RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 HRCP23327 699 aa11.34□□□□□ -0.59
RNU6ATAC39P-201ENST00000516309 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
RNU6ATAC39P-201ENST00000516309 NEUROD2Q15784 382 aa11.28□□□□□ -0.6
RNU6ATAC39P-201ENST00000516309 U3KPZ7 1027 aaPredicted RBP11.28□□□□□ -0.6
RNU6ATAC39P-201ENST00000516309 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 CAPN15O75808 1086 aa11.26□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
RNU6ATAC39P-201ENST00000516309 ZMYND15Q9H091 742 aa11.2□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
RNU6ATAC39P-201ENST00000516309 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 EIF5BO60841 1220 aaKnown RBP11.13□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 ARID3AQ99856 593 aa11.13□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 MIER1Q8N108 512 aa11.1□□□□□ -0.63
RNU6ATAC39P-201ENST00000516309 ZC3H15Q8WU90 426 aaKnown RBP11.06□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 PDIA4P13667 645 aaKnown RBP11.04□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 SHROOM4Q9ULL8 1493 aa11.04□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
RNU6ATAC39P-201ENST00000516309 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 ABCB7O75027 752 aa10.98□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 STK25O00506 426 aa10.96□□□□□ -0.65
RNU6ATAC39P-201ENST00000516309 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 HMGB1P09429 215 aaKnown RBP10.94□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 GSE1Q14687 1217 aa10.91□□□□□ -0.66
RNU6ATAC39P-201ENST00000516309 POLA2Q14181 598 aa10.89□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 APBB1O00213 710 aa10.87□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 RBM42Q9BTD8 480 aaKnown RBP10.87□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 ARID3CA6NKF2 412 aa10.84□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
RNU6ATAC39P-201ENST00000516309 ZMYND10O75800 440 aa10.83□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 ARHGEF1Q92888 912 aaKnown RBP10.82□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 STK24Q9Y6E0 443 aa10.8□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 KCTD17Q8N5Z5 321 aa10.79□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 CDK11BP21127 795 aaKnown RBP10.78□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 CDK11AQ9UQ88 783 aaPredicted RBP10.78□□□□□ -0.68
RNU6ATAC39P-201ENST00000516309 TESPA1A2RU30 521 aaPredicted RBP10.77□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 HAX1O00165 279 aa10.77□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 HSP90B1P14625 803 aaKnown RBP10.75□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 EVX2Q03828 476 aa10.75□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 AK7Q96M32 723 aa10.75□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 SEMA3EO15041 775 aa10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 MKRN3Q13064 507 aaKnown RBP10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 SGIP1Q9BQI5 828 aa10.73□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 RAD21O60216 631 aa10.72□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 DCAF8Q5TAQ9 597 aa10.72□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 IGSF3O75054 1194 aa10.71□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 KDM4CQ9H3R0 1056 aa10.71□□□□□ -0.69
RNU6ATAC39P-201ENST00000516309 FLIIQ13045 1269 aa10.7□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 PABPN1Q86U42 306 aaKnown RBP eCLIP10.7□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.69□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 CCDC82Q8N4S0 544 aa10.69□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 LHX8Q68G74 356 aa10.68□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 E2F4Q16254 413 aa10.65□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
RNU6ATAC39P-201ENST00000516309 SPDYE2BA6NHP3 402 aa10.63□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 SPDYE6P0CI01 402 aa10.63□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 SPDYE2Q495Y8 402 aa10.63□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 NUBP1P53384 320 aa10.62□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 RGS22Q8NE09 1264 aa10.62□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 TMCO4Q5TGY1 634 aa10.6□□□□□ -0.71
RNU6ATAC39P-201ENST00000516309 A6NJR5 290 aa10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 CHRM1P11229 460 aaPredicted RBP10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 PDE4DQ08499 809 aa10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 FAM212AQ96EL1 285 aa10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 TRAK2O60296 914 aa10.57□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 TRIM66O15016 1216 aa10.54□□□□□ -0.72
RNU6ATAC39P-201ENST00000516309 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms