RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 ANP32AP39687 249 aaKnown RBP22.16■■□□□ 1.14
CDH6-205ENST00000514738 BBXQ8WY36 941 aaPredicted RBP22.15■■□□□ 1.14
CDH6-205ENST00000514738 HSP90AA1P07900 732 aaKnown RBP22.15■■□□□ 1.14
CDH6-205ENST00000514738 GSE1Q14687 1217 aa22.13■■□□□ 1.13
CDH6-205ENST00000514738 NAP1L5Q96NT1 182 aaPredicted RBP22.13■■□□□ 1.13
CDH6-205ENST00000514738 DHX37Q8IY37 1157 aaKnown RBP22.12■■□□□ 1.13
CDH6-205ENST00000514738 CHMP4BQ9H444 224 aaKnown RBP22.12■■□□□ 1.13
CDH6-205ENST00000514738 ZNF326Q5BKZ1 582 aaKnown RBP22.12■■□□□ 1.13
CDH6-205ENST00000514738 RGS3P49796 1198 aa22.07■■□□□ 1.12
CDH6-205ENST00000514738 CALD1Q05682 793 aaKnown RBP22.06■■□□□ 1.12
CDH6-205ENST00000514738 BRD2P25440 801 aaKnown RBP22.06■■□□□ 1.12
CDH6-205ENST00000514738 GTF2E1P29083 439 aaPredicted RBP22.05■■□□□ 1.12
CDH6-205ENST00000514738 CHMP4AQ9BY43 222 aa22.05■■□□□ 1.12
CDH6-205ENST00000514738 IRX6P78412 446 aaPredicted RBP22■■□□□ 1.11
CDH6-205ENST00000514738 IPO4Q8TEX9 1081 aaKnown RBP22■■□□□ 1.11
CDH6-205ENST00000514738 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
CDH6-205ENST00000514738 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
CDH6-205ENST00000514738 PPP4R2Q9NY27 417 aa21.98■■□□□ 1.11
CDH6-205ENST00000514738 TRIM52Q96A61 297 aa21.97■■□□□ 1.11
CDH6-205ENST00000514738 PPM1GO15355 546 aaPredicted RBP21.94■■□□□ 1.1
CDH6-205ENST00000514738 FRAT1Q92837 279 aaPredicted RBP21.94■■□□□ 1.1
CDH6-205ENST00000514738 STAC3Q96MF2 364 aa21.93■■□□□ 1.1
CDH6-205ENST00000514738 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
CDH6-205ENST00000514738 RRAGDQ9NQL2 400 aaPredicted RBP21.92■■□□□ 1.1
CDH6-205ENST00000514738 CENPJQ9HC77 1338 aaPredicted RBP21.9■■□□□ 1.1
CDH6-205ENST00000514738 DCAF11Q8TEB1 546 aa21.88■■□□□ 1.09
CDH6-205ENST00000514738 SAMD1Q6SPF0 538 aaPredicted RBP21.81■■□□□ 1.08
CDH6-205ENST00000514738 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
CDH6-205ENST00000514738 PDCL3Q9H2J4 239 aa21.81■■□□□ 1.08
CDH6-205ENST00000514738 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
CDH6-205ENST00000514738 HOMEZQ8IX15 550 aa21.8■■□□□ 1.08
CDH6-205ENST00000514738 ZFP91Q96JP5 570 aaPredicted RBP21.79■■□□□ 1.08
CDH6-205ENST00000514738 PNNQ9H307 717 aaKnown RBP21.79■■□□□ 1.08
CDH6-205ENST00000514738 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
CDH6-205ENST00000514738 TULP1O00294 542 aaPredicted RBP21.74■■□□□ 1.07
CDH6-205ENST00000514738 FOXD1Q16676 465 aa21.74■■□□□ 1.07
CDH6-205ENST00000514738 HAP1P54257 671 aaPredicted RBP21.72■■□□□ 1.07
CDH6-205ENST00000514738 FTSJ3Q8IY81 847 aaKnown RBP21.71■■□□□ 1.07
CDH6-205ENST00000514738 NFKBIBQ15653 356 aa21.67■■□□□ 1.06
CDH6-205ENST00000514738 TEX2Q8IWB9 1127 aa21.65■■□□□ 1.06
CDH6-205ENST00000514738 CCER2I3L3R5 266 aa21.64■■□□□ 1.06
CDH6-205ENST00000514738 CLCN1P35523 988 aa21.63■■□□□ 1.05
CDH6-205ENST00000514738 SECISBP2LQ93073 1101 aaKnown RBP21.63■■□□□ 1.05
CDH6-205ENST00000514738 PLCD3Q8N3E9 789 aa21.62■■□□□ 1.05
CDH6-205ENST00000514738 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
CDH6-205ENST00000514738 CHRM1P11229 460 aaPredicted RBP21.6■■□□□ 1.05
CDH6-205ENST00000514738 NCLP19338 710 aaKnown RBP21.6■■□□□ 1.05
CDH6-205ENST00000514738 HNRNPUL2Q1KMD3 747 aaKnown RBP21.6■■□□□ 1.05
CDH6-205ENST00000514738 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
CDH6-205ENST00000514738 ZNF830Q96NB3 372 aaPredicted RBP21.59■■□□□ 1.05
CDH6-205ENST00000514738 EEA1Q15075 1411 aa21.55■■□□□ 1.04
CDH6-205ENST00000514738 DDRGK1Q96HY6 314 aa21.55■■□□□ 1.04
CDH6-205ENST00000514738 TMEM51Q9NW97 253 aa21.55■■□□□ 1.04
CDH6-205ENST00000514738 ARID4BQ4LE39 1312 aaPredicted RBP21.55■■□□□ 1.04
CDH6-205ENST00000514738 ZHX1Q9UKY1 873 aaPredicted RBP21.54■■□□□ 1.04
CDH6-205ENST00000514738 SMAP1Q8IYB5 467 aaPredicted RBP21.51■■□□□ 1.03
CDH6-205ENST00000514738 DDX10Q13206 875 aaKnown RBP21.51■■□□□ 1.03
CDH6-205ENST00000514738 TPM2P07951 284 aa21.5■■□□□ 1.03
CDH6-205ENST00000514738 BCCIPQ9P287 314 aaKnown RBP eCLIP21.5■■□□□ 1.03
CDH6-205ENST00000514738 NACADO15069 1562 aa21.48■■□□□ 1.03
CDH6-205ENST00000514738 VGLL3A8MV65 326 aa21.46■■□□□ 1.03
CDH6-205ENST00000514738 HNRNPUQ00839 825 aaKnown RBP eCLIP21.44■■□□□ 1.02
CDH6-205ENST00000514738 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
CDH6-205ENST00000514738 ANP32CO43423 234 aa21.41■■□□□ 1.02
CDH6-205ENST00000514738 CNKSR2Q8WXI2 1034 aa21.39■■□□□ 1.01
CDH6-205ENST00000514738 RNF216Q9NWF9 866 aaPredicted RBP21.38■■□□□ 1.01
CDH6-205ENST00000514738 L1TD1Q5T7N2 865 aaKnown RBP21.37■■□□□ 1.01
CDH6-205ENST00000514738 UTP14CQ5TAP6 766 aaKnown RBP21.37■■□□□ 1.01
CDH6-205ENST00000514738 C14orf37Q86TY3 774 aa21.37■■□□□ 1.01
CDH6-205ENST00000514738 PPP4R3BQ5MIZ7 849 aa21.36■■□□□ 1.01
CDH6-205ENST00000514738 PPP1R15AO75807 674 aaPredicted RBP21.35■■□□□ 1.01
CDH6-205ENST00000514738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.33■■□□□ 1
CDH6-205ENST00000514738 FRAT2O75474 233 aaPredicted RBP21.32■■□□□ 1
CDH6-205ENST00000514738 DHX57Q6P158 1386 aaKnown RBP21.32■■□□□ 1
CDH6-205ENST00000514738 MAP7D2Q96T17 732 aa21.31■■□□□ 1
CDH6-205ENST00000514738 DMTNQ08495 405 aa21.3■■□□□ 1
CDH6-205ENST00000514738 RGS22Q8NE09 1264 aa21.29■■□□□ 1
CDH6-205ENST00000514738 NCAPD3P42695 1498 aa21.28■■□□□ 1
CDH6-205ENST00000514738 CNPY4Q8N129 248 aa21.27■■□□□ 1
CDH6-205ENST00000514738 ANP32BQ92688 251 aaKnown RBP21.27■■□□□ 1
CDH6-205ENST00000514738 SIN3AQ96ST3 1273 aa21.27■■□□□ 1
CDH6-205ENST00000514738 KCNG1Q9UIX4 513 aa21.26■□□□□ 0.99
CDH6-205ENST00000514738 PDE4AP27815 886 aa21.25■□□□□ 0.99
CDH6-205ENST00000514738 PRDM10Q9NQV6 1147 aa21.24■□□□□ 0.99
CDH6-205ENST00000514738 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
CDH6-205ENST00000514738 HSP90B1P14625 803 aaKnown RBP21.23■□□□□ 0.99
CDH6-205ENST00000514738 BACH2Q9BYV9 841 aa21.21■□□□□ 0.99
CDH6-205ENST00000514738 IRX3P78415 501 aaPredicted RBP21.2■□□□□ 0.98
CDH6-205ENST00000514738 TNNT2P45379 298 aaPredicted RBP21.19■□□□□ 0.98
CDH6-205ENST00000514738 POGKQ9P215 609 aa21.19■□□□□ 0.98
CDH6-205ENST00000514738 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
CDH6-205ENST00000514738 TCERG1O14776 1098 aaKnown RBP21.18■□□□□ 0.98
CDH6-205ENST00000514738 SLC4A3P48751 1232 aa21.16■□□□□ 0.98
CDH6-205ENST00000514738 KIAA1211Q6ZU35 1233 aa21.16■□□□□ 0.98
CDH6-205ENST00000514738 ESPNB1AK53 854 aa21.15■□□□□ 0.98
CDH6-205ENST00000514738 XRCC6P12956 609 aaKnown RBP eCLIP21.15■□□□□ 0.98
CDH6-205ENST00000514738 KIF20AO95235 890 aa21.14■□□□□ 0.98
CDH6-205ENST00000514738 RIPK4P57078 832 aa21.14■□□□□ 0.97
CDH6-205ENST00000514738 ZSCAN20P17040 1043 aaPredicted RBP21.13■□□□□ 0.97
CDH6-205ENST00000514738 CDK11BP21127 795 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms