RNA–Protein interactions for RNA: ENST00000516206.1

RNU6-904P-201, Transcript of RNA, U6 small nuclear 904, pseudogene, humanhuman

BASIC

Gene RNU6-904P, Length 101 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-904P-201ENST00000516206 SCUBE2Q9NQ36 999 aa6.21□□□□□ -1.42
RNU6-904P-201ENST00000516206 CREBZFQ9NS37 354 aa6.2□□□□□ -1.42
RNU6-904P-201ENST00000516206 ATMINO43313 823 aaPredicted RBP6.18□□□□□ -1.42
RNU6-904P-201ENST00000516206 ASTLQ6HA08 431 aaPredicted RBP6.18□□□□□ -1.42
RNU6-904P-201ENST00000516206 MS4A3Q96HJ5 214 aa6.15□□□□□ -1.42
RNU6-904P-201ENST00000516206 MMRN1Q13201 1228 aa6.11□□□□□ -1.43
RNU6-904P-201ENST00000516206 ATN1P54259 1190 aaPredicted RBP6.09□□□□□ -1.43
RNU6-904P-201ENST00000516206 POTEFA5A3E0 1075 aa6.07□□□□□ -1.44
RNU6-904P-201ENST00000516206 SPNS2Q8IVW8 549 aa6.07□□□□□ -1.44
RNU6-904P-201ENST00000516206 NPM1P06748 294 aaKnown RBP eCLIP6.06□□□□□ -1.44
RNU6-904P-201ENST00000516206 STAG3Q9UJ98 1225 aa6.06□□□□□ -1.44
RNU6-904P-201ENST00000516206 ST18O60284 1047 aa6.04□□□□□ -1.44
RNU6-904P-201ENST00000516206 MNX1P50219 401 aaPredicted RBP6.01□□□□□ -1.45
RNU6-904P-201ENST00000516206 BMP2KQ9NSY1 1161 aaPredicted RBP6.01□□□□□ -1.45
RNU6-904P-201ENST00000516206 COLQQ9Y215 455 aaPredicted RBP6□□□□□ -1.45
RNU6-904P-201ENST00000516206 SEC24BO95487 1268 aa5.99□□□□□ -1.45
RNU6-904P-201ENST00000516206 SLAIN1Q8ND83 568 aa5.99□□□□□ -1.45
RNU6-904P-201ENST00000516206 TSPYL2Q9H2G4 693 aaPredicted RBP5.99□□□□□ -1.45
RNU6-904P-201ENST00000516206 TRPC6Q9Y210 931 aa5.98□□□□□ -1.45
RNU6-904P-201ENST00000516206 KIF12Q96FN5 646 aa5.94□□□□□ -1.46
RNU6-904P-201ENST00000516206 CCDC61Q9Y6R9 512 aa5.93□□□□□ -1.46
RNU6-904P-201ENST00000516206 TIE1P35590 1138 aa5.92□□□□□ -1.46
RNU6-904P-201ENST00000516206 MARVELD3Q96A59 401 aa5.92□□□□□ -1.46
RNU6-904P-201ENST00000516206 TTLL13PA6NNM8 815 aa5.9□□□□□ -1.46
RNU6-904P-201ENST00000516206 TMEM121BQ9BXQ6 578 aaPredicted RBP5.9□□□□□ -1.46
RNU6-904P-201ENST00000516206 MAP3K13O43283 966 aa5.89□□□□□ -1.47
RNU6-904P-201ENST00000516206 IER5LQ5T953 404 aa5.87□□□□□ -1.47
RNU6-904P-201ENST00000516206 TRIM35Q9UPQ4 493 aa5.87□□□□□ -1.47
RNU6-904P-201ENST00000516206 SPDYE4A6NLX3 237 aa5.85□□□□□ -1.47
RNU6-904P-201ENST00000516206 SNPHO15079 494 aa5.83□□□□□ -1.48
RNU6-904P-201ENST00000516206 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
RNU6-904P-201ENST00000516206 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
RNU6-904P-201ENST00000516206 PLCG2P16885 1265 aa5.82□□□□□ -1.48
RNU6-904P-201ENST00000516206 EMP3P54852 163 aa5.82□□□□□ -1.48
RNU6-904P-201ENST00000516206 POTEB3A0JP26 581 aa5.79□□□□□ -1.48
RNU6-904P-201ENST00000516206 POTEBQ6S5H4 581 aa5.79□□□□□ -1.48
RNU6-904P-201ENST00000516206 HS3ST6Q96QI5 342 aa5.78□□□□□ -1.48
RNU6-904P-201ENST00000516206 FAM205CA6NFA0 338 aa5.77□□□□□ -1.49
RNU6-904P-201ENST00000516206 RASEFQ8IZ41 740 aa5.77□□□□□ -1.49
RNU6-904P-201ENST00000516206 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.77□□□□□ -1.49
RNU6-904P-201ENST00000516206 PCDHB13Q9Y5F0 798 aa5.77□□□□□ -1.49
RNU6-904P-201ENST00000516206 TMEM106CQ9BVX2 250 aa5.76□□□□□ -1.49
RNU6-904P-201ENST00000516206 IRX5P78411 483 aaPredicted RBP5.75□□□□□ -1.49
RNU6-904P-201ENST00000516206 RNF166Q96A37 237 aaPredicted RBP5.72□□□□□ -1.49
RNU6-904P-201ENST00000516206 IFNL1Q8IU54 200 aa5.71□□□□□ -1.5
RNU6-904P-201ENST00000516206 SGIP1Q9BQI5 828 aa5.71□□□□□ -1.5
RNU6-904P-201ENST00000516206 OCEL1Q9H607 264 aa5.71□□□□□ -1.5
RNU6-904P-201ENST00000516206 PLEKHG5O94827 1062 aa5.67□□□□□ -1.5
RNU6-904P-201ENST00000516206 C3orf67Q6ZVT6 689 aa5.67□□□□□ -1.5
RNU6-904P-201ENST00000516206 MIER1Q8N108 512 aa5.65□□□□□ -1.5
RNU6-904P-201ENST00000516206 MYT1LQ9UL68 1186 aa5.64□□□□□ -1.51
RNU6-904P-201ENST00000516206 ERBB3P21860 1342 aa5.59□□□□□ -1.51
RNU6-904P-201ENST00000516206 PDCD7Q8N8D1 485 aaKnown RBP5.58□□□□□ -1.52
RNU6-904P-201ENST00000516206 L3MBTL3Q96JM7 780 aaPredicted RBP5.58□□□□□ -1.52
RNU6-904P-201ENST00000516206 NUBP1P53384 320 aa5.57□□□□□ -1.52
RNU6-904P-201ENST00000516206 PROM2Q8N271 834 aa5.57□□□□□ -1.52
RNU6-904P-201ENST00000516206 HOXB3P14651 431 aaPredicted RBP5.55□□□□□ -1.52
RNU6-904P-201ENST00000516206 ZNF710Q8N1W2 664 aa5.55□□□□□ -1.52
RNU6-904P-201ENST00000516206 PLCD3Q8N3E9 789 aa5.55□□□□□ -1.52
RNU6-904P-201ENST00000516206 FAM212AQ96EL1 285 aa5.55□□□□□ -1.52
RNU6-904P-201ENST00000516206 HOXB1P14653 301 aaPredicted RBP5.54□□□□□ -1.52
RNU6-904P-201ENST00000516206 VARS2Q5ST30 1063 aaKnown RBP5.54□□□□□ -1.52
RNU6-904P-201ENST00000516206 PCDHB8Q9UN66 801 aa5.54□□□□□ -1.52
RNU6-904P-201ENST00000516206 PYGBP11216 843 aa5.52□□□□□ -1.53
RNU6-904P-201ENST00000516206 MKRN3Q13064 507 aaKnown RBP5.52□□□□□ -1.53
RNU6-904P-201ENST00000516206 GOLGA2Q08379 1002 aa5.51□□□□□ -1.53
RNU6-904P-201ENST00000516206 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU6-904P-201ENST00000516206 PTGER2P43116 358 aa5.5□□□□□ -1.53
RNU6-904P-201ENST00000516206 PLA2G2EQ9NZK7 142 aa5.5□□□□□ -1.53
RNU6-904P-201ENST00000516206 CSRNP3Q8WYN3 585 aa5.49□□□□□ -1.53
RNU6-904P-201ENST00000516206 ZBTB47Q9UFB7 747 aaPredicted RBP5.49□□□□□ -1.53
RNU6-904P-201ENST00000516206 DOK7Q18PE1 504 aa5.48□□□□□ -1.53
RNU6-904P-201ENST00000516206 ANKRD13DQ6ZTN6 518 aa5.48□□□□□ -1.53
RNU6-904P-201ENST00000516206 ZNF687Q8N1G0 1237 aa5.48□□□□□ -1.53
RNU6-904P-201ENST00000516206 DPY19L2Q6NUT2 758 aa5.47□□□□□ -1.53
RNU6-904P-201ENST00000516206 DCAF8Q5TAQ9 597 aa5.46□□□□□ -1.54
RNU6-904P-201ENST00000516206 G3V3G9 751 aa5.45□□□□□ -1.54
RNU6-904P-201ENST00000516206 RIMBP2O15034 1052 aa5.44□□□□□ -1.54
RNU6-904P-201ENST00000516206 BOLA1Q9Y3E2 137 aa5.43□□□□□ -1.54
RNU6-904P-201ENST00000516206 LSM11P83369 360 aaKnown RBP eCLIP5.39□□□□□ -1.55
RNU6-904P-201ENST00000516206 ZNF467Q7Z7K2 595 aaPredicted RBP5.39□□□□□ -1.55
RNU6-904P-201ENST00000516206 ILDR1Q86SU0 546 aaPredicted RBP5.39□□□□□ -1.55
RNU6-904P-201ENST00000516206 PSEN1P49768 467 aa5.38□□□□□ -1.55
RNU6-904P-201ENST00000516206 HCSTQ9UBK5 93 aa5.38□□□□□ -1.55
RNU6-904P-201ENST00000516206 GPR153Q6NV75 609 aa5.36□□□□□ -1.55
RNU6-904P-201ENST00000516206 ZSWIM6Q9HCJ5 1215 aa5.36□□□□□ -1.55
RNU6-904P-201ENST00000516206 IRX2Q9BZI1 471 aaPredicted RBP5.35□□□□□ -1.55
RNU6-904P-201ENST00000516206 ARSIQ5FYB1 569 aa5.33□□□□□ -1.56
RNU6-904P-201ENST00000516206 CABP2Q9NPB3 220 aa5.33□□□□□ -1.56
RNU6-904P-201ENST00000516206 ZNF316A6NFI3 1004 aaPredicted RBP5.31□□□□□ -1.56
RNU6-904P-201ENST00000516206 TMEM92Q6UXU6 159 aa5.31□□□□□ -1.56
RNU6-904P-201ENST00000516206 KHSRPQ92945 711 aaKnown RBP eCLIP5.31□□□□□ -1.56
RNU6-904P-201ENST00000516206 PDAP1Q13442 181 aaKnown RBP5.29□□□□□ -1.56
RNU6-904P-201ENST00000516206 AXIN2Q9Y2T1 843 aa5.29□□□□□ -1.56
RNU6-904P-201ENST00000516206 PBX2P40425 430 aa5.27□□□□□ -1.57
RNU6-904P-201ENST00000516206 POTEEQ6S8J3 1075 aa5.27□□□□□ -1.57
RNU6-904P-201ENST00000516206 GSE1Q14687 1217 aa5.26□□□□□ -1.57
RNU6-904P-201ENST00000516206 RGS20O76081 388 aa5.25□□□□□ -1.57
RNU6-904P-201ENST00000516206 CHRM1P11229 460 aaPredicted RBP5.25□□□□□ -1.57
RNU6-904P-201ENST00000516206 MICALL2Q8IY33 904 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms