RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 HRCP23327 699 aa11.34□□□□□ -0.59
RNU6ATAC39P-201ENST00000516309 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
RNU6ATAC39P-201ENST00000516309 NEUROD2Q15784 382 aa11.28□□□□□ -0.6
RNU6ATAC39P-201ENST00000516309 U3KPZ7 1027 aaPredicted RBP11.28□□□□□ -0.6
RNU6ATAC39P-201ENST00000516309 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 CAPN15O75808 1086 aa11.26□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 ZMYND15Q9H091 742 aa11.2□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 EIF5BO60841 1220 aaKnown RBP11.13□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 ARID3AQ99856 593 aa11.13□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 MIER1Q8N108 512 aa11.1□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 ZC3H15Q8WU90 426 aaKnown RBP11.06□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 PDIA4P13667 645 aaKnown RBP11.04□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 SHROOM4Q9ULL8 1493 aa11.04□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 ABCB7O75027 752 aa10.98□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 STK25O00506 426 aa10.96□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 HMGB1P09429 215 aaKnown RBP10.94□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 GSE1Q14687 1217 aa10.91□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 POLA2Q14181 598 aa10.89□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 APBB1O00213 710 aa10.87□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 RBM42Q9BTD8 480 aaKnown RBP10.87□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 ARID3CA6NKF2 412 aa10.84□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 ZMYND10O75800 440 aa10.83□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 ARHGEF1Q92888 912 aaKnown RBP10.82□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 STK24Q9Y6E0 443 aa10.8□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 KCTD17Q8N5Z5 321 aa10.79□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 CDK11BP21127 795 aaKnown RBP10.78□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 CDK11AQ9UQ88 783 aaPredicted RBP10.78□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 TESPA1A2RU30 521 aaPredicted RBP10.77□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 HAX1O00165 279 aa10.77□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 HSP90B1P14625 803 aaKnown RBP10.75□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 EVX2Q03828 476 aa10.75□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 AK7Q96M32 723 aa10.75□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 SEMA3EO15041 775 aa10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 MKRN3Q13064 507 aaKnown RBP10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 SGIP1Q9BQI5 828 aa10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 RAD21O60216 631 aa10.72□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 DCAF8Q5TAQ9 597 aa10.72□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 IGSF3O75054 1194 aa10.71□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 KDM4CQ9H3R0 1056 aa10.71□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 FLIIQ13045 1269 aa10.7□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 PABPN1Q86U42 306 aaKnown RBP eCLIP10.7□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.69□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 CCDC82Q8N4S0 544 aa10.69□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 LHX8Q68G74 356 aa10.68□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 E2F4Q16254 413 aa10.65□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 SPDYE2BA6NHP3 402 aa10.63□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 SPDYE6P0CI01 402 aa10.63□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 SPDYE2Q495Y8 402 aa10.63□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 NUBP1P53384 320 aa10.62□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 RGS22Q8NE09 1264 aa10.62□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 TMCO4Q5TGY1 634 aa10.6□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 A6NJR5 290 aa10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 CHRM1P11229 460 aaPredicted RBP10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 PDE4DQ08499 809 aa10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 FAM212AQ96EL1 285 aa10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 TRAK2O60296 914 aa10.57□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 TRIM66O15016 1216 aa10.54□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms