RNA–Protein interactions for RNA: ENST00000516384.1

SCARNA15.1-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 125 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.1-201ENST00000516384 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
SCARNA15.1-201ENST00000516384 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
SCARNA15.1-201ENST00000516384 C7P10643 843 aa12.82□□□□□ -0.36
SCARNA15.1-201ENST00000516384 ATMINO43313 823 aaPredicted RBP12.81□□□□□ -0.36
SCARNA15.1-201ENST00000516384 MAMSTRQ6ZN01 415 aa12.78□□□□□ -0.36
SCARNA15.1-201ENST00000516384 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
SCARNA15.1-201ENST00000516384 POTEJP0CG39 1038 aa12.75□□□□□ -0.37
SCARNA15.1-201ENST00000516384 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
SCARNA15.1-201ENST00000516384 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
SCARNA15.1-201ENST00000516384 ATN1P54259 1190 aaPredicted RBP12.68□□□□□ -0.38
SCARNA15.1-201ENST00000516384 LCE2DQ5TA82 110 aaPredicted RBP12.68□□□□□ -0.38
SCARNA15.1-201ENST00000516384 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
SCARNA15.1-201ENST00000516384 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
SCARNA15.1-201ENST00000516384 KIF12Q96FN5 646 aa12.63□□□□□ -0.39
SCARNA15.1-201ENST00000516384 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
SCARNA15.1-201ENST00000516384 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
SCARNA15.1-201ENST00000516384 PROM2Q8N271 834 aa12.58□□□□□ -0.4
SCARNA15.1-201ENST00000516384 TIE1P35590 1138 aa12.55□□□□□ -0.4
SCARNA15.1-201ENST00000516384 MAP3K13O43283 966 aa12.54□□□□□ -0.4
SCARNA15.1-201ENST00000516384 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
SCARNA15.1-201ENST00000516384 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
SCARNA15.1-201ENST00000516384 MIER1Q8N108 512 aa12.53□□□□□ -0.4
SCARNA15.1-201ENST00000516384 SEC24BO95487 1268 aa12.51□□□□□ -0.41
SCARNA15.1-201ENST00000516384 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
SCARNA15.1-201ENST00000516384 TTLL13PA6NNM8 815 aa12.45□□□□□ -0.42
SCARNA15.1-201ENST00000516384 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
SCARNA15.1-201ENST00000516384 CDAN1Q8IWY9 1227 aa12.41□□□□□ -0.42
SCARNA15.1-201ENST00000516384 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
SCARNA15.1-201ENST00000516384 IER5LQ5T953 404 aa12.39□□□□□ -0.43
SCARNA15.1-201ENST00000516384 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
SCARNA15.1-201ENST00000516384 SGIP1Q9BQI5 828 aa12.39□□□□□ -0.43
SCARNA15.1-201ENST00000516384 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
SCARNA15.1-201ENST00000516384 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
SCARNA15.1-201ENST00000516384 SLAIN1Q8ND83 568 aa12.32□□□□□ -0.44
SCARNA15.1-201ENST00000516384 PLCG2P16885 1265 aa12.27□□□□□ -0.45
SCARNA15.1-201ENST00000516384 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
SCARNA15.1-201ENST00000516384 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
SCARNA15.1-201ENST00000516384 ST18O60284 1047 aa12.26□□□□□ -0.45
SCARNA15.1-201ENST00000516384 NUBP1P53384 320 aa12.26□□□□□ -0.45
SCARNA15.1-201ENST00000516384 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
SCARNA15.1-201ENST00000516384 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
SCARNA15.1-201ENST00000516384 MMRN1Q13201 1228 aa12.16□□□□□ -0.46
SCARNA15.1-201ENST00000516384 SPNS2Q8IVW8 549 aa12.13□□□□□ -0.47
SCARNA15.1-201ENST00000516384 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
SCARNA15.1-201ENST00000516384 OCEL1Q9H607 264 aa12.13□□□□□ -0.47
SCARNA15.1-201ENST00000516384 SNPHO15079 494 aa12.12□□□□□ -0.47
SCARNA15.1-201ENST00000516384 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.11□□□□□ -0.47
SCARNA15.1-201ENST00000516384 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
SCARNA15.1-201ENST00000516384 PYGBP11216 843 aa12.07□□□□□ -0.48
SCARNA15.1-201ENST00000516384 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
SCARNA15.1-201ENST00000516384 PCDHB8Q9UN66 801 aa12.01□□□□□ -0.49
SCARNA15.1-201ENST00000516384 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
SCARNA15.1-201ENST00000516384 GOLGA2Q08379 1002 aa11.96□□□□□ -0.49
SCARNA15.1-201ENST00000516384 FKBP8Q14318 412 aa11.96□□□□□ -0.49
SCARNA15.1-201ENST00000516384 EMP3P54852 163 aa11.93□□□□□ -0.5
SCARNA15.1-201ENST00000516384 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
SCARNA15.1-201ENST00000516384 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
SCARNA15.1-201ENST00000516384 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
SCARNA15.1-201ENST00000516384 PDCD7Q8N8D1 485 aaKnown RBP11.91□□□□□ -0.5
SCARNA15.1-201ENST00000516384 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
SCARNA15.1-201ENST00000516384 GSE1Q14687 1217 aa11.87□□□□□ -0.51
SCARNA15.1-201ENST00000516384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
SCARNA15.1-201ENST00000516384 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
SCARNA15.1-201ENST00000516384 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
SCARNA15.1-201ENST00000516384 FAM205CA6NFA0 338 aa11.83□□□□□ -0.52
SCARNA15.1-201ENST00000516384 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
SCARNA15.1-201ENST00000516384 KRTAP3-2Q9BYR7 98 aa11.8□□□□□ -0.52
SCARNA15.1-201ENST00000516384 PSEN1P49768 467 aa11.79□□□□□ -0.52
SCARNA15.1-201ENST00000516384 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
SCARNA15.1-201ENST00000516384 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
SCARNA15.1-201ENST00000516384 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
SCARNA15.1-201ENST00000516384 G3V3G9 751 aa11.76□□□□□ -0.53
SCARNA15.1-201ENST00000516384 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
SCARNA15.1-201ENST00000516384 PDAP1Q13442 181 aaKnown RBP11.7□□□□□ -0.54
SCARNA15.1-201ENST00000516384 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
SCARNA15.1-201ENST00000516384 ILDR1Q86SU0 546 aaPredicted RBP11.69□□□□□ -0.54
SCARNA15.1-201ENST00000516384 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
SCARNA15.1-201ENST00000516384 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
SCARNA15.1-201ENST00000516384 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
SCARNA15.1-201ENST00000516384 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
SCARNA15.1-201ENST00000516384 HOXB1P14653 301 aaPredicted RBP11.63□□□□□ -0.55
SCARNA15.1-201ENST00000516384 ERBB3P21860 1342 aa11.62□□□□□ -0.55
SCARNA15.1-201ENST00000516384 DOK7Q18PE1 504 aa11.62□□□□□ -0.55
SCARNA15.1-201ENST00000516384 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
SCARNA15.1-201ENST00000516384 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
SCARNA15.1-201ENST00000516384 RNF166Q96A37 237 aaPredicted RBP11.56□□□□□ -0.56
SCARNA15.1-201ENST00000516384 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
SCARNA15.1-201ENST00000516384 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
SCARNA15.1-201ENST00000516384 MYT1LQ9UL68 1186 aa11.49□□□□□ -0.57
SCARNA15.1-201ENST00000516384 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
SCARNA15.1-201ENST00000516384 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
SCARNA15.1-201ENST00000516384 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
SCARNA15.1-201ENST00000516384 ZNF687Q8N1G0 1237 aa11.44□□□□□ -0.58
SCARNA15.1-201ENST00000516384 MICALL2Q8IY33 904 aa11.4□□□□□ -0.58
SCARNA15.1-201ENST00000516384 PTGER2P43116 358 aa11.39□□□□□ -0.59
SCARNA15.1-201ENST00000516384 TMEM92Q6UXU6 159 aa11.38□□□□□ -0.59
SCARNA15.1-201ENST00000516384 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
SCARNA15.1-201ENST00000516384 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
SCARNA15.1-201ENST00000516384 SOX12O15370 315 aa11.33□□□□□ -0.6
SCARNA15.1-201ENST00000516384 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms