RNA–Protein interactions for RNA: ENST00000516584.1

RNU6-1004P-201, Transcript of RNA, U6 small nuclear 1004, pseudogene, humanhuman

BASIC

Gene RNU6-1004P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1004P-201ENST00000516584 GTF3C3Q9Y5Q9 886 aa9.88□□□□□ -0.83
RNU6-1004P-201ENST00000516584 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
RNU6-1004P-201ENST00000516584 GSE1Q14687 1217 aa9.85□□□□□ -0.83
RNU6-1004P-201ENST00000516584 GTPBP6O43824 516 aaPredicted RBP9.83□□□□□ -0.84
RNU6-1004P-201ENST00000516584 RIOK3O14730 519 aaKnown RBP9.81□□□□□ -0.84
RNU6-1004P-201ENST00000516584 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
RNU6-1004P-201ENST00000516584 STK25O00506 426 aa9.78□□□□□ -0.84
RNU6-1004P-201ENST00000516584 NUBP1P53384 320 aa9.77□□□□□ -0.85
RNU6-1004P-201ENST00000516584 VGFO15240 615 aaPredicted RBP9.72□□□□□ -0.85
RNU6-1004P-201ENST00000516584 TMEM132AQ24JP5 1023 aa9.72□□□□□ -0.85
RNU6-1004P-201ENST00000516584 ERICH6Q7L0X2 663 aa9.72□□□□□ -0.85
RNU6-1004P-201ENST00000516584 STK24Q9Y6E0 443 aa9.69□□□□□ -0.86
RNU6-1004P-201ENST00000516584 FAM212AQ96EL1 285 aa9.68□□□□□ -0.86
RNU6-1004P-201ENST00000516584 ARXQ96QS3 562 aa9.68□□□□□ -0.86
RNU6-1004P-201ENST00000516584 BCL11BQ9C0K0 894 aaPredicted RBP9.67□□□□□ -0.86
RNU6-1004P-201ENST00000516584 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
RNU6-1004P-201ENST00000516584 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
RNU6-1004P-201ENST00000516584 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
RNU6-1004P-201ENST00000516584 RYDENQ9NUL5 291 aaKnown RBP9.64□□□□□ -0.87
RNU6-1004P-201ENST00000516584 C14orf37Q86TY3 774 aa9.63□□□□□ -0.87
RNU6-1004P-201ENST00000516584 CHRM1P11229 460 aaPredicted RBP9.61□□□□□ -0.87
RNU6-1004P-201ENST00000516584 POTEDQ86YR6 584 aa9.61□□□□□ -0.87
RNU6-1004P-201ENST00000516584 SGIP1Q9BQI5 828 aa9.61□□□□□ -0.87
RNU6-1004P-201ENST00000516584 LMOD2Q6P5Q4 547 aa9.58□□□□□ -0.88
RNU6-1004P-201ENST00000516584 CREBZFQ9NS37 354 aa9.58□□□□□ -0.88
RNU6-1004P-201ENST00000516584 WDR70Q9NW82 654 aa9.58□□□□□ -0.88
RNU6-1004P-201ENST00000516584 PYGBP11216 843 aa9.57□□□□□ -0.88
RNU6-1004P-201ENST00000516584 RASEFQ8IZ41 740 aa9.57□□□□□ -0.88
RNU6-1004P-201ENST00000516584 DAXXQ9UER7 740 aaPredicted RBP9.57□□□□□ -0.88
RNU6-1004P-201ENST00000516584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.56□□□□□ -0.88
RNU6-1004P-201ENST00000516584 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
RNU6-1004P-201ENST00000516584 MNX1P50219 401 aaPredicted RBP9.55□□□□□ -0.88
RNU6-1004P-201ENST00000516584 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
RNU6-1004P-201ENST00000516584 CADPS2Q86UW7 1296 aa9.54□□□□□ -0.88
RNU6-1004P-201ENST00000516584 CLEC11AQ9Y240 323 aa9.54□□□□□ -0.88
RNU6-1004P-201ENST00000516584 PRR29P0C7W0 189 aa9.53□□□□□ -0.88
RNU6-1004P-201ENST00000516584 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
RNU6-1004P-201ENST00000516584 BRPF1P55201 1214 aaPredicted RBP9.49□□□□□ -0.89
RNU6-1004P-201ENST00000516584 NEUROD2Q15784 382 aa9.43□□□□□ -0.9
RNU6-1004P-201ENST00000516584 ZC3H15Q8WU90 426 aaKnown RBP9.42□□□□□ -0.9
RNU6-1004P-201ENST00000516584 AKT1S1Q96B36 256 aa9.42□□□□□ -0.9
RNU6-1004P-201ENST00000516584 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
RNU6-1004P-201ENST00000516584 SLC24A3Q9HC58 644 aa9.39□□□□□ -0.91
RNU6-1004P-201ENST00000516584 SUPT5HO00267 1087 aaKnown RBP9.38□□□□□ -0.91
RNU6-1004P-201ENST00000516584 ARHGEF1Q92888 912 aaKnown RBP9.37□□□□□ -0.91
RNU6-1004P-201ENST00000516584 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
RNU6-1004P-201ENST00000516584 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
RNU6-1004P-201ENST00000516584 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
RNU6-1004P-201ENST00000516584 TSPYL2Q9H2G4 693 aaPredicted RBP9.36□□□□□ -0.91
RNU6-1004P-201ENST00000516584 SEMA3EO15041 775 aa9.35□□□□□ -0.91
RNU6-1004P-201ENST00000516584 RBM42Q9BTD8 480 aaKnown RBP9.35□□□□□ -0.91
RNU6-1004P-201ENST00000516584 E2F4Q16254 413 aa9.34□□□□□ -0.91
RNU6-1004P-201ENST00000516584 PCDHB8Q9UN66 801 aa9.34□□□□□ -0.91
RNU6-1004P-201ENST00000516584 PCDHB13Q9Y5F0 798 aa9.34□□□□□ -0.91
RNU6-1004P-201ENST00000516584 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
RNU6-1004P-201ENST00000516584 CACNB1Q02641 598 aaPredicted RBP9.32□□□□□ -0.92
RNU6-1004P-201ENST00000516584 PPP1R37O75864 691 aa9.31□□□□□ -0.92
RNU6-1004P-201ENST00000516584 PSEN1P49768 467 aa9.3□□□□□ -0.92
RNU6-1004P-201ENST00000516584 PITPNM1O00562 1244 aa9.25□□□□□ -0.93
RNU6-1004P-201ENST00000516584 ZMYND10O75800 440 aa9.25□□□□□ -0.93
RNU6-1004P-201ENST00000516584 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
RNU6-1004P-201ENST00000516584 NLRP6P59044 892 aa9.23□□□□□ -0.93
RNU6-1004P-201ENST00000516584 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
RNU6-1004P-201ENST00000516584 EFCAB3Q8N7B9 438 aa9.23□□□□□ -0.93
RNU6-1004P-201ENST00000516584 ZNF579Q8NAF0 562 aaKnown RBP9.23□□□□□ -0.93
RNU6-1004P-201ENST00000516584 FBXO22Q8NEZ5 403 aa9.22□□□□□ -0.93
RNU6-1004P-201ENST00000516584 PHF8Q9UPP1 1060 aa9.22□□□□□ -0.93
RNU6-1004P-201ENST00000516584 LARP6Q9BRS8 491 aaKnown RBP9.2□□□□□ -0.94
RNU6-1004P-201ENST00000516584 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
RNU6-1004P-201ENST00000516584 NCKAP5LQ9HCH0 1330 aa9.2□□□□□ -0.94
RNU6-1004P-201ENST00000516584 BARGINQ6ZT62 677 aa9.19□□□□□ -0.94
RNU6-1004P-201ENST00000516584 CCDC61Q9Y6R9 512 aa9.19□□□□□ -0.94
RNU6-1004P-201ENST00000516584 SOX12O15370 315 aa9.18□□□□□ -0.94
RNU6-1004P-201ENST00000516584 GPBP1L1Q9HC44 474 aaPredicted RBP9.17□□□□□ -0.94
RNU6-1004P-201ENST00000516584 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
RNU6-1004P-201ENST00000516584 PDE4AP27815 886 aa9.16□□□□□ -0.94
RNU6-1004P-201ENST00000516584 IFNL1Q8IU54 200 aa9.15□□□□□ -0.94
RNU6-1004P-201ENST00000516584 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
RNU6-1004P-201ENST00000516584 AK7Q96M32 723 aa9.14□□□□□ -0.95
RNU6-1004P-201ENST00000516584 MFSD10Q14728 455 aa9.13□□□□□ -0.95
RNU6-1004P-201ENST00000516584 RBM26Q5T8P6 1007 aaKnown RBP9.13□□□□□ -0.95
RNU6-1004P-201ENST00000516584 KRI1Q8N9T8 703 aaKnown RBP9.13□□□□□ -0.95
RNU6-1004P-201ENST00000516584 DDX27Q96GQ7 796 aaKnown RBP9.13□□□□□ -0.95
RNU6-1004P-201ENST00000516584 UBTFP17480 764 aaKnown RBP9.11□□□□□ -0.95
RNU6-1004P-201ENST00000516584 GPIHBP1Q8IV16 184 aa9.11□□□□□ -0.95
RNU6-1004P-201ENST00000516584 PODXL2Q9NZ53 605 aa9.11□□□□□ -0.95
RNU6-1004P-201ENST00000516584 ARIH1Q9Y4X5 557 aaPredicted RBP9.11□□□□□ -0.95
RNU6-1004P-201ENST00000516584 MAP3K13O43283 966 aa9.1□□□□□ -0.95
RNU6-1004P-201ENST00000516584 ZMYND15Q9H091 742 aa9.1□□□□□ -0.95
RNU6-1004P-201ENST00000516584 CRISPLD2Q9H0B8 497 aa9.1□□□□□ -0.95
RNU6-1004P-201ENST00000516584 MLLT3P42568 568 aaPredicted RBP9.09□□□□□ -0.95
RNU6-1004P-201ENST00000516584 KDM4CQ9H3R0 1056 aa9.09□□□□□ -0.95
RNU6-1004P-201ENST00000516584 MS4A4AQ96JQ5 239 aa9.08□□□□□ -0.96
RNU6-1004P-201ENST00000516584 PAK3O75914 559 aaPredicted RBP9.06□□□□□ -0.96
RNU6-1004P-201ENST00000516584 CAMK2BQ13554 666 aa9.06□□□□□ -0.96
RNU6-1004P-201ENST00000516584 RSPH6AQ9H0K4 717 aa9.06□□□□□ -0.96
RNU6-1004P-201ENST00000516584 KIF12Q96FN5 646 aa9.05□□□□□ -0.96
RNU6-1004P-201ENST00000516584 TRIM66O15016 1216 aa9.04□□□□□ -0.96
RNU6-1004P-201ENST00000516584 PRKAR2AP13861 404 aaKnown RBP9.04□□□□□ -0.96
RNU6-1004P-201ENST00000516584 PDE4DQ08499 809 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms