RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 ASTLQ6HA08 431 aaPredicted RBP6.73□□□□□ -1.33
RN7SKP43-201ENST00000516173 ATMINO43313 823 aaPredicted RBP6.69□□□□□ -1.34
RN7SKP43-201ENST00000516173 SPNS2Q8IVW8 549 aa6.66□□□□□ -1.34
RN7SKP43-201ENST00000516173 CREBZFQ9NS37 354 aa6.66□□□□□ -1.34
RN7SKP43-201ENST00000516173 MS4A3Q96HJ5 214 aa6.63□□□□□ -1.35
RN7SKP43-201ENST00000516173 SLC4A1APQ9BWU0 796 aaKnown RBP6.62□□□□□ -1.35
RN7SKP43-201ENST00000516173 ATN1P54259 1190 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP43-201ENST00000516173 ST18O60284 1047 aa6.57□□□□□ -1.36
RN7SKP43-201ENST00000516173 POTEFA5A3E0 1075 aa6.56□□□□□ -1.36
RN7SKP43-201ENST00000516173 NPM1P06748 294 aaKnown RBP eCLIP6.54□□□□□ -1.36
RN7SKP43-201ENST00000516173 ZBTB22O15209 634 aa6.53□□□□□ -1.36
RN7SKP43-201ENST00000516173 STAG3Q9UJ98 1225 aa6.52□□□□□ -1.37
RN7SKP43-201ENST00000516173 SLAIN1Q8ND83 568 aa6.49□□□□□ -1.37
RN7SKP43-201ENST00000516173 SEC24BO95487 1268 aa6.48□□□□□ -1.37
RN7SKP43-201ENST00000516173 TMEM121BQ9BXQ6 578 aaPredicted RBP6.48□□□□□ -1.37
RN7SKP43-201ENST00000516173 BMP2KQ9NSY1 1161 aaPredicted RBP6.48□□□□□ -1.37
RN7SKP43-201ENST00000516173 COLQQ9Y215 455 aaPredicted RBP6.46□□□□□ -1.38
RN7SKP43-201ENST00000516173 MNX1P50219 401 aaPredicted RBP6.44□□□□□ -1.38
RN7SKP43-201ENST00000516173 TIE1P35590 1138 aa6.42□□□□□ -1.38
RN7SKP43-201ENST00000516173 MARVELD3Q96A59 401 aa6.4□□□□□ -1.38
RN7SKP43-201ENST00000516173 TRPC6Q9Y210 931 aa6.4□□□□□ -1.38
RN7SKP43-201ENST00000516173 IER5LQ5T953 404 aa6.38□□□□□ -1.39
RN7SKP43-201ENST00000516173 KIF12Q96FN5 646 aa6.38□□□□□ -1.39
RN7SKP43-201ENST00000516173 TSPYL2Q9H2G4 693 aaPredicted RBP6.38□□□□□ -1.39
RN7SKP43-201ENST00000516173 CCDC61Q9Y6R9 512 aa6.38□□□□□ -1.39
RN7SKP43-201ENST00000516173 SNPHO15079 494 aa6.37□□□□□ -1.39
RN7SKP43-201ENST00000516173 TTLL13PA6NNM8 815 aa6.36□□□□□ -1.39
RN7SKP43-201ENST00000516173 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
RN7SKP43-201ENST00000516173 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
RN7SKP43-201ENST00000516173 TRIM35Q9UPQ4 493 aa6.33□□□□□ -1.4
RN7SKP43-201ENST00000516173 EMP3P54852 163 aa6.32□□□□□ -1.4
RN7SKP43-201ENST00000516173 MAP3K13O43283 966 aa6.31□□□□□ -1.4
RN7SKP43-201ENST00000516173 PLCG2P16885 1265 aa6.29□□□□□ -1.4
RN7SKP43-201ENST00000516173 HS3ST6Q96QI5 342 aa6.29□□□□□ -1.4
RN7SKP43-201ENST00000516173 NISCHQ9Y2I1 1504 aa6.27□□□□□ -1.41
RN7SKP43-201ENST00000516173 RNF166Q96A37 237 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP43-201ENST00000516173 POTEB3A0JP26 581 aa6.25□□□□□ -1.41
RN7SKP43-201ENST00000516173 FAM205CA6NFA0 338 aa6.25□□□□□ -1.41
RN7SKP43-201ENST00000516173 POTEBQ6S5H4 581 aa6.25□□□□□ -1.41
RN7SKP43-201ENST00000516173 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.24□□□□□ -1.41
RN7SKP43-201ENST00000516173 IRX5P78411 483 aaPredicted RBP6.21□□□□□ -1.42
RN7SKP43-201ENST00000516173 SGIP1Q9BQI5 828 aa6.19□□□□□ -1.42
RN7SKP43-201ENST00000516173 SPDYE4A6NLX3 237 aa6.18□□□□□ -1.42
RN7SKP43-201ENST00000516173 PCDHB13Q9Y5F0 798 aa6.17□□□□□ -1.42
RN7SKP43-201ENST00000516173 TMEM106CQ9BVX2 250 aa6.16□□□□□ -1.42
RN7SKP43-201ENST00000516173 OCEL1Q9H607 264 aa6.16□□□□□ -1.42
RN7SKP43-201ENST00000516173 MYT1LQ9UL68 1186 aa6.16□□□□□ -1.42
RN7SKP43-201ENST00000516173 RASEFQ8IZ41 740 aa6.14□□□□□ -1.43
RN7SKP43-201ENST00000516173 C3orf67Q6ZVT6 689 aa6.12□□□□□ -1.43
RN7SKP43-201ENST00000516173 IFNL1Q8IU54 200 aa6.1□□□□□ -1.43
RN7SKP43-201ENST00000516173 PTGER2P43116 358 aa6.06□□□□□ -1.44
RN7SKP43-201ENST00000516173 PLEKHG5O94827 1062 aa6.05□□□□□ -1.44
RN7SKP43-201ENST00000516173 ERBB3P21860 1342 aa6.04□□□□□ -1.44
RN7SKP43-201ENST00000516173 L3MBTL3Q96JM7 780 aaPredicted RBP6.02□□□□□ -1.45
RN7SKP43-201ENST00000516173 HOXB1P14653 301 aaPredicted RBP6.01□□□□□ -1.45
RN7SKP43-201ENST00000516173 PLA2G2EQ9NZK7 142 aa6.01□□□□□ -1.45
RN7SKP43-201ENST00000516173 PDCD7Q8N8D1 485 aaKnown RBP6□□□□□ -1.45
RN7SKP43-201ENST00000516173 HOXB3P14651 431 aaPredicted RBP5.99□□□□□ -1.45
RN7SKP43-201ENST00000516173 ZNF710Q8N1W2 664 aa5.99□□□□□ -1.45
RN7SKP43-201ENST00000516173 VARS2Q5ST30 1063 aaKnown RBP5.98□□□□□ -1.45
RN7SKP43-201ENST00000516173 MIER1Q8N108 512 aa5.96□□□□□ -1.46
RN7SKP43-201ENST00000516173 ZNF687Q8N1G0 1237 aa5.95□□□□□ -1.46
RN7SKP43-201ENST00000516173 DOK7Q18PE1 504 aa5.94□□□□□ -1.46
RN7SKP43-201ENST00000516173 FAM212AQ96EL1 285 aa5.93□□□□□ -1.46
RN7SKP43-201ENST00000516173 RIMBP2O15034 1052 aa5.91□□□□□ -1.46
RN7SKP43-201ENST00000516173 NUBP1P53384 320 aa5.91□□□□□ -1.46
RN7SKP43-201ENST00000516173 MKRN3Q13064 507 aaKnown RBP5.91□□□□□ -1.46
RN7SKP43-201ENST00000516173 PROM2Q8N271 834 aa5.91□□□□□ -1.46
RN7SKP43-201ENST00000516173 GOLGA2Q08379 1002 aa5.9□□□□□ -1.46
RN7SKP43-201ENST00000516173 ANKRD13DQ6ZTN6 518 aa5.9□□□□□ -1.46
RN7SKP43-201ENST00000516173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.89□□□□□ -1.47
RN7SKP43-201ENST00000516173 IRX2Q9BZI1 471 aaPredicted RBP5.87□□□□□ -1.47
RN7SKP43-201ENST00000516173 HCSTQ9UBK5 93 aa5.87□□□□□ -1.47
RN7SKP43-201ENST00000516173 ZBTB47Q9UFB7 747 aaPredicted RBP5.87□□□□□ -1.47
RN7SKP43-201ENST00000516173 G3V3G9 751 aa5.86□□□□□ -1.47
RN7SKP43-201ENST00000516173 DCAF8Q5TAQ9 597 aa5.86□□□□□ -1.47
RN7SKP43-201ENST00000516173 PCDHB8Q9UN66 801 aa5.86□□□□□ -1.47
RN7SKP43-201ENST00000516173 PLCD3Q8N3E9 789 aa5.85□□□□□ -1.47
RN7SKP43-201ENST00000516173 ZSWIM6Q9HCJ5 1215 aa5.84□□□□□ -1.47
RN7SKP43-201ENST00000516173 PYGBP11216 843 aa5.83□□□□□ -1.48
RN7SKP43-201ENST00000516173 LSM11P83369 360 aaKnown RBP eCLIP5.83□□□□□ -1.48
RN7SKP43-201ENST00000516173 BOLA1Q9Y3E2 137 aa5.83□□□□□ -1.48
RN7SKP43-201ENST00000516173 RGS20O76081 388 aa5.81□□□□□ -1.48
RN7SKP43-201ENST00000516173 ILDR1Q86SU0 546 aaPredicted RBP5.81□□□□□ -1.48
RN7SKP43-201ENST00000516173 DPY19L2Q6NUT2 758 aa5.79□□□□□ -1.48
RN7SKP43-201ENST00000516173 GPR153Q6NV75 609 aa5.77□□□□□ -1.49
RN7SKP43-201ENST00000516173 ZNF467Q7Z7K2 595 aaPredicted RBP5.76□□□□□ -1.49
RN7SKP43-201ENST00000516173 ZNF316A6NFI3 1004 aaPredicted RBP5.73□□□□□ -1.49
RN7SKP43-201ENST00000516173 PBX2P40425 430 aa5.73□□□□□ -1.49
RN7SKP43-201ENST00000516173 PSEN1P49768 467 aa5.71□□□□□ -1.5
RN7SKP43-201ENST00000516173 ARSIQ5FYB1 569 aa5.7□□□□□ -1.5
RN7SKP43-201ENST00000516173 Q6ZNB5 142 aa5.7□□□□□ -1.5
RN7SKP43-201ENST00000516173 IFFO2Q5TF58 517 aa5.66□□□□□ -1.5
RN7SKP43-201ENST00000516173 ADGRD1Q6QNK2 874 aa5.66□□□□□ -1.5
RN7SKP43-201ENST00000516173 A0A0G2JS52 829 aa5.65□□□□□ -1.5
RN7SKP43-201ENST00000516173 TMEM92Q6UXU6 159 aa5.65□□□□□ -1.5
RN7SKP43-201ENST00000516173 CABP2Q9NPB3 220 aa5.65□□□□□ -1.5
RN7SKP43-201ENST00000516173 AXIN2Q9Y2T1 843 aa5.65□□□□□ -1.5
RN7SKP43-201ENST00000516173 POTEEQ6S8J3 1075 aa5.64□□□□□ -1.51
RN7SKP43-201ENST00000516173 KHSRPQ92945 711 aaKnown RBP eCLIP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms