RNA–Protein interactions for RNA: ENST00000516288.1

RNU6-346P-201, Transcript of RNA, U6 small nuclear 346, pseudogene, humanhuman

BASIC

Gene RNU6-346P, Length 111 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-346P-201ENST00000516288 ASTLQ6HA08 431 aaPredicted RBP8.95□□□□□ -0.98
RNU6-346P-201ENST00000516288 PELP1Q8IZL8 1130 aaKnown RBP8.95□□□□□ -0.98
RNU6-346P-201ENST00000516288 ATMINO43313 823 aaPredicted RBP8.9□□□□□ -0.98
RNU6-346P-201ENST00000516288 POTEJP0CG39 1038 aa8.85□□□□□ -0.99
RNU6-346P-201ENST00000516288 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
RNU6-346P-201ENST00000516288 MS4A3Q96HJ5 214 aa8.85□□□□□ -0.99
RNU6-346P-201ENST00000516288 CDAN1Q8IWY9 1227 aa8.81□□□□□ -1
RNU6-346P-201ENST00000516288 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
RNU6-346P-201ENST00000516288 ATN1P54259 1190 aaPredicted RBP8.76□□□□□ -1.01
RNU6-346P-201ENST00000516288 SPDYE4A6NLX3 237 aa8.72□□□□□ -1.01
RNU6-346P-201ENST00000516288 SEC24BO95487 1268 aa8.71□□□□□ -1.02
RNU6-346P-201ENST00000516288 TSPYL2Q9H2G4 693 aaPredicted RBP8.7□□□□□ -1.02
RNU6-346P-201ENST00000516288 TIE1P35590 1138 aa8.69□□□□□ -1.02
RNU6-346P-201ENST00000516288 BMP2KQ9NSY1 1161 aaPredicted RBP8.68□□□□□ -1.02
RNU6-346P-201ENST00000516288 POTEFA5A3E0 1075 aa8.66□□□□□ -1.02
RNU6-346P-201ENST00000516288 KIF12Q96FN5 646 aa8.66□□□□□ -1.02
RNU6-346P-201ENST00000516288 CCDC61Q9Y6R9 512 aa8.66□□□□□ -1.02
RNU6-346P-201ENST00000516288 MMRN1Q13201 1228 aa8.63□□□□□ -1.03
RNU6-346P-201ENST00000516288 IER5LQ5T953 404 aa8.62□□□□□ -1.03
RNU6-346P-201ENST00000516288 ST18O60284 1047 aa8.61□□□□□ -1.03
RNU6-346P-201ENST00000516288 SLAIN1Q8ND83 568 aa8.61□□□□□ -1.03
RNU6-346P-201ENST00000516288 PLEKHG5O94827 1062 aa8.59□□□□□ -1.03
RNU6-346P-201ENST00000516288 SPNS2Q8IVW8 549 aa8.59□□□□□ -1.03
RNU6-346P-201ENST00000516288 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
RNU6-346P-201ENST00000516288 COLQQ9Y215 455 aaPredicted RBP8.58□□□□□ -1.04
RNU6-346P-201ENST00000516288 MAP3K13O43283 966 aa8.57□□□□□ -1.04
RNU6-346P-201ENST00000516288 TTLL13PA6NNM8 815 aa8.56□□□□□ -1.04
RNU6-346P-201ENST00000516288 SNPHO15079 494 aa8.56□□□□□ -1.04
RNU6-346P-201ENST00000516288 SGIP1Q9BQI5 828 aa8.54□□□□□ -1.04
RNU6-346P-201ENST00000516288 TRPC6Q9Y210 931 aa8.54□□□□□ -1.04
RNU6-346P-201ENST00000516288 TRIM35Q9UPQ4 493 aa8.52□□□□□ -1.05
RNU6-346P-201ENST00000516288 PLCG2P16885 1265 aa8.5□□□□□ -1.05
RNU6-346P-201ENST00000516288 PCDHB13Q9Y5F0 798 aa8.45□□□□□ -1.06
RNU6-346P-201ENST00000516288 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.43□□□□□ -1.06
RNU6-346P-201ENST00000516288 RASEFQ8IZ41 740 aa8.41□□□□□ -1.06
RNU6-346P-201ENST00000516288 MIER1Q8N108 512 aa8.41□□□□□ -1.06
RNU6-346P-201ENST00000516288 TMEM106CQ9BVX2 250 aa8.39□□□□□ -1.07
RNU6-346P-201ENST00000516288 MARVELD3Q96A59 401 aa8.38□□□□□ -1.07
RNU6-346P-201ENST00000516288 OCEL1Q9H607 264 aa8.38□□□□□ -1.07
RNU6-346P-201ENST00000516288 ZBTB47Q9UFB7 747 aaPredicted RBP8.37□□□□□ -1.07
RNU6-346P-201ENST00000516288 IRX5P78411 483 aaPredicted RBP8.36□□□□□ -1.07
RNU6-346P-201ENST00000516288 PROM2Q8N271 834 aa8.36□□□□□ -1.07
RNU6-346P-201ENST00000516288 CSRNP3Q8WYN3 585 aa8.36□□□□□ -1.07
RNU6-346P-201ENST00000516288 EMP3P54852 163 aa8.35□□□□□ -1.07
RNU6-346P-201ENST00000516288 IFNL1Q8IU54 200 aa8.33□□□□□ -1.08
RNU6-346P-201ENST00000516288 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
RNU6-346P-201ENST00000516288 FAM212AQ96EL1 285 aa8.29□□□□□ -1.08
RNU6-346P-201ENST00000516288 C3orf67Q6ZVT6 689 aa8.28□□□□□ -1.08
RNU6-346P-201ENST00000516288 HS3ST6Q96QI5 342 aa8.28□□□□□ -1.08
RNU6-346P-201ENST00000516288 FAM205CA6NFA0 338 aa8.26□□□□□ -1.09
RNU6-346P-201ENST00000516288 L3MBTL3Q96JM7 780 aaPredicted RBP8.26□□□□□ -1.09
RNU6-346P-201ENST00000516288 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
RNU6-346P-201ENST00000516288 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
RNU6-346P-201ENST00000516288 NUBP1P53384 320 aa8.23□□□□□ -1.09
RNU6-346P-201ENST00000516288 GOLGA2Q08379 1002 aa8.18□□□□□ -1.1
RNU6-346P-201ENST00000516288 RNF166Q96A37 237 aaPredicted RBP8.18□□□□□ -1.1
RNU6-346P-201ENST00000516288 POTEB3A0JP26 581 aa8.17□□□□□ -1.1
RNU6-346P-201ENST00000516288 POTEBQ6S5H4 581 aa8.17□□□□□ -1.1
RNU6-346P-201ENST00000516288 MKRN3Q13064 507 aaKnown RBP8.16□□□□□ -1.1
RNU6-346P-201ENST00000516288 DCAF8Q5TAQ9 597 aa8.12□□□□□ -1.11
RNU6-346P-201ENST00000516288 PDCD7Q8N8D1 485 aaKnown RBP8.12□□□□□ -1.11
RNU6-346P-201ENST00000516288 ZNF710Q8N1W2 664 aa8.11□□□□□ -1.11
RNU6-346P-201ENST00000516288 ERBB3P21860 1342 aa8.1□□□□□ -1.11
RNU6-346P-201ENST00000516288 G3V3G9 751 aa8.1□□□□□ -1.11
RNU6-346P-201ENST00000516288 MYT1LQ9UL68 1186 aa8.1□□□□□ -1.11
RNU6-346P-201ENST00000516288 PYGBP11216 843 aa8.09□□□□□ -1.11
RNU6-346P-201ENST00000516288 PTGER2P43116 358 aa8.09□□□□□ -1.11
RNU6-346P-201ENST00000516288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNU6-346P-201ENST00000516288 HOXB1P14653 301 aaPredicted RBP8.08□□□□□ -1.12
RNU6-346P-201ENST00000516288 PCDHB8Q9UN66 801 aa8.08□□□□□ -1.12
RNU6-346P-201ENST00000516288 ZNF467Q7Z7K2 595 aaPredicted RBP8.07□□□□□ -1.12
RNU6-346P-201ENST00000516288 RIMBP2O15034 1052 aa8.06□□□□□ -1.12
RNU6-346P-201ENST00000516288 DOK7Q18PE1 504 aa8.06□□□□□ -1.12
RNU6-346P-201ENST00000516288 HOXB3P14651 431 aaPredicted RBP8.01□□□□□ -1.13
RNU6-346P-201ENST00000516288 BOLA1Q9Y3E2 137 aa7.99□□□□□ -1.13
RNU6-346P-201ENST00000516288 GSE1Q14687 1217 aa7.98□□□□□ -1.13
RNU6-346P-201ENST00000516288 VARS2Q5ST30 1063 aaKnown RBP7.98□□□□□ -1.13
RNU6-346P-201ENST00000516288 ZNF687Q8N1G0 1237 aa7.98□□□□□ -1.13
RNU6-346P-201ENST00000516288 PSEN1P49768 467 aa7.96□□□□□ -1.14
RNU6-346P-201ENST00000516288 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.14
RNU6-346P-201ENST00000516288 EHMT2Q96KQ7 1210 aa7.96□□□□□ -1.14
RNU6-346P-201ENST00000516288 ZSWIM6Q9HCJ5 1215 aa7.96□□□□□ -1.14
RNU6-346P-201ENST00000516288 CHRM1P11229 460 aaPredicted RBP7.93□□□□□ -1.14
RNU6-346P-201ENST00000516288 DPY19L2Q6NUT2 758 aa7.9□□□□□ -1.14
RNU6-346P-201ENST00000516288 PDAP1Q13442 181 aaKnown RBP7.89□□□□□ -1.15
RNU6-346P-201ENST00000516288 ANKRD13DQ6ZTN6 518 aa7.88□□□□□ -1.15
RNU6-346P-201ENST00000516288 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
RNU6-346P-201ENST00000516288 CABP2Q9NPB3 220 aa7.85□□□□□ -1.15
RNU6-346P-201ENST00000516288 FBXO3Q9UK99 471 aa7.84□□□□□ -1.15
RNU6-346P-201ENST00000516288 HCSTQ9UBK5 93 aa7.83□□□□□ -1.16
RNU6-346P-201ENST00000516288 KLHL34Q8N239 644 aa7.82□□□□□ -1.16
RNU6-346P-201ENST00000516288 GPR153Q6NV75 609 aa7.81□□□□□ -1.16
RNU6-346P-201ENST00000516288 LSM11P83369 360 aaKnown RBP eCLIP7.8□□□□□ -1.16
RNU6-346P-201ENST00000516288 PBX2P40425 430 aa7.77□□□□□ -1.17
RNU6-346P-201ENST00000516288 ZNF316A6NFI3 1004 aaPredicted RBP7.76□□□□□ -1.17
RNU6-346P-201ENST00000516288 ARSIQ5FYB1 569 aa7.73□□□□□ -1.17
RNU6-346P-201ENST00000516288 MICALL2Q8IY33 904 aa7.72□□□□□ -1.17
RNU6-346P-201ENST00000516288 RGS20O76081 388 aa7.71□□□□□ -1.18
RNU6-346P-201ENST00000516288 FKBP8Q14318 412 aa7.68□□□□□ -1.18
RNU6-346P-201ENST00000516288 TMEM92Q6UXU6 159 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms