-1006P-201ENST00000516998 RIMBP2O15034 1052 aa4.81□□□□□ -1.64
RNU6-1006P-201ENST00000516998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.81□□□□□ -1.64
RNU6-1006P-201ENST00000516998 PCDHB8Q9UN66 801 aa4.81□□□□□ -1.64
RNU6-1006P-201ENST00000516998 GPR153Q6NV75 609 aa4.8□□□□□ -1.64
RNU6-1006P-201ENST00000516998 AXIN2Q9Y2T1 843 aa4.8□□□□□ -1.64
RNU6-1006P-201ENST00000516998 A0A0G2JS52 829 aa4.78□□□□□ -1.64
RNU6-1006P-201ENST00000516998 MKRN3Q13064 507 aaKnown RBP4.78□□□□□ -1.64
RNU6-1006P-201ENST00000516998 KHSRPQ92945 711 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU6-1006P-201ENST00000516998 NUBP1P53384 320 aa4.76□□□□□ -1.65
RNU6-1006P-201ENST00000516998 GOLGA2Q08379 1002 aa4.75□□□□□ -1.65
RNU6-1006P-201ENST00000516998 ARSIQ5FYB1 569 aa4.75□□□□□ -1.65
RNU6-1006P-201ENST00000516998 MIER1Q8N108 512 aa4.75□□□□□ -1.65
RNU6-1006P-201ENST00000516998 ZNF775Q96BV0 537 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1006P-201ENST00000516998 KCTD12Q96CX2 325 aaKnown RBP4.75□□□□□ -1.65
RNU6-1006P-201ENST00000516998 BOLA1Q9Y3E2 137 aa4.75□□□□□ -1.65
RNU6-1006P-201ENST00000516998 PYGBP11216 843 aa4.74□□□□□ -1.65
RNU6-1006P-201ENST00000516998 ZSWIM6Q9HCJ5 1215 aa4.74□□□□□ -1.65
RNU6-1006P-201ENST00000516998 ZNF316A6NFI3 1004 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1006P-201ENST00000516998 TRAF7Q6Q0C0 670 aa4.72□□□□□ -1.65
RNU6-1006P-201ENST00000516998 ADGRD1Q6QNK2 874 aa4.72□□□□□ -1.65
RNU6-1006P-201ENST00000516998 G3V3G9 751 aa4.71□□□□□ -1.66
RNU6-1006P-201ENST00000516998 PLEKHG5O94827 1062 aa4.71□□□□□ -1.66
RNU6-1006P-201ENST00000516998 DCAF8Q5TAQ9 597 aa4.71□□□□□ -1.66
RNU6-1006P-201ENST00000516998 TMEM92Q6UXU6 159 aa4.71□□□□□ -1.66
RNU6-1006P-201ENST00000516998 ILDR1Q86SU0 546 aaPredicted RBP4.71□□□□□ -1.66
RNU6-1006P-201ENST00000516998 PTPN5P54829 565 aa4.7□□□□□ -1.66
RNU6-1006P-201ENST00000516998 IFFO2Q5TF58 517 aa4.7□□□□□ -1.66
RNU6-1006P-201ENST00000516998 FAM212AQ96EL1 285 aa4.7□□□□□ -1.66
RNU6-1006P-201ENST00000516998 PBX2P40425 430 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms