RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 MAMSTRQ6ZN01 415 aa8.96□□□□□ -0.98
RNU6-1278P-201ENST00000516130 SLC39A7Q92504 469 aa8.96□□□□□ -0.98
RNU6-1278P-201ENST00000516130 ATMINO43313 823 aaPredicted RBP8.94□□□□□ -0.98
RNU6-1278P-201ENST00000516130 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
RNU6-1278P-201ENST00000516130 MS4A3Q96HJ5 214 aa8.91□□□□□ -0.98
RNU6-1278P-201ENST00000516130 SPDYE4A6NLX3 237 aa8.86□□□□□ -0.99
RNU6-1278P-201ENST00000516130 SCUBE2Q9NQ36 999 aa8.85□□□□□ -0.99
RNU6-1278P-201ENST00000516130 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
RNU6-1278P-201ENST00000516130 ATN1P54259 1190 aaPredicted RBP8.81□□□□□ -1
RNU6-1278P-201ENST00000516130 POTEFA5A3E0 1075 aa8.78□□□□□ -1
RNU6-1278P-201ENST00000516130 CCDC61Q9Y6R9 512 aa8.78□□□□□ -1
RNU6-1278P-201ENST00000516130 CSRNP3Q8WYN3 585 aa8.76□□□□□ -1.01
RNU6-1278P-201ENST00000516130 KIF12Q96FN5 646 aa8.75□□□□□ -1.01
RNU6-1278P-201ENST00000516130 BMP2KQ9NSY1 1161 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1278P-201ENST00000516130 TSPYL2Q9H2G4 693 aaPredicted RBP8.73□□□□□ -1.01
RNU6-1278P-201ENST00000516130 TIE1P35590 1138 aa8.72□□□□□ -1.01
RNU6-1278P-201ENST00000516130 CDAN1Q8IWY9 1227 aa8.7□□□□□ -1.02
RNU6-1278P-201ENST00000516130 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
RNU6-1278P-201ENST00000516130 PROM2Q8N271 834 aa8.66□□□□□ -1.02
RNU6-1278P-201ENST00000516130 COLQQ9Y215 455 aaPredicted RBP8.66□□□□□ -1.02
RNU6-1278P-201ENST00000516130 MAP3K13O43283 966 aa8.65□□□□□ -1.02
RNU6-1278P-201ENST00000516130 TTLL13PA6NNM8 815 aa8.64□□□□□ -1.03
RNU6-1278P-201ENST00000516130 IER5LQ5T953 404 aa8.64□□□□□ -1.03
RNU6-1278P-201ENST00000516130 SEC24BO95487 1268 aa8.63□□□□□ -1.03
RNU6-1278P-201ENST00000516130 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
RNU6-1278P-201ENST00000516130 ST18O60284 1047 aa8.58□□□□□ -1.04
RNU6-1278P-201ENST00000516130 RASEFQ8IZ41 740 aa8.58□□□□□ -1.04
RNU6-1278P-201ENST00000516130 TRIM35Q9UPQ4 493 aa8.57□□□□□ -1.04
RNU6-1278P-201ENST00000516130 SLAIN1Q8ND83 568 aa8.56□□□□□ -1.04
RNU6-1278P-201ENST00000516130 PLEKHG5O94827 1062 aa8.53□□□□□ -1.04
RNU6-1278P-201ENST00000516130 MMRN1Q13201 1228 aa8.53□□□□□ -1.04
RNU6-1278P-201ENST00000516130 TMEM121BQ9BXQ6 578 aaPredicted RBP8.52□□□□□ -1.05
RNU6-1278P-201ENST00000516130 SPNS2Q8IVW8 549 aa8.51□□□□□ -1.05
RNU6-1278P-201ENST00000516130 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
RNU6-1278P-201ENST00000516130 MIER1Q8N108 512 aa8.47□□□□□ -1.05
RNU6-1278P-201ENST00000516130 PLCG2P16885 1265 aa8.46□□□□□ -1.06
RNU6-1278P-201ENST00000516130 IRX5P78411 483 aaPredicted RBP8.46□□□□□ -1.06
RNU6-1278P-201ENST00000516130 IFNL1Q8IU54 200 aa8.45□□□□□ -1.06
RNU6-1278P-201ENST00000516130 SNPHO15079 494 aa8.44□□□□□ -1.06
RNU6-1278P-201ENST00000516130 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
RNU6-1278P-201ENST00000516130 NUBP1P53384 320 aa8.41□□□□□ -1.06
RNU6-1278P-201ENST00000516130 OCEL1Q9H607 264 aa8.39□□□□□ -1.07
RNU6-1278P-201ENST00000516130 ZBTB47Q9UFB7 747 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1278P-201ENST00000516130 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
RNU6-1278P-201ENST00000516130 MARVELD3Q96A59 401 aa8.36□□□□□ -1.07
RNU6-1278P-201ENST00000516130 PLCD3Q8N3E9 789 aa8.35□□□□□ -1.07
RNU6-1278P-201ENST00000516130 FAM212AQ96EL1 285 aa8.35□□□□□ -1.07
RNU6-1278P-201ENST00000516130 EHMT2Q96KQ7 1210 aa8.33□□□□□ -1.08
RNU6-1278P-201ENST00000516130 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
RNU6-1278P-201ENST00000516130 KRTAP3-2Q9BYR7 98 aa8.3□□□□□ -1.08
RNU6-1278P-201ENST00000516130 EMP3P54852 163 aa8.28□□□□□ -1.08
RNU6-1278P-201ENST00000516130 PDCD7Q8N8D1 485 aaKnown RBP8.27□□□□□ -1.09
RNU6-1278P-201ENST00000516130 POTEB3A0JP26 581 aa8.25□□□□□ -1.09
RNU6-1278P-201ENST00000516130 POTEBQ6S5H4 581 aa8.25□□□□□ -1.09
RNU6-1278P-201ENST00000516130 HS3ST6Q96QI5 342 aa8.25□□□□□ -1.09
RNU6-1278P-201ENST00000516130 C3orf67Q6ZVT6 689 aa8.24□□□□□ -1.09
RNU6-1278P-201ENST00000516130 L3MBTL3Q96JM7 780 aaPredicted RBP8.23□□□□□ -1.09
RNU6-1278P-201ENST00000516130 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
RNU6-1278P-201ENST00000516130 FAM205CA6NFA0 338 aa8.2□□□□□ -1.1
RNU6-1278P-201ENST00000516130 PYGBP11216 843 aa8.2□□□□□ -1.1
RNU6-1278P-201ENST00000516130 DCAF8Q5TAQ9 597 aa8.17□□□□□ -1.1
RNU6-1278P-201ENST00000516130 MKRN3Q13064 507 aaKnown RBP8.15□□□□□ -1.1
RNU6-1278P-201ENST00000516130 ILDR1Q86SU0 546 aaPredicted RBP8.15□□□□□ -1.1
RNU6-1278P-201ENST00000516130 ZNF467Q7Z7K2 595 aaPredicted RBP8.13□□□□□ -1.11
RNU6-1278P-201ENST00000516130 GOLGA2Q08379 1002 aa8.12□□□□□ -1.11
RNU6-1278P-201ENST00000516130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.12□□□□□ -1.11
RNU6-1278P-201ENST00000516130 HOXB3P14651 431 aaPredicted RBP8.11□□□□□ -1.11
RNU6-1278P-201ENST00000516130 HOXB1P14653 301 aaPredicted RBP8.1□□□□□ -1.11
RNU6-1278P-201ENST00000516130 CHRM1P11229 460 aaPredicted RBP8.08□□□□□ -1.12
RNU6-1278P-201ENST00000516130 RNF166Q96A37 237 aaPredicted RBP8.08□□□□□ -1.12
RNU6-1278P-201ENST00000516130 GSE1Q14687 1217 aa8.06□□□□□ -1.12
RNU6-1278P-201ENST00000516130 PSEN1P49768 467 aa8.05□□□□□ -1.12
RNU6-1278P-201ENST00000516130 ERBB3P21860 1342 aa8.03□□□□□ -1.12
RNU6-1278P-201ENST00000516130 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
RNU6-1278P-201ENST00000516130 ZNF710Q8N1W2 664 aa8.03□□□□□ -1.12
RNU6-1278P-201ENST00000516130 BOLA1Q9Y3E2 137 aa8.03□□□□□ -1.12
RNU6-1278P-201ENST00000516130 DPY19L2Q6NUT2 758 aa8.02□□□□□ -1.13
RNU6-1278P-201ENST00000516130 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
RNU6-1278P-201ENST00000516130 G3V3G9 751 aa7.99□□□□□ -1.13
RNU6-1278P-201ENST00000516130 PDAP1Q13442 181 aaKnown RBP7.99□□□□□ -1.13
RNU6-1278P-201ENST00000516130 PTGER2P43116 358 aa7.98□□□□□ -1.13
RNU6-1278P-201ENST00000516130 RIMBP2O15034 1052 aa7.97□□□□□ -1.13
RNU6-1278P-201ENST00000516130 VARS2Q5ST30 1063 aaKnown RBP7.97□□□□□ -1.13
RNU6-1278P-201ENST00000516130 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
RNU6-1278P-201ENST00000516130 ZNF687Q8N1G0 1237 aa7.96□□□□□ -1.14
RNU6-1278P-201ENST00000516130 ZSWIM6Q9HCJ5 1215 aa7.96□□□□□ -1.14
RNU6-1278P-201ENST00000516130 FKBP8Q14318 412 aa7.94□□□□□ -1.14
RNU6-1278P-201ENST00000516130 CABP2Q9NPB3 220 aa7.94□□□□□ -1.14
RNU6-1278P-201ENST00000516130 KLHL34Q8N239 644 aa7.9□□□□□ -1.14
RNU6-1278P-201ENST00000516130 GPR153Q6NV75 609 aa7.89□□□□□ -1.15
RNU6-1278P-201ENST00000516130 VASPP50552 380 aaPredicted RBP7.88□□□□□ -1.15
RNU6-1278P-201ENST00000516130 TMEM92Q6UXU6 159 aa7.85□□□□□ -1.15
RNU6-1278P-201ENST00000516130 MICALL2Q8IY33 904 aa7.84□□□□□ -1.15
RNU6-1278P-201ENST00000516130 ANKRD13DQ6ZTN6 518 aa7.81□□□□□ -1.16
RNU6-1278P-201ENST00000516130 LSM11P83369 360 aaKnown RBP eCLIP7.8□□□□□ -1.16
RNU6-1278P-201ENST00000516130 EFCAB3Q8N7B9 438 aa7.8□□□□□ -1.16
RNU6-1278P-201ENST00000516130 ZNF316A6NFI3 1004 aaPredicted RBP7.79□□□□□ -1.16
RNU6-1278P-201ENST00000516130 ARSIQ5FYB1 569 aa7.77□□□□□ -1.17
RNU6-1278P-201ENST00000516130 PLA2G2EQ9NZK7 142 aa7.77□□□□□ -1.17
RNU6-1278P-201ENST00000516130 PBX2P40425 430 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms