RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
RNU4-29P-201ENST00000515943 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
RNU4-29P-201ENST00000515943 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
RNU4-29P-201ENST00000515943 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
RNU4-29P-201ENST00000515943 GABBR2O75899 941 aa9.42□□□□□ -0.9
RNU4-29P-201ENST00000515943 GSE1Q14687 1217 aa9.42□□□□□ -0.9
RNU4-29P-201ENST00000515943 CLCN6P51797 869 aa9.41□□□□□ -0.9
RNU4-29P-201ENST00000515943 LHX8Q68G74 356 aa9.39□□□□□ -0.91
RNU4-29P-201ENST00000515943 KIF12Q96FN5 646 aa9.39□□□□□ -0.91
RNU4-29P-201ENST00000515943 CIZ1Q9ULV3 898 aaPredicted RBP9.38□□□□□ -0.91
RNU4-29P-201ENST00000515943 MAP3K13O43283 966 aa9.35□□□□□ -0.91
RNU4-29P-201ENST00000515943 GALR2O43603 387 aaPredicted RBP9.35□□□□□ -0.91
RNU4-29P-201ENST00000515943 MS4A3Q96HJ5 214 aa9.35□□□□□ -0.91
RNU4-29P-201ENST00000515943 PYGBP11216 843 aa9.34□□□□□ -0.91
RNU4-29P-201ENST00000515943 CHRM1P11229 460 aaPredicted RBP9.32□□□□□ -0.92
RNU4-29P-201ENST00000515943 SGIP1Q9BQI5 828 aa9.32□□□□□ -0.92
RNU4-29P-201ENST00000515943 TRIM41Q8WV44 630 aa9.31□□□□□ -0.92
RNU4-29P-201ENST00000515943 PCDHB13Q9Y5F0 798 aa9.3□□□□□ -0.92
RNU4-29P-201ENST00000515943 IFNL1Q8IU54 200 aa9.28□□□□□ -0.92
RNU4-29P-201ENST00000515943 PKD2Q13563 968 aa9.26□□□□□ -0.93
RNU4-29P-201ENST00000515943 TRPC6Q9Y210 931 aa9.26□□□□□ -0.93
RNU4-29P-201ENST00000515943 POTEIP0CG38 1075 aa9.24□□□□□ -0.93
RNU4-29P-201ENST00000515943 ZNF467Q7Z7K2 595 aaPredicted RBP9.24□□□□□ -0.93
RNU4-29P-201ENST00000515943 DCBLD2Q96PD2 775 aa9.23□□□□□ -0.93
RNU4-29P-201ENST00000515943 PCDHB8Q9UN66 801 aa9.23□□□□□ -0.93
RNU4-29P-201ENST00000515943 ECM2O94769 699 aaPredicted RBP9.21□□□□□ -0.94
RNU4-29P-201ENST00000515943 TIE1P35590 1138 aa9.21□□□□□ -0.94
RNU4-29P-201ENST00000515943 BMP2KQ9NSY1 1161 aaPredicted RBP9.21□□□□□ -0.94
RNU4-29P-201ENST00000515943 ASTLQ6HA08 431 aaPredicted RBP9.2□□□□□ -0.94
RNU4-29P-201ENST00000515943 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
RNU4-29P-201ENST00000515943 ATMINO43313 823 aaPredicted RBP9.18□□□□□ -0.94
RNU4-29P-201ENST00000515943 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
RNU4-29P-201ENST00000515943 RIOK3O14730 519 aaKnown RBP9.16□□□□□ -0.94
RNU4-29P-201ENST00000515943 ATN1P54259 1190 aaPredicted RBP9.15□□□□□ -0.94
RNU4-29P-201ENST00000515943 PDAP1Q13442 181 aaKnown RBP9.15□□□□□ -0.94
RNU4-29P-201ENST00000515943 TMEM106CQ9BVX2 250 aa9.15□□□□□ -0.94
RNU4-29P-201ENST00000515943 RGL2O15211 777 aa9.14□□□□□ -0.95
RNU4-29P-201ENST00000515943 PSEN1P49768 467 aa9.14□□□□□ -0.95
RNU4-29P-201ENST00000515943 PELP1Q8IZL8 1130 aaKnown RBP9.14□□□□□ -0.95
RNU4-29P-201ENST00000515943 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
RNU4-29P-201ENST00000515943 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
RNU4-29P-201ENST00000515943 TRIM35Q9UPQ4 493 aa9.1□□□□□ -0.95
RNU4-29P-201ENST00000515943 SLC39A7Q92504 469 aa9.08□□□□□ -0.96
RNU4-29P-201ENST00000515943 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
RNU4-29P-201ENST00000515943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.07□□□□□ -0.96
RNU4-29P-201ENST00000515943 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
RNU4-29P-201ENST00000515943 TAOK2Q9UL54 1235 aa9.06□□□□□ -0.96
RNU4-29P-201ENST00000515943 C7P10643 843 aa9.05□□□□□ -0.96
RNU4-29P-201ENST00000515943 METRNQ9UJH8 293 aa9.05□□□□□ -0.96
RNU4-29P-201ENST00000515943 IER5LQ5T953 404 aa9.04□□□□□ -0.96
RNU4-29P-201ENST00000515943 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
RNU4-29P-201ENST00000515943 POTEFA5A3E0 1075 aa9□□□□□ -0.97
RNU4-29P-201ENST00000515943 GOLGA2Q08379 1002 aa9□□□□□ -0.97
RNU4-29P-201ENST00000515943 BCL11BQ9C0K0 894 aaPredicted RBP9□□□□□ -0.97
RNU4-29P-201ENST00000515943 STK25O00506 426 aa8.99□□□□□ -0.97
RNU4-29P-201ENST00000515943 IRX5P78411 483 aaPredicted RBP8.99□□□□□ -0.97
RNU4-29P-201ENST00000515943 MKRN3Q13064 507 aaKnown RBP8.98□□□□□ -0.97
RNU4-29P-201ENST00000515943 COLQQ9Y215 455 aaPredicted RBP8.98□□□□□ -0.97
RNU4-29P-201ENST00000515943 STK24Q9Y6E0 443 aa8.98□□□□□ -0.97
RNU4-29P-201ENST00000515943 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
RNU4-29P-201ENST00000515943 EFCAB3Q8N7B9 438 aa8.96□□□□□ -0.98
RNU4-29P-201ENST00000515943 SEC24BO95487 1268 aa8.95□□□□□ -0.98
RNU4-29P-201ENST00000515943 POTEB2H3BUK9 544 aa8.94□□□□□ -0.98
RNU4-29P-201ENST00000515943 PLCG2P16885 1265 aa8.94□□□□□ -0.98
RNU4-29P-201ENST00000515943 ILDR1Q86SU0 546 aaPredicted RBP8.94□□□□□ -0.98
RNU4-29P-201ENST00000515943 PDCD7Q8N8D1 485 aaKnown RBP8.93□□□□□ -0.98
RNU4-29P-201ENST00000515943 OCEL1Q9H607 264 aa8.93□□□□□ -0.98
RNU4-29P-201ENST00000515943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.93□□□□□ -0.98
RNU4-29P-201ENST00000515943 CHGAP10645 457 aaKnown RBP8.92□□□□□ -0.98
RNU4-29P-201ENST00000515943 DCAF8L2P0C7V8 631 aa8.91□□□□□ -0.98
RNU4-29P-201ENST00000515943 SOX12O15370 315 aa8.9□□□□□ -0.98
RNU4-29P-201ENST00000515943 POTEMA6NI47 508 aa8.89□□□□□ -0.99
RNU4-29P-201ENST00000515943 POTEJP0CG39 1038 aa8.89□□□□□ -0.99
RNU4-29P-201ENST00000515943 DNAJC5Q9H3Z4 198 aa8.89□□□□□ -0.99
RNU4-29P-201ENST00000515943 PHF8Q9UPP1 1060 aa8.88□□□□□ -0.99
RNU4-29P-201ENST00000515943 MFRPQ9BY79 579 aa8.87□□□□□ -0.99
RNU4-29P-201ENST00000515943 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
RNU4-29P-201ENST00000515943 MS4A4AQ96JQ5 239 aa8.86□□□□□ -0.99
RNU4-29P-201ENST00000515943 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
RNU4-29P-201ENST00000515943 NLRP6P59044 892 aa8.85□□□□□ -0.99
RNU4-29P-201ENST00000515943 NKX1-1Q15270 411 aaPredicted RBP8.84□□□□□ -0.99
RNU4-29P-201ENST00000515943 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
RNU4-29P-201ENST00000515943 POTEGQ6S5H5 508 aa8.83□□□□□ -1
RNU4-29P-201ENST00000515943 MAMSTRQ6ZN01 415 aa8.81□□□□□ -1
RNU4-29P-201ENST00000515943 OTUD5Q96G74 571 aa8.81□□□□□ -1
RNU4-29P-201ENST00000515943 L3MBTL3Q96JM7 780 aaPredicted RBP8.81□□□□□ -1
RNU4-29P-201ENST00000515943 SCUBE2Q9NQ36 999 aa8.79□□□□□ -1
RNU4-29P-201ENST00000515943 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
RNU4-29P-201ENST00000515943 TMEM121BQ9BXQ6 578 aaPredicted RBP8.77□□□□□ -1.01
RNU4-29P-201ENST00000515943 MICALL2Q8IY33 904 aa8.75□□□□□ -1.01
RNU4-29P-201ENST00000515943 G3V3G9 751 aa8.74□□□□□ -1.01
RNU4-29P-201ENST00000515943 C3orf67Q6ZVT6 689 aa8.74□□□□□ -1.01
RNU4-29P-201ENST00000515943 BBXQ8WY36 941 aaPredicted RBP8.74□□□□□ -1.01
RNU4-29P-201ENST00000515943 RYDENQ9NUL5 291 aaKnown RBP8.74□□□□□ -1.01
RNU4-29P-201ENST00000515943 PPP1R37O75864 691 aa8.73□□□□□ -1.01
RNU4-29P-201ENST00000515943 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.73□□□□□ -1.01
RNU4-29P-201ENST00000515943 GTPBP6O43824 516 aaPredicted RBP8.72□□□□□ -1.01
RNU4-29P-201ENST00000515943 SLAIN1Q8ND83 568 aa8.69□□□□□ -1.02
RNU4-29P-201ENST00000515943 TMEM92Q6UXU6 159 aa8.66□□□□□ -1.02
RNU4-29P-201ENST00000515943 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms