RNA–Protein interactions for RNA: ENST00000514603.1

GYPA-210, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-210ENST00000514603 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
GYPA-210ENST00000514603 GSE1Q14687 1217 aa12.05□□□□□ -0.48
GYPA-210ENST00000514603 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
GYPA-210ENST00000514603 GABBR2O75899 941 aa12□□□□□ -0.49
GYPA-210ENST00000514603 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
GYPA-210ENST00000514603 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
GYPA-210ENST00000514603 RGL2O15211 777 aa11.93□□□□□ -0.5
GYPA-210ENST00000514603 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
GYPA-210ENST00000514603 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
GYPA-210ENST00000514603 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
GYPA-210ENST00000514603 PYGBP11216 843 aa11.9□□□□□ -0.5
GYPA-210ENST00000514603 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
GYPA-210ENST00000514603 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
GYPA-210ENST00000514603 ZRANB1Q9UGI0 708 aa11.87□□□□□ -0.51
GYPA-210ENST00000514603 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
GYPA-210ENST00000514603 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
GYPA-210ENST00000514603 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
GYPA-210ENST00000514603 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
GYPA-210ENST00000514603 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
GYPA-210ENST00000514603 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
GYPA-210ENST00000514603 MAP3K13O43283 966 aa11.75□□□□□ -0.53
GYPA-210ENST00000514603 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
GYPA-210ENST00000514603 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
GYPA-210ENST00000514603 PCDHB13Q9Y5F0 798 aa11.73□□□□□ -0.53
GYPA-210ENST00000514603 POTEMA6NI47 508 aa11.72□□□□□ -0.53
GYPA-210ENST00000514603 ZNF467Q7Z7K2 595 aaPredicted RBP11.72□□□□□ -0.53
GYPA-210ENST00000514603 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
GYPA-210ENST00000514603 CHGAP10645 457 aaKnown RBP11.7□□□□□ -0.54
GYPA-210ENST00000514603 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
GYPA-210ENST00000514603 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
GYPA-210ENST00000514603 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
GYPA-210ENST00000514603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.66□□□□□ -0.54
GYPA-210ENST00000514603 ZFP91Q96JP5 570 aaPredicted RBP11.66□□□□□ -0.54
GYPA-210ENST00000514603 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
GYPA-210ENST00000514603 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.54
GYPA-210ENST00000514603 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
GYPA-210ENST00000514603 STK25O00506 426 aa11.64□□□□□ -0.55
GYPA-210ENST00000514603 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
GYPA-210ENST00000514603 PSEN1P49768 467 aa11.61□□□□□ -0.55
GYPA-210ENST00000514603 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
GYPA-210ENST00000514603 BBXQ8WY36 941 aaPredicted RBP11.59□□□□□ -0.55
GYPA-210ENST00000514603 STK24Q9Y6E0 443 aa11.59□□□□□ -0.55
GYPA-210ENST00000514603 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
GYPA-210ENST00000514603 TRPC6Q9Y210 931 aa11.58□□□□□ -0.56
GYPA-210ENST00000514603 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
GYPA-210ENST00000514603 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
GYPA-210ENST00000514603 CLCN6P51797 869 aa11.52□□□□□ -0.57
GYPA-210ENST00000514603 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
GYPA-210ENST00000514603 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
GYPA-210ENST00000514603 DNAJC5Q9H3Z4 198 aa11.51□□□□□ -0.57
GYPA-210ENST00000514603 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
GYPA-210ENST00000514603 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
GYPA-210ENST00000514603 TIE1P35590 1138 aa11.47□□□□□ -0.57
GYPA-210ENST00000514603 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
GYPA-210ENST00000514603 BMP2KQ9NSY1 1161 aaPredicted RBP11.47□□□□□ -0.57
GYPA-210ENST00000514603 TTLL13PA6NNM8 815 aa11.46□□□□□ -0.57
GYPA-210ENST00000514603 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
GYPA-210ENST00000514603 PCDH10Q9P2E7 1040 aa11.46□□□□□ -0.57
GYPA-210ENST00000514603 SLC24A1O60721 1099 aa11.44□□□□□ -0.58
GYPA-210ENST00000514603 SPRYD3Q8NCJ5 442 aa11.43□□□□□ -0.58
GYPA-210ENST00000514603 EFCAB3Q8N7B9 438 aa11.42□□□□□ -0.58
GYPA-210ENST00000514603 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
GYPA-210ENST00000514603 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
GYPA-210ENST00000514603 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
GYPA-210ENST00000514603 ATN1P54259 1190 aaPredicted RBP11.38□□□□□ -0.59
GYPA-210ENST00000514603 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
GYPA-210ENST00000514603 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
GYPA-210ENST00000514603 ATMINO43313 823 aaPredicted RBP11.37□□□□□ -0.59
GYPA-210ENST00000514603 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
GYPA-210ENST00000514603 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
GYPA-210ENST00000514603 HAP1P54257 671 aaPredicted RBP11.35□□□□□ -0.59
GYPA-210ENST00000514603 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
GYPA-210ENST00000514603 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
GYPA-210ENST00000514603 SOX12O15370 315 aa11.34□□□□□ -0.59
GYPA-210ENST00000514603 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
GYPA-210ENST00000514603 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
GYPA-210ENST00000514603 NLRP6P59044 892 aa11.31□□□□□ -0.6
GYPA-210ENST00000514603 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
GYPA-210ENST00000514603 MS4A4AQ96JQ5 239 aa11.27□□□□□ -0.61
GYPA-210ENST00000514603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.61
GYPA-210ENST00000514603 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
GYPA-210ENST00000514603 PPP1R37O75864 691 aa11.24□□□□□ -0.61
GYPA-210ENST00000514603 IER5LQ5T953 404 aa11.23□□□□□ -0.61
GYPA-210ENST00000514603 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
GYPA-210ENST00000514603 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
GYPA-210ENST00000514603 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
GYPA-210ENST00000514603 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
GYPA-210ENST00000514603 SLC39A7Q92504 469 aa11.19□□□□□ -0.62
GYPA-210ENST00000514603 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
GYPA-210ENST00000514603 PLCG2P16885 1265 aa11.17□□□□□ -0.62
GYPA-210ENST00000514603 DPY19L2Q6NUT2 758 aa11.17□□□□□ -0.62
GYPA-210ENST00000514603 METRNQ9UJH8 293 aa11.17□□□□□ -0.62
GYPA-210ENST00000514603 SEC24BO95487 1268 aa11.16□□□□□ -0.62
GYPA-210ENST00000514603 COLQQ9Y215 455 aaPredicted RBP11.16□□□□□ -0.62
GYPA-210ENST00000514603 C7P10643 843 aa11.15□□□□□ -0.62
GYPA-210ENST00000514603 POTEFA5A3E0 1075 aa11.13□□□□□ -0.63
GYPA-210ENST00000514603 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
GYPA-210ENST00000514603 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
GYPA-210ENST00000514603 KDM2AQ9Y2K7 1162 aa11.12□□□□□ -0.63
GYPA-210ENST00000514603 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms