RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 METRNQ9UJH8 293 aa4.85□□□□□ -1.63
RNU6-1258P-201ENST00000516911 POTEGQ6S5H5 508 aa4.84□□□□□ -1.63
RNU6-1258P-201ENST00000516911 MS4A3Q96HJ5 214 aa4.84□□□□□ -1.63
RNU6-1258P-201ENST00000516911 PCDH10Q9P2E7 1040 aa4.84□□□□□ -1.63
RNU6-1258P-201ENST00000516911 POTEB2H3BUK9 544 aa4.83□□□□□ -1.64
RNU6-1258P-201ENST00000516911 MIER1Q8N108 512 aa4.83□□□□□ -1.64
RNU6-1258P-201ENST00000516911 FAM163AQ96GL9 167 aaPredicted RBP4.83□□□□□ -1.64
RNU6-1258P-201ENST00000516911 ATMINO43313 823 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1258P-201ENST00000516911 ASTLQ6HA08 431 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1258P-201ENST00000516911 SEC24BO95487 1268 aa4.81□□□□□ -1.64
RNU6-1258P-201ENST00000516911 PELP1Q8IZL8 1130 aaKnown RBP4.81□□□□□ -1.64
RNU6-1258P-201ENST00000516911 MNX1P50219 401 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1258P-201ENST00000516911 PLCD3Q8N3E9 789 aa4.79□□□□□ -1.64
RNU6-1258P-201ENST00000516911 ATN1P54259 1190 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1258P-201ENST00000516911 ZBTB47Q9UFB7 747 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1258P-201ENST00000516911 KIF12Q96FN5 646 aa4.76□□□□□ -1.65
RNU6-1258P-201ENST00000516911 CCDC61Q9Y6R9 512 aa4.76□□□□□ -1.65
RNU6-1258P-201ENST00000516911 MAP3K13O43283 966 aa4.75□□□□□ -1.65
RNU6-1258P-201ENST00000516911 TIE1P35590 1138 aa4.75□□□□□ -1.65
RNU6-1258P-201ENST00000516911 BMP2KQ9NSY1 1161 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1258P-201ENST00000516911 PCDHB13Q9Y5F0 798 aa4.72□□□□□ -1.65
RNU6-1258P-201ENST00000516911 SGIP1Q9BQI5 828 aa4.71□□□□□ -1.66
RNU6-1258P-201ENST00000516911 TTLL13PA6NNM8 815 aa4.7□□□□□ -1.66
RNU6-1258P-201ENST00000516911 POTEJP0CG39 1038 aa4.7□□□□□ -1.66
RNU6-1258P-201ENST00000516911 PLCG2P16885 1265 aa4.7□□□□□ -1.66
RNU6-1258P-201ENST00000516911 RASEFQ8IZ41 740 aa4.7□□□□□ -1.66
RNU6-1258P-201ENST00000516911 IER5LQ5T953 404 aa4.69□□□□□ -1.66
RNU6-1258P-201ENST00000516911 PROM2Q8N271 834 aa4.69□□□□□ -1.66
RNU6-1258P-201ENST00000516911 SLAIN1Q8ND83 568 aa4.69□□□□□ -1.66
RNU6-1258P-201ENST00000516911 FAM212AQ96EL1 285 aa4.69□□□□□ -1.66
RNU6-1258P-201ENST00000516911 TRIM35Q9UPQ4 493 aa4.69□□□□□ -1.66
RNU6-1258P-201ENST00000516911 CDAN1Q8IWY9 1227 aa4.68□□□□□ -1.66
RNU6-1258P-201ENST00000516911 TRPC6Q9Y210 931 aa4.68□□□□□ -1.66
RNU6-1258P-201ENST00000516911 DCAF8Q5TAQ9 597 aa4.67□□□□□ -1.66
RNU6-1258P-201ENST00000516911 TMEM106CQ9BVX2 250 aa4.67□□□□□ -1.66
RNU6-1258P-201ENST00000516911 SNPHO15079 494 aa4.66□□□□□ -1.66
RNU6-1258P-201ENST00000516911 COLQQ9Y215 455 aaPredicted RBP4.66□□□□□ -1.66
RNU6-1258P-201ENST00000516911 POTEFA5A3E0 1075 aa4.65□□□□□ -1.67
RNU6-1258P-201ENST00000516911 GOLGA2Q08379 1002 aa4.65□□□□□ -1.67
RNU6-1258P-201ENST00000516911 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.64□□□□□ -1.67
RNU6-1258P-201ENST00000516911 IFNL1Q8IU54 200 aa4.63□□□□□ -1.67
RNU6-1258P-201ENST00000516911 ST18O60284 1047 aa4.62□□□□□ -1.67
RNU6-1258P-201ENST00000516911 LCE2DQ5TA82 110 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1258P-201ENST00000516911 NUBP1P53384 320 aa4.61□□□□□ -1.67
RNU6-1258P-201ENST00000516911 OCEL1Q9H607 264 aa4.61□□□□□ -1.67
RNU6-1258P-201ENST00000516911 FBXO3Q9UK99 471 aa4.61□□□□□ -1.67
RNU6-1258P-201ENST00000516911 PYGBP11216 843 aa4.6□□□□□ -1.67
RNU6-1258P-201ENST00000516911 MKRN3Q13064 507 aaKnown RBP4.6□□□□□ -1.67
RNU6-1258P-201ENST00000516911 KLHL34Q8N239 644 aa4.6□□□□□ -1.67
RNU6-1258P-201ENST00000516911 TMEM121BQ9BXQ6 578 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1258P-201ENST00000516911 G3V3G9 751 aa4.59□□□□□ -1.67
RNU6-1258P-201ENST00000516911 FKBP8Q14318 412 aa4.59□□□□□ -1.67
RNU6-1258P-201ENST00000516911 C3orf67Q6ZVT6 689 aa4.59□□□□□ -1.67
RNU6-1258P-201ENST00000516911 L3MBTL3Q96JM7 780 aaPredicted RBP4.58□□□□□ -1.68
RNU6-1258P-201ENST00000516911 IRX5P78411 483 aaPredicted RBP4.57□□□□□ -1.68
RNU6-1258P-201ENST00000516911 GSE1Q14687 1217 aa4.57□□□□□ -1.68
RNU6-1258P-201ENST00000516911 ZNF467Q7Z7K2 595 aaPredicted RBP4.56□□□□□ -1.68
RNU6-1258P-201ENST00000516911 PCDHB8Q9UN66 801 aa4.55□□□□□ -1.68
RNU6-1258P-201ENST00000516911 MARVELD3Q96A59 401 aa4.54□□□□□ -1.68
RNU6-1258P-201ENST00000516911 EMP3P54852 163 aa4.53□□□□□ -1.68
RNU6-1258P-201ENST00000516911 MMRN1Q13201 1228 aa4.53□□□□□ -1.68
RNU6-1258P-201ENST00000516911 SPNS2Q8IVW8 549 aa4.53□□□□□ -1.68
RNU6-1258P-201ENST00000516911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNU6-1258P-201ENST00000516911 FAM205CA6NFA0 338 aa4.51□□□□□ -1.69
RNU6-1258P-201ENST00000516911 ZNF710Q8N1W2 664 aa4.5□□□□□ -1.69
RNU6-1258P-201ENST00000516911 PSEN1P49768 467 aa4.49□□□□□ -1.69
RNU6-1258P-201ENST00000516911 CIZ1Q9ULV3 898 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1258P-201ENST00000516911 RIMBP2O15034 1052 aa4.47□□□□□ -1.69
RNU6-1258P-201ENST00000516911 CHRM1P11229 460 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1258P-201ENST00000516911 PDAP1Q13442 181 aaKnown RBP4.47□□□□□ -1.69
RNU6-1258P-201ENST00000516911 HS3ST6Q96QI5 342 aa4.47□□□□□ -1.69
RNU6-1258P-201ENST00000516911 VASPP50552 380 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1258P-201ENST00000516911 PDCD7Q8N8D1 485 aaKnown RBP4.46□□□□□ -1.7
RNU6-1258P-201ENST00000516911 ERBB3P21860 1342 aa4.46□□□□□ -1.7
RNU6-1258P-201ENST00000516911 DOK7Q18PE1 504 aa4.45□□□□□ -1.7
RNU6-1258P-201ENST00000516911 CABP2Q9NPB3 220 aa4.45□□□□□ -1.7
RNU6-1258P-201ENST00000516911 BOLA1Q9Y3E2 137 aa4.45□□□□□ -1.7
RNU6-1258P-201ENST00000516911 SPOCK2Q92563 424 aa4.43□□□□□ -1.7
RNU6-1258P-201ENST00000516911 HOXB1P14653 301 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1258P-201ENST00000516911 DPY19L2Q6NUT2 758 aa4.4□□□□□ -1.71
RNU6-1258P-201ENST00000516911 TRIM41Q8WV44 630 aa4.39□□□□□ -1.71
RNU6-1258P-201ENST00000516911 RNF166Q96A37 237 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1258P-201ENST00000516911 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
RNU6-1258P-201ENST00000516911 KRTAP3-2Q9BYR7 98 aa4.39□□□□□ -1.71
RNU6-1258P-201ENST00000516911 POTEB3A0JP26 581 aa4.37□□□□□ -1.71
RNU6-1258P-201ENST00000516911 VARS2Q5ST30 1063 aaKnown RBP4.37□□□□□ -1.71
RNU6-1258P-201ENST00000516911 POTEBQ6S5H4 581 aa4.37□□□□□ -1.71
RNU6-1258P-201ENST00000516911 MYT1LQ9UL68 1186 aa4.37□□□□□ -1.71
RNU6-1258P-201ENST00000516911 HOXB3P14651 431 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1258P-201ENST00000516911 EFCAB3Q8N7B9 438 aa4.36□□□□□ -1.71
RNU6-1258P-201ENST00000516911 ZSWIM6Q9HCJ5 1215 aa4.36□□□□□ -1.71
RNU6-1258P-201ENST00000516911 SOX12O15370 315 aa4.35□□□□□ -1.71
RNU6-1258P-201ENST00000516911 PTGER2P43116 358 aa4.35□□□□□ -1.71
RNU6-1258P-201ENST00000516911 ANKRD13DQ6ZTN6 518 aa4.34□□□□□ -1.71
RNU6-1258P-201ENST00000516911 ILDR1Q86SU0 546 aaPredicted RBP4.34□□□□□ -1.71
RNU6-1258P-201ENST00000516911 ZNF687Q8N1G0 1237 aa4.34□□□□□ -1.71
RNU6-1258P-201ENST00000516911 TAOK2Q9UL54 1235 aa4.34□□□□□ -1.71
RNU6-1258P-201ENST00000516911 IFNLR1Q8IU57 520 aaPredicted RBP4.32□□□□□ -1.72
RNU6-1258P-201ENST00000516911 MICALL2Q8IY33 904 aa4.31□□□□□ -1.72
RNU6-1258P-201ENST00000516911 RIOK3O14730 519 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms