RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CDAN1Q8IWY9 1227 aa5.99□□□□□ -1.45
SCARNA23-201ENST00000516060 ATMINO43313 823 aaPredicted RBP5.98□□□□□ -1.45
SCARNA23-201ENST00000516060 PAK3O75914 559 aaPredicted RBP5.97□□□□□ -1.45
SCARNA23-201ENST00000516060 SCUBE2Q9NQ36 999 aa5.97□□□□□ -1.45
SCARNA23-201ENST00000516060 MS4A3Q96HJ5 214 aa5.94□□□□□ -1.46
SCARNA23-201ENST00000516060 POTEFA5A3E0 1075 aa5.91□□□□□ -1.46
SCARNA23-201ENST00000516060 ATN1P54259 1190 aaPredicted RBP5.89□□□□□ -1.47
SCARNA23-201ENST00000516060 MMRN1Q13201 1228 aa5.89□□□□□ -1.47
SCARNA23-201ENST00000516060 STAG3Q9UJ98 1225 aa5.88□□□□□ -1.47
SCARNA23-201ENST00000516060 MNX1P50219 401 aaPredicted RBP5.87□□□□□ -1.47
SCARNA23-201ENST00000516060 NPM1P06748 294 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCARNA23-201ENST00000516060 SPNS2Q8IVW8 549 aa5.86□□□□□ -1.47
SCARNA23-201ENST00000516060 ST18O60284 1047 aa5.83□□□□□ -1.48
SCARNA23-201ENST00000516060 BMP2KQ9NSY1 1161 aaPredicted RBP5.81□□□□□ -1.48
SCARNA23-201ENST00000516060 COLQQ9Y215 455 aaPredicted RBP5.81□□□□□ -1.48
SCARNA23-201ENST00000516060 TRPC6Q9Y210 931 aa5.78□□□□□ -1.48
SCARNA23-201ENST00000516060 KIF12Q96FN5 646 aa5.77□□□□□ -1.49
SCARNA23-201ENST00000516060 CCDC61Q9Y6R9 512 aa5.77□□□□□ -1.49
SCARNA23-201ENST00000516060 SEC24BO95487 1268 aa5.76□□□□□ -1.49
SCARNA23-201ENST00000516060 TIE1P35590 1138 aa5.75□□□□□ -1.49
SCARNA23-201ENST00000516060 SLAIN1Q8ND83 568 aa5.75□□□□□ -1.49
SCARNA23-201ENST00000516060 TSPYL2Q9H2G4 693 aaPredicted RBP5.75□□□□□ -1.49
SCARNA23-201ENST00000516060 TTLL13PA6NNM8 815 aa5.71□□□□□ -1.5
SCARNA23-201ENST00000516060 MAP3K13O43283 966 aa5.71□□□□□ -1.5
SCARNA23-201ENST00000516060 TMEM121BQ9BXQ6 578 aaPredicted RBP5.71□□□□□ -1.5
SCARNA23-201ENST00000516060 IER5LQ5T953 404 aa5.7□□□□□ -1.5
SCARNA23-201ENST00000516060 MARVELD3Q96A59 401 aa5.68□□□□□ -1.5
SCARNA23-201ENST00000516060 SPDYE4A6NLX3 237 aa5.67□□□□□ -1.5
SCARNA23-201ENST00000516060 TRIM35Q9UPQ4 493 aa5.67□□□□□ -1.5
SCARNA23-201ENST00000516060 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
SCARNA23-201ENST00000516060 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
SCARNA23-201ENST00000516060 SNPHO15079 494 aa5.63□□□□□ -1.51
SCARNA23-201ENST00000516060 POTEB3A0JP26 581 aa5.61□□□□□ -1.51
SCARNA23-201ENST00000516060 POTEBQ6S5H4 581 aa5.61□□□□□ -1.51
SCARNA23-201ENST00000516060 PLCG2P16885 1265 aa5.6□□□□□ -1.51
SCARNA23-201ENST00000516060 IRX5P78411 483 aaPredicted RBP5.59□□□□□ -1.51
SCARNA23-201ENST00000516060 RASEFQ8IZ41 740 aa5.59□□□□□ -1.51
SCARNA23-201ENST00000516060 EMP3P54852 163 aa5.58□□□□□ -1.52
SCARNA23-201ENST00000516060 SGIP1Q9BQI5 828 aa5.58□□□□□ -1.52
SCARNA23-201ENST00000516060 HS3ST6Q96QI5 342 aa5.57□□□□□ -1.52
SCARNA23-201ENST00000516060 PCDHB13Q9Y5F0 798 aa5.57□□□□□ -1.52
SCARNA23-201ENST00000516060 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.56□□□□□ -1.52
SCARNA23-201ENST00000516060 TMEM106CQ9BVX2 250 aa5.55□□□□□ -1.52
SCARNA23-201ENST00000516060 FAM205CA6NFA0 338 aa5.54□□□□□ -1.52
SCARNA23-201ENST00000516060 IFNL1Q8IU54 200 aa5.54□□□□□ -1.52
SCARNA23-201ENST00000516060 OCEL1Q9H607 264 aa5.53□□□□□ -1.52
SCARNA23-201ENST00000516060 RNF166Q96A37 237 aaPredicted RBP5.49□□□□□ -1.53
SCARNA23-201ENST00000516060 PROM2Q8N271 834 aa5.48□□□□□ -1.53
SCARNA23-201ENST00000516060 PLEKHG5O94827 1062 aa5.45□□□□□ -1.54
SCARNA23-201ENST00000516060 MIER1Q8N108 512 aa5.45□□□□□ -1.54
SCARNA23-201ENST00000516060 C3orf67Q6ZVT6 689 aa5.44□□□□□ -1.54
SCARNA23-201ENST00000516060 NUBP1P53384 320 aa5.43□□□□□ -1.54
SCARNA23-201ENST00000516060 PDCD7Q8N8D1 485 aaKnown RBP5.43□□□□□ -1.54
SCARNA23-201ENST00000516060 MYT1LQ9UL68 1186 aa5.43□□□□□ -1.54
SCARNA23-201ENST00000516060 L3MBTL3Q96JM7 780 aaPredicted RBP5.4□□□□□ -1.54
SCARNA23-201ENST00000516060 HOXB3P14651 431 aaPredicted RBP5.39□□□□□ -1.55
SCARNA23-201ENST00000516060 HOXB1P14653 301 aaPredicted RBP5.38□□□□□ -1.55
SCARNA23-201ENST00000516060 CSRNP3Q8WYN3 585 aa5.37□□□□□ -1.55
SCARNA23-201ENST00000516060 ERBB3P21860 1342 aa5.37□□□□□ -1.55
SCARNA23-201ENST00000516060 FAM212AQ96EL1 285 aa5.36□□□□□ -1.55
SCARNA23-201ENST00000516060 PCDHB8Q9UN66 801 aa5.35□□□□□ -1.55
SCARNA23-201ENST00000516060 PLCD3Q8N3E9 789 aa5.34□□□□□ -1.55
SCARNA23-201ENST00000516060 VARS2Q5ST30 1063 aaKnown RBP5.33□□□□□ -1.56
SCARNA23-201ENST00000516060 ZNF710Q8N1W2 664 aa5.33□□□□□ -1.56
SCARNA23-201ENST00000516060 PYGBP11216 843 aa5.32□□□□□ -1.56
SCARNA23-201ENST00000516060 PTGER2P43116 358 aa5.32□□□□□ -1.56
SCARNA23-201ENST00000516060 ZBTB47Q9UFB7 747 aaPredicted RBP5.32□□□□□ -1.56
SCARNA23-201ENST00000516060 MKRN3Q13064 507 aaKnown RBP5.31□□□□□ -1.56
SCARNA23-201ENST00000516060 ZNF687Q8N1G0 1237 aa5.31□□□□□ -1.56
SCARNA23-201ENST00000516060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCARNA23-201ENST00000516060 ILDR1Q86SU0 546 aaPredicted RBP5.3□□□□□ -1.56
SCARNA23-201ENST00000516060 GOLGA2Q08379 1002 aa5.29□□□□□ -1.56
SCARNA23-201ENST00000516060 DOK7Q18PE1 504 aa5.29□□□□□ -1.56
SCARNA23-201ENST00000516060 DPY19L2Q6NUT2 758 aa5.29□□□□□ -1.56
SCARNA23-201ENST00000516060 PLA2G2EQ9NZK7 142 aa5.28□□□□□ -1.56
SCARNA23-201ENST00000516060 DCAF8Q5TAQ9 597 aa5.27□□□□□ -1.57
SCARNA23-201ENST00000516060 ANKRD13DQ6ZTN6 518 aa5.25□□□□□ -1.57
SCARNA23-201ENST00000516060 BOLA1Q9Y3E2 137 aa5.25□□□□□ -1.57
SCARNA23-201ENST00000516060 RIMBP2O15034 1052 aa5.24□□□□□ -1.57
SCARNA23-201ENST00000516060 ZNF467Q7Z7K2 595 aaPredicted RBP5.22□□□□□ -1.57
SCARNA23-201ENST00000516060 ZSWIM6Q9HCJ5 1215 aa5.22□□□□□ -1.57
SCARNA23-201ENST00000516060 G3V3G9 751 aa5.21□□□□□ -1.58
SCARNA23-201ENST00000516060 GPR153Q6NV75 609 aa5.21□□□□□ -1.58
SCARNA23-201ENST00000516060 PSEN1P49768 467 aa5.2□□□□□ -1.58
SCARNA23-201ENST00000516060 LSM11P83369 360 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCARNA23-201ENST00000516060 HCSTQ9UBK5 93 aa5.19□□□□□ -1.58
SCARNA23-201ENST00000516060 TMEM92Q6UXU6 159 aa5.16□□□□□ -1.58
SCARNA23-201ENST00000516060 CHRM1P11229 460 aaPredicted RBP5.15□□□□□ -1.59
SCARNA23-201ENST00000516060 ZNF316A6NFI3 1004 aaPredicted RBP5.14□□□□□ -1.59
SCARNA23-201ENST00000516060 ARSIQ5FYB1 569 aa5.14□□□□□ -1.59
SCARNA23-201ENST00000516060 CABP2Q9NPB3 220 aa5.14□□□□□ -1.59
SCARNA23-201ENST00000516060 PDAP1Q13442 181 aaKnown RBP5.12□□□□□ -1.59
SCARNA23-201ENST00000516060 POTEEQ6S8J3 1075 aa5.12□□□□□ -1.59
SCARNA23-201ENST00000516060 IRX2Q9BZI1 471 aaPredicted RBP5.12□□□□□ -1.59
SCARNA23-201ENST00000516060 GSE1Q14687 1217 aa5.11□□□□□ -1.59
SCARNA23-201ENST00000516060 KHSRPQ92945 711 aaKnown RBP eCLIP5.11□□□□□ -1.59
SCARNA23-201ENST00000516060 RGS20O76081 388 aa5.1□□□□□ -1.59
SCARNA23-201ENST00000516060 PBX2P40425 430 aa5.1□□□□□ -1.59
SCARNA23-201ENST00000516060 AXIN2Q9Y2T1 843 aa5.09□□□□□ -1.59
SCARNA23-201ENST00000516060 MICALL2Q8IY33 904 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms