RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	CCDC61	Q9Y6R9	512 aa		14.43	□□□□□ -0.1
HIPK1-210	ENST00000514621	KLHL34	Q8N239	644 aa		14.38	□□□□□ -0.11
HIPK1-210	ENST00000514621	GALR2	O43603	387 aa	Predicted RBP	14.37	□□□□□ -0.11
HIPK1-210	ENST00000514621	IFNLR1	Q8IU57	520 aa	Predicted RBP	14.35	□□□□□ -0.11
HIPK1-210	ENST00000514621	FAM212A	Q96EL1	285 aa		14.33	□□□□□ -0.12
HIPK1-210	ENST00000514621	POTEI	P0CG38	1075 aa		14.29	□□□□□ -0.12
HIPK1-210	ENST00000514621	KIF12	Q96FN5	646 aa		14.29	□□□□□ -0.12
HIPK1-210	ENST00000514621	MS4A3	Q96HJ5	214 aa		14.29	□□□□□ -0.12
HIPK1-210	ENST00000514621	DCBLD2	Q96PD2	775 aa		14.25	□□□□□ -0.13
HIPK1-210	ENST00000514621	MAP3K13	O43283	966 aa		14.23	□□□□□ -0.13
HIPK1-210	ENST00000514621	DCAF8	Q5TAQ9	597 aa		14.22	□□□□□ -0.13
HIPK1-210	ENST00000514621	SPOCK2	Q92563	424 aa		14.22	□□□□□ -0.13
HIPK1-210	ENST00000514621	GSE1	Q14687	1217 aa		14.16	□□□□□ -0.14
HIPK1-210	ENST00000514621	SGIP1	Q9BQI5	828 aa		14.13	□□□□□ -0.15
HIPK1-210	ENST00000514621	PCDHB13	Q9Y5F0	798 aa		14.13	□□□□□ -0.15
HIPK1-210	ENST00000514621	PYGB	P11216	843 aa		14.12	□□□□□ -0.15
HIPK1-210	ENST00000514621	TRPC6	Q9Y210	931 aa		14.12	□□□□□ -0.15
HIPK1-210	ENST00000514621	ASTL	Q6HA08	431 aa	Predicted RBP	14.1	□□□□□ -0.15
HIPK1-210	ENST00000514621	IFNL1	Q8IU54	200 aa		14.09	□□□□□ -0.15
HIPK1-210	ENST00000514621	ATMIN	O43313	823 aa	Predicted RBP	14.08	□□□□□ -0.16
HIPK1-210	ENST00000514621	PELP1	Q8IZL8	1130 aa	Known RBP	14.06	□□□□□ -0.16
HIPK1-210	ENST00000514621	BMP2K	Q9NSY1	1161 aa	Predicted RBP	14.06	□□□□□ -0.16
HIPK1-210	ENST00000514621	CIZ1	Q9ULV3	898 aa	Predicted RBP	14.06	□□□□□ -0.16
HIPK1-210	ENST00000514621	TIE1	P35590	1138 aa		14.04	□□□□□ -0.16
HIPK1-210	ENST00000514621	CHRM1	P11229	460 aa	Predicted RBP	14.02	□□□□□ -0.17
HIPK1-210	ENST00000514621	ATN1	P54259	1190 aa	Predicted RBP	14.01	□□□□□ -0.17
HIPK1-210	ENST00000514621	TTLL13P	A6NNM8	815 aa		13.99	□□□□□ -0.17
HIPK1-210	ENST00000514621	PCDHB8	Q9UN66	801 aa		13.98	□□□□□ -0.17
HIPK1-210	ENST00000514621	LHX8	Q68G74	356 aa		13.95	□□□□□ -0.18
HIPK1-210	ENST00000514621	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.93	□□□□□ -0.18
HIPK1-210	ENST00000514621	SLC39A7	Q92504	469 aa		13.93	□□□□□ -0.18
HIPK1-210	ENST00000514621	TRIM41	Q8WV44	630 aa		13.92	□□□□□ -0.18
HIPK1-210	ENST00000514621	TMEM106C	Q9BVX2	250 aa		13.92	□□□□□ -0.18
HIPK1-210	ENST00000514621	METRN	Q9UJH8	293 aa		13.92	□□□□□ -0.18
HIPK1-210	ENST00000514621	C7	P10643	843 aa		13.9	□□□□□ -0.18
HIPK1-210	ENST00000514621	TRIM35	Q9UPQ4	493 aa		13.89	□□□□□ -0.19
HIPK1-210	ENST00000514621	POTEB2	H3BUK9	544 aa		13.83	□□□□□ -0.2
HIPK1-210	ENST00000514621	POTEF	A5A3E0	1075 aa		13.8	□□□□□ -0.2
HIPK1-210	ENST00000514621	PSEN1	P49768	467 aa		13.8	□□□□□ -0.2
HIPK1-210	ENST00000514621	IER5L	Q5T953	404 aa		13.8	□□□□□ -0.2
HIPK1-210	ENST00000514621	PDAP1	Q13442	181 aa	Known RBP	13.79	□□□□□ -0.2
HIPK1-210	ENST00000514621	RNF25	Q96BH1	459 aa	Predicted RBP	13.77	□□□□□ -0.21
HIPK1-210	ENST00000514621	COLQ	Q9Y215	455 aa	Predicted RBP	13.76	□□□□□ -0.21
HIPK1-210	ENST00000514621	ECM2	O94769	699 aa	Predicted RBP	13.74	□□□□□ -0.21
HIPK1-210	ENST00000514621	PKD2	Q13563	968 aa		13.74	□□□□□ -0.21
HIPK1-210	ENST00000514621	CCDC180	Q9P1Z9	1646 aa		13.73	□□□□□ -0.21
HIPK1-210	ENST00000514621	RIOK3	O14730	519 aa	Known RBP	13.72	□□□□□ -0.21
HIPK1-210	ENST00000514621	SEC24B	O95487	1268 aa		13.72	□□□□□ -0.21
HIPK1-210	ENST00000514621	POTEJ	P0CG39	1038 aa		13.71	□□□□□ -0.21
HIPK1-210	ENST00000514621	IRX5	P78411	483 aa	Predicted RBP	13.69	□□□□□ -0.22
HIPK1-210	ENST00000514621	OTUD5	Q96G74	571 aa		13.68	□□□□□ -0.22
HIPK1-210	ENST00000514621	PLCG2	P16885	1265 aa		13.65	□□□□□ -0.22
HIPK1-210	ENST00000514621	GOLGA2	Q08379	1002 aa		13.65	□□□□□ -0.22
HIPK1-210	ENST00000514621	CABP2	Q9NPB3	220 aa		13.64	□□□□□ -0.23
HIPK1-210	ENST00000514621	VGF	O15240	615 aa	Predicted RBP	13.63	□□□□□ -0.23
HIPK1-210	ENST00000514621	MKRN3	Q13064	507 aa	Known RBP	13.63	□□□□□ -0.23
HIPK1-210	ENST00000514621	TAOK2	Q9UL54	1235 aa		13.63	□□□□□ -0.23
HIPK1-210	ENST00000514621	OCEL1	Q9H607	264 aa		13.62	□□□□□ -0.23
HIPK1-210	ENST00000514621	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.6	□□□□□ -0.23
HIPK1-210	ENST00000514621	ZFP91	Q96JP5	570 aa	Predicted RBP	13.6	□□□□□ -0.23
HIPK1-210	ENST00000514621	RGL2	O15211	777 aa		13.59	□□□□□ -0.23
HIPK1-210	ENST00000514621	MAMSTR	Q6ZN01	415 aa		13.59	□□□□□ -0.23
HIPK1-210	ENST00000514621	PDCD7	Q8N8D1	485 aa	Known RBP	13.58	□□□□□ -0.24
HIPK1-210	ENST00000514621	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.55	□□□□□ -0.24
HIPK1-210	ENST00000514621	ILDR1	Q86SU0	546 aa	Predicted RBP	13.55	□□□□□ -0.24
HIPK1-210	ENST00000514621	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
HIPK1-210	ENST00000514621	SCUBE2	Q9NQ36	999 aa		13.54	□□□□□ -0.24
HIPK1-210	ENST00000514621	EFCAB3	Q8N7B9	438 aa		13.52	□□□□□ -0.25
HIPK1-210	ENST00000514621	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.49	□□□□□ -0.25
HIPK1-210	ENST00000514621	STK25	O00506	426 aa		13.44	□□□□□ -0.26
HIPK1-210	ENST00000514621	DPY19L2	Q6NUT2	758 aa		13.44	□□□□□ -0.26
HIPK1-210	ENST00000514621	STK24	Q9Y6E0	443 aa		13.44	□□□□□ -0.26
HIPK1-210	ENST00000514621	RTN4	Q9NQC3	1192 aa	Known RBP	13.43	□□□□□ -0.26
HIPK1-210	ENST00000514621	SOX12	O15370	315 aa		13.41	□□□□□ -0.26
HIPK1-210	ENST00000514621	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.41	□□□□□ -0.26
HIPK1-210	ENST00000514621	ABCC9	O60706	1549 aa		13.4	□□□□□ -0.26
HIPK1-210	ENST00000514621	PHF8	Q9UPP1	1060 aa		13.38	□□□□□ -0.27
HIPK1-210	ENST00000514621	SLAIN1	Q8ND83	568 aa		13.36	□□□□□ -0.27
HIPK1-210	ENST00000514621	MS4A4A	Q96JQ5	239 aa		13.36	□□□□□ -0.27
HIPK1-210	ENST00000514621	DCAF8L2	P0C7V8	631 aa		13.34	□□□□□ -0.27
HIPK1-210	ENST00000514621	C3orf67	Q6ZVT6	689 aa		13.34	□□□□□ -0.27
HIPK1-210	ENST00000514621	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.34	□□□□□ -0.27
HIPK1-210	ENST00000514621	BOLA1	Q9Y3E2	137 aa		13.34	□□□□□ -0.27
HIPK1-210	ENST00000514621	HS6ST3	Q8IZP7	471 aa		13.33	□□□□□ -0.28
HIPK1-210	ENST00000514621	CHGA	P10645	457 aa	Known RBP	13.32	□□□□□ -0.28
HIPK1-210	ENST00000514621	FBXO22	Q8NEZ5	403 aa		13.32	□□□□□ -0.28
HIPK1-210	ENST00000514621	MFRP	Q9BY79	579 aa		13.31	□□□□□ -0.28
HIPK1-210	ENST00000514621	NLRP6	P59044	892 aa		13.3	□□□□□ -0.28
HIPK1-210	ENST00000514621	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.29	□□□□□ -0.28
HIPK1-210	ENST00000514621		G3V3G9	751 aa		13.28	□□□□□ -0.28
HIPK1-210	ENST00000514621	MICALL2	Q8IY33	904 aa		13.25	□□□□□ -0.29
HIPK1-210	ENST00000514621	LCE2D	Q5TA82	110 aa	Predicted RBP	13.24	□□□□□ -0.29
HIPK1-210	ENST00000514621	FAM163A	Q96GL9	167 aa	Predicted RBP	13.2	□□□□□ -0.3
HIPK1-210	ENST00000514621	DNAJC5	Q9H3Z4	198 aa		13.2	□□□□□ -0.3
HIPK1-210	ENST00000514621	NKX1-1	Q15270	411 aa	Predicted RBP	13.14	□□□□□ -0.31
HIPK1-210	ENST00000514621	TMEM92	Q6UXU6	159 aa		13.13	□□□□□ -0.31
HIPK1-210	ENST00000514621	SNPH	O15079	494 aa		13.12	□□□□□ -0.31
HIPK1-210	ENST00000514621	POTEM	A6NI47	508 aa		13.11	□□□□□ -0.31
HIPK1-210	ENST00000514621	RYDEN	Q9NUL5	291 aa	Known RBP	13.11	□□□□□ -0.31
HIPK1-210	ENST00000514621	ST18	O60284	1047 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms