RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 LHX8Q68G74 356 aa7.27□□□□□ -1.25
SNORA40.9-201ENST00000515895 NUBP1P53384 320 aa7.25□□□□□ -1.25
SNORA40.9-201ENST00000515895 FBXO3Q9UK99 471 aa7.25□□□□□ -1.25
SNORA40.9-201ENST00000515895 KIF12Q96FN5 646 aa7.24□□□□□ -1.25
SNORA40.9-201ENST00000515895 ZBTB47Q9UFB7 747 aaPredicted RBP7.24□□□□□ -1.25
SNORA40.9-201ENST00000515895 MAP3K13O43283 966 aa7.22□□□□□ -1.25
SNORA40.9-201ENST00000515895 PELP1Q8IZL8 1130 aaKnown RBP7.22□□□□□ -1.25
SNORA40.9-201ENST00000515895 TRPC6Q9Y210 931 aa7.22□□□□□ -1.25
SNORA40.9-201ENST00000515895 VASPP50552 380 aaPredicted RBP7.21□□□□□ -1.26
SNORA40.9-201ENST00000515895 ATMINO43313 823 aaPredicted RBP7.19□□□□□ -1.26
SNORA40.9-201ENST00000515895 ASTLQ6HA08 431 aaPredicted RBP7.18□□□□□ -1.26
SNORA40.9-201ENST00000515895 FAM212AQ96EL1 285 aa7.18□□□□□ -1.26
SNORA40.9-201ENST00000515895 KLHL34Q8N239 644 aa7.17□□□□□ -1.26
SNORA40.9-201ENST00000515895 POTEB2H3BUK9 544 aa7.16□□□□□ -1.26
SNORA40.9-201ENST00000515895 ATN1P54259 1190 aaPredicted RBP7.16□□□□□ -1.26
SNORA40.9-201ENST00000515895 BMP2KQ9NSY1 1161 aaPredicted RBP7.16□□□□□ -1.26
SNORA40.9-201ENST00000515895 DCAF8Q5TAQ9 597 aa7.15□□□□□ -1.26
SNORA40.9-201ENST00000515895 PCDHB13Q9Y5F0 798 aa7.15□□□□□ -1.26
SNORA40.9-201ENST00000515895 METRNQ9UJH8 293 aa7.14□□□□□ -1.27
SNORA40.9-201ENST00000515895 PYGBP11216 843 aa7.13□□□□□ -1.27
SNORA40.9-201ENST00000515895 IFNL1Q8IU54 200 aa7.13□□□□□ -1.27
SNORA40.9-201ENST00000515895 SLC39A7Q92504 469 aa7.12□□□□□ -1.27
SNORA40.9-201ENST00000515895 TTLL13PA6NNM8 815 aa7.11□□□□□ -1.27
SNORA40.9-201ENST00000515895 TIE1P35590 1138 aa7.11□□□□□ -1.27
SNORA40.9-201ENST00000515895 IFNLR1Q8IU57 520 aaPredicted RBP7.11□□□□□ -1.27
SNORA40.9-201ENST00000515895 C7P10643 843 aa7.09□□□□□ -1.27
SNORA40.9-201ENST00000515895 OTUD5Q96G74 571 aa7.09□□□□□ -1.27
SNORA40.9-201ENST00000515895 SGIP1Q9BQI5 828 aa7.09□□□□□ -1.27
SNORA40.9-201ENST00000515895 POTEFA5A3E0 1075 aa7.07□□□□□ -1.28
SNORA40.9-201ENST00000515895 POTEJP0CG39 1038 aa7.07□□□□□ -1.28
SNORA40.9-201ENST00000515895 TRIM35Q9UPQ4 493 aa7.07□□□□□ -1.28
SNORA40.9-201ENST00000515895 PCDHB8Q9UN66 801 aa7.06□□□□□ -1.28
SNORA40.9-201ENST00000515895 GSE1Q14687 1217 aa7.05□□□□□ -1.28
SNORA40.9-201ENST00000515895 TMEM106CQ9BVX2 250 aa7.05□□□□□ -1.28
SNORA40.9-201ENST00000515895 SPOCK2Q92563 424 aa7.04□□□□□ -1.28
SNORA40.9-201ENST00000515895 COLQQ9Y215 455 aaPredicted RBP7.04□□□□□ -1.28
SNORA40.9-201ENST00000515895 CIZ1Q9ULV3 898 aaPredicted RBP7.02□□□□□ -1.29
SNORA40.9-201ENST00000515895 SEC24BO95487 1268 aa7.01□□□□□ -1.29
SNORA40.9-201ENST00000515895 IER5LQ5T953 404 aa6.98□□□□□ -1.29
SNORA40.9-201ENST00000515895 ZNF467Q7Z7K2 595 aaPredicted RBP6.97□□□□□ -1.29
SNORA40.9-201ENST00000515895 CHRM1P11229 460 aaPredicted RBP6.96□□□□□ -1.3
SNORA40.9-201ENST00000515895 IRX5P78411 483 aaPredicted RBP6.95□□□□□ -1.3
SNORA40.9-201ENST00000515895 MAMSTRQ6ZN01 415 aa6.95□□□□□ -1.3
SNORA40.9-201ENST00000515895 SCUBE2Q9NQ36 999 aa6.95□□□□□ -1.3
SNORA40.9-201ENST00000515895 PLCG2P16885 1265 aa6.94□□□□□ -1.3
SNORA40.9-201ENST00000515895 PSEN1P49768 467 aa6.94□□□□□ -1.3
SNORA40.9-201ENST00000515895 PDAP1Q13442 181 aaKnown RBP6.9□□□□□ -1.3
SNORA40.9-201ENST00000515895 OCEL1Q9H607 264 aa6.9□□□□□ -1.3
SNORA40.9-201ENST00000515895 GOLGA2Q08379 1002 aa6.89□□□□□ -1.31
SNORA40.9-201ENST00000515895 MKRN3Q13064 507 aaKnown RBP6.88□□□□□ -1.31
SNORA40.9-201ENST00000515895 PDCD7Q8N8D1 485 aaKnown RBP6.87□□□□□ -1.31
SNORA40.9-201ENST00000515895 CABP2Q9NPB3 220 aa6.87□□□□□ -1.31
SNORA40.9-201ENST00000515895 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
SNORA40.9-201ENST00000515895 FAM163AQ96GL9 167 aaPredicted RBP6.86□□□□□ -1.31
SNORA40.9-201ENST00000515895 POTEMA6NI47 508 aa6.85□□□□□ -1.31
SNORA40.9-201ENST00000515895 SLAIN1Q8ND83 568 aa6.85□□□□□ -1.31
SNORA40.9-201ENST00000515895 TRIM41Q8WV44 630 aa6.85□□□□□ -1.31
SNORA40.9-201ENST00000515895 RNF25Q96BH1 459 aaPredicted RBP6.85□□□□□ -1.31
SNORA40.9-201ENST00000515895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNORA40.9-201ENST00000515895 POTEGQ6S5H5 508 aa6.84□□□□□ -1.31
SNORA40.9-201ENST00000515895 DPY19L2Q6NUT2 758 aa6.82□□□□□ -1.32
SNORA40.9-201ENST00000515895 RIOK3O14730 519 aaKnown RBP6.81□□□□□ -1.32
SNORA40.9-201ENST00000515895 EFCAB3Q8N7B9 438 aa6.8□□□□□ -1.32
SNORA40.9-201ENST00000515895 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.8□□□□□ -1.32
SNORA40.9-201ENST00000515895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.79□□□□□ -1.32
SNORA40.9-201ENST00000515895 ILDR1Q86SU0 546 aaPredicted RBP6.79□□□□□ -1.32
SNORA40.9-201ENST00000515895 ZFP91Q96JP5 570 aaPredicted RBP6.79□□□□□ -1.32
SNORA40.9-201ENST00000515895 L3MBTL3Q96JM7 780 aaPredicted RBP6.78□□□□□ -1.32
SNORA40.9-201ENST00000515895 C3orf67Q6ZVT6 689 aa6.77□□□□□ -1.33
SNORA40.9-201ENST00000515895 VGFO15240 615 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.9-201ENST00000515895 ST18O60284 1047 aa6.75□□□□□ -1.33
SNORA40.9-201ENST00000515895 ECM2O94769 699 aaPredicted RBP6.75□□□□□ -1.33
SNORA40.9-201ENST00000515895 PKD2Q13563 968 aa6.75□□□□□ -1.33
SNORA40.9-201ENST00000515895 PLSCR2Q9NRY7 297 aa6.75□□□□□ -1.33
SNORA40.9-201ENST00000515895 BOLA1Q9Y3E2 137 aa6.74□□□□□ -1.33
SNORA40.9-201ENST00000515895 RGL2O15211 777 aa6.72□□□□□ -1.33
SNORA40.9-201ENST00000515895 BCL11BQ9C0K0 894 aaPredicted RBP6.72□□□□□ -1.33
SNORA40.9-201ENST00000515895 PHF8Q9UPP1 1060 aa6.72□□□□□ -1.33
SNORA40.9-201ENST00000515895 G3V3G9 751 aa6.71□□□□□ -1.34
SNORA40.9-201ENST00000515895 MS4A4AQ96JQ5 239 aa6.71□□□□□ -1.34
SNORA40.9-201ENST00000515895 STK24Q9Y6E0 443 aa6.71□□□□□ -1.34
SNORA40.9-201ENST00000515895 STK25O00506 426 aa6.68□□□□□ -1.34
SNORA40.9-201ENST00000515895 SOX12O15370 315 aa6.68□□□□□ -1.34
SNORA40.9-201ENST00000515895 MARVELD3Q96A59 401 aa6.68□□□□□ -1.34
SNORA40.9-201ENST00000515895 TMEM121BQ9BXQ6 578 aaPredicted RBP6.68□□□□□ -1.34
SNORA40.9-201ENST00000515895 SNPHO15079 494 aa6.67□□□□□ -1.34
SNORA40.9-201ENST00000515895 MICALL2Q8IY33 904 aa6.67□□□□□ -1.34
SNORA40.9-201ENST00000515895 TAOK2Q9UL54 1235 aa6.66□□□□□ -1.34
SNORA40.9-201ENST00000515895 TMEM92Q6UXU6 159 aa6.65□□□□□ -1.34
SNORA40.9-201ENST00000515895 CDAN1Q8IWY9 1227 aa6.65□□□□□ -1.34
SNORA40.9-201ENST00000515895 FBXO22Q8NEZ5 403 aa6.65□□□□□ -1.34
SNORA40.9-201ENST00000515895 MFRPQ9BY79 579 aa6.65□□□□□ -1.34
SNORA40.9-201ENST00000515895 PCDH10Q9P2E7 1040 aa6.64□□□□□ -1.35
SNORA40.9-201ENST00000515895 HOXB3P14651 431 aaPredicted RBP6.63□□□□□ -1.35
SNORA40.9-201ENST00000515895 NLRP6P59044 892 aa6.63□□□□□ -1.35
SNORA40.9-201ENST00000515895 EMP3P54852 163 aa6.61□□□□□ -1.35
SNORA40.9-201ENST00000515895 POTEB3A0JP26 581 aa6.58□□□□□ -1.36
SNORA40.9-201ENST00000515895 FAM205CA6NFA0 338 aa6.58□□□□□ -1.36
SNORA40.9-201ENST00000515895 POTEBQ6S5H4 581 aa6.58□□□□□ -1.36
SNORA40.9-201ENST00000515895 ZNF710Q8N1W2 664 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms