RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 CCDC61Q9Y6R9 512 aa8.83□□□□□ -1
SCARNA16.2-201ENST00000516520 NUBP1P53384 320 aa8.81□□□□□ -1
SCARNA16.2-201ENST00000516520 FAM212AQ96EL1 285 aa8.8□□□□□ -1
SCARNA16.2-201ENST00000516520 POTEIP0CG38 1075 aa8.79□□□□□ -1
SCARNA16.2-201ENST00000516520 MS4A3Q96HJ5 214 aa8.78□□□□□ -1
SCARNA16.2-201ENST00000516520 KLHL34Q8N239 644 aa8.77□□□□□ -1.01
SCARNA16.2-201ENST00000516520 KIF12Q96FN5 646 aa8.76□□□□□ -1.01
SCARNA16.2-201ENST00000516520 SGIP1Q9BQI5 828 aa8.72□□□□□ -1.01
SCARNA16.2-201ENST00000516520 MAP3K13O43283 966 aa8.71□□□□□ -1.02
SCARNA16.2-201ENST00000516520 DCAF8Q5TAQ9 597 aa8.71□□□□□ -1.02
SCARNA16.2-201ENST00000516520 GSE1Q14687 1217 aa8.69□□□□□ -1.02
SCARNA16.2-201ENST00000516520 LHX8Q68G74 356 aa8.69□□□□□ -1.02
SCARNA16.2-201ENST00000516520 ASTLQ6HA08 431 aaPredicted RBP8.69□□□□□ -1.02
SCARNA16.2-201ENST00000516520 PCDHB13Q9Y5F0 798 aa8.68□□□□□ -1.02
SCARNA16.2-201ENST00000516520 TIE1P35590 1138 aa8.67□□□□□ -1.02
SCARNA16.2-201ENST00000516520 ATMINO43313 823 aaPredicted RBP8.66□□□□□ -1.02
SCARNA16.2-201ENST00000516520 IFNLR1Q8IU57 520 aaPredicted RBP8.66□□□□□ -1.02
SCARNA16.2-201ENST00000516520 SPOCK2Q92563 424 aa8.66□□□□□ -1.02
SCARNA16.2-201ENST00000516520 SLC39A7Q92504 469 aa8.64□□□□□ -1.03
SCARNA16.2-201ENST00000516520 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
SCARNA16.2-201ENST00000516520 C7P10643 843 aa8.62□□□□□ -1.03
SCARNA16.2-201ENST00000516520 PYGBP11216 843 aa8.62□□□□□ -1.03
SCARNA16.2-201ENST00000516520 ATN1P54259 1190 aaPredicted RBP8.61□□□□□ -1.03
SCARNA16.2-201ENST00000516520 IFNL1Q8IU54 200 aa8.61□□□□□ -1.03
SCARNA16.2-201ENST00000516520 PELP1Q8IZL8 1130 aaKnown RBP8.61□□□□□ -1.03
SCARNA16.2-201ENST00000516520 TRPC6Q9Y210 931 aa8.61□□□□□ -1.03
SCARNA16.2-201ENST00000516520 METRNQ9UJH8 293 aa8.6□□□□□ -1.03
SCARNA16.2-201ENST00000516520 TTLL13PA6NNM8 815 aa8.59□□□□□ -1.03
SCARNA16.2-201ENST00000516520 CHRM1P11229 460 aaPredicted RBP8.57□□□□□ -1.04
SCARNA16.2-201ENST00000516520 ZNF467Q7Z7K2 595 aaPredicted RBP8.57□□□□□ -1.04
SCARNA16.2-201ENST00000516520 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
SCARNA16.2-201ENST00000516520 TMEM106CQ9BVX2 250 aa8.55□□□□□ -1.04
SCARNA16.2-201ENST00000516520 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
SCARNA16.2-201ENST00000516520 IER5LQ5T953 404 aa8.53□□□□□ -1.04
SCARNA16.2-201ENST00000516520 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
SCARNA16.2-201ENST00000516520 PCDHB8Q9UN66 801 aa8.52□□□□□ -1.05
SCARNA16.2-201ENST00000516520 SEC24BO95487 1268 aa8.5□□□□□ -1.05
SCARNA16.2-201ENST00000516520 POTEB2H3BUK9 544 aa8.49□□□□□ -1.05
SCARNA16.2-201ENST00000516520 MAMSTRQ6ZN01 415 aa8.49□□□□□ -1.05
SCARNA16.2-201ENST00000516520 OTUD5Q96G74 571 aa8.46□□□□□ -1.06
SCARNA16.2-201ENST00000516520 PDAP1Q13442 181 aaKnown RBP8.45□□□□□ -1.06
SCARNA16.2-201ENST00000516520 POTEFA5A3E0 1075 aa8.44□□□□□ -1.06
SCARNA16.2-201ENST00000516520 PLCG2P16885 1265 aa8.44□□□□□ -1.06
SCARNA16.2-201ENST00000516520 PSEN1P49768 467 aa8.44□□□□□ -1.06
SCARNA16.2-201ENST00000516520 GOLGA2Q08379 1002 aa8.44□□□□□ -1.06
SCARNA16.2-201ENST00000516520 SCUBE2Q9NQ36 999 aa8.44□□□□□ -1.06
SCARNA16.2-201ENST00000516520 COLQQ9Y215 455 aaPredicted RBP8.43□□□□□ -1.06
SCARNA16.2-201ENST00000516520 POTEJP0CG39 1038 aa8.4□□□□□ -1.06
SCARNA16.2-201ENST00000516520 IRX5P78411 483 aaPredicted RBP8.4□□□□□ -1.06
SCARNA16.2-201ENST00000516520 MKRN3Q13064 507 aaKnown RBP8.4□□□□□ -1.06
SCARNA16.2-201ENST00000516520 OCEL1Q9H607 264 aa8.39□□□□□ -1.07
SCARNA16.2-201ENST00000516520 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
SCARNA16.2-201ENST00000516520 CABP2Q9NPB3 220 aa8.33□□□□□ -1.08
SCARNA16.2-201ENST00000516520 TAOK2Q9UL54 1235 aa8.33□□□□□ -1.08
SCARNA16.2-201ENST00000516520 VGFO15240 615 aaPredicted RBP8.32□□□□□ -1.08
SCARNA16.2-201ENST00000516520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.32□□□□□ -1.08
SCARNA16.2-201ENST00000516520 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
SCARNA16.2-201ENST00000516520 PDCD7Q8N8D1 485 aaKnown RBP8.3□□□□□ -1.08
SCARNA16.2-201ENST00000516520 ECM2O94769 699 aaPredicted RBP8.29□□□□□ -1.08
SCARNA16.2-201ENST00000516520 L3MBTL3Q96JM7 780 aaPredicted RBP8.29□□□□□ -1.08
SCARNA16.2-201ENST00000516520 ILDR1Q86SU0 546 aaPredicted RBP8.28□□□□□ -1.08
SCARNA16.2-201ENST00000516520 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.27□□□□□ -1.09
SCARNA16.2-201ENST00000516520 ZFP91Q96JP5 570 aaPredicted RBP8.27□□□□□ -1.09
SCARNA16.2-201ENST00000516520 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
SCARNA16.2-201ENST00000516520 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.26□□□□□ -1.09
SCARNA16.2-201ENST00000516520 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
SCARNA16.2-201ENST00000516520 G3V3G9 751 aa8.24□□□□□ -1.09
SCARNA16.2-201ENST00000516520 PKD2Q13563 968 aa8.24□□□□□ -1.09
SCARNA16.2-201ENST00000516520 EFCAB3Q8N7B9 438 aa8.24□□□□□ -1.09
SCARNA16.2-201ENST00000516520 SOX12O15370 315 aa8.22□□□□□ -1.09
SCARNA16.2-201ENST00000516520 BCL11BQ9C0K0 894 aaPredicted RBP8.2□□□□□ -1.1
SCARNA16.2-201ENST00000516520 FAM163AQ96GL9 167 aaPredicted RBP8.19□□□□□ -1.1
SCARNA16.2-201ENST00000516520 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
SCARNA16.2-201ENST00000516520 STK25O00506 426 aa8.18□□□□□ -1.1
SCARNA16.2-201ENST00000516520 SNPHO15079 494 aa8.18□□□□□ -1.1
SCARNA16.2-201ENST00000516520 RGL2O15211 777 aa8.18□□□□□ -1.1
SCARNA16.2-201ENST00000516520 DPY19L2Q6NUT2 758 aa8.18□□□□□ -1.1
SCARNA16.2-201ENST00000516520 STK24Q9Y6E0 443 aa8.18□□□□□ -1.1
SCARNA16.2-201ENST00000516520 POTEMA6NI47 508 aa8.17□□□□□ -1.1
SCARNA16.2-201ENST00000516520 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
SCARNA16.2-201ENST00000516520 NLRP6P59044 892 aa8.15□□□□□ -1.1
SCARNA16.2-201ENST00000516520 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
SCARNA16.2-201ENST00000516520 PHF8Q9UPP1 1060 aa8.14□□□□□ -1.11
SCARNA16.2-201ENST00000516520 TMEM121BQ9BXQ6 578 aaPredicted RBP8.13□□□□□ -1.11
SCARNA16.2-201ENST00000516520 MS4A4AQ96JQ5 239 aa8.11□□□□□ -1.11
SCARNA16.2-201ENST00000516520 MICALL2Q8IY33 904 aa8.1□□□□□ -1.11
SCARNA16.2-201ENST00000516520 PCDH10Q9P2E7 1040 aa8.1□□□□□ -1.11
SCARNA16.2-201ENST00000516520 ST18O60284 1047 aa8.09□□□□□ -1.11
SCARNA16.2-201ENST00000516520 FBXO22Q8NEZ5 403 aa8.09□□□□□ -1.11
SCARNA16.2-201ENST00000516520 MFRPQ9BY79 579 aa8.08□□□□□ -1.12
SCARNA16.2-201ENST00000516520 HS6ST3Q8IZP7 471 aa8.06□□□□□ -1.12
SCARNA16.2-201ENST00000516520 DOK7Q18PE1 504 aa8.02□□□□□ -1.13
SCARNA16.2-201ENST00000516520 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
SCARNA16.2-201ENST00000516520 RIMBP2O15034 1052 aa7.99□□□□□ -1.13
SCARNA16.2-201ENST00000516520 TMEM92Q6UXU6 159 aa7.99□□□□□ -1.13
SCARNA16.2-201ENST00000516520 ZNF710Q8N1W2 664 aa7.99□□□□□ -1.13
SCARNA16.2-201ENST00000516520 HOXB3P14651 431 aaPredicted RBP7.98□□□□□ -1.13
SCARNA16.2-201ENST00000516520 DNAJC5Q9H3Z4 198 aa7.98□□□□□ -1.13
SCARNA16.2-201ENST00000516520 EMP3P54852 163 aa7.97□□□□□ -1.13
SCARNA16.2-201ENST00000516520 RYDENQ9NUL5 291 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms