RNA–Protein interactions for RNA: ENST00000514362.5

SEC31A-239, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-239ENST00000514362 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
SEC31A-239ENST00000514362 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
SEC31A-239ENST00000514362 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
SEC31A-239ENST00000514362 PHF12Q96QT6 1004 aa12.8□□□□□ -0.36
SEC31A-239ENST00000514362 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
SEC31A-239ENST00000514362 NUBP1P53384 320 aa12.74□□□□□ -0.37
SEC31A-239ENST00000514362 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
SEC31A-239ENST00000514362 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
SEC31A-239ENST00000514362 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
SEC31A-239ENST00000514362 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
SEC31A-239ENST00000514362 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
SEC31A-239ENST00000514362 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
SEC31A-239ENST00000514362 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
SEC31A-239ENST00000514362 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
SEC31A-239ENST00000514362 MS4A3Q96HJ5 214 aa12.64□□□□□ -0.39
SEC31A-239ENST00000514362 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
SEC31A-239ENST00000514362 GSE1Q14687 1217 aa12.6□□□□□ -0.39
SEC31A-239ENST00000514362 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
SEC31A-239ENST00000514362 C7P10643 843 aa12.59□□□□□ -0.39
SEC31A-239ENST00000514362 SLC39A7Q92504 469 aa12.59□□□□□ -0.39
SEC31A-239ENST00000514362 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
SEC31A-239ENST00000514362 POTEMA6NI47 508 aa12.58□□□□□ -0.4
SEC31A-239ENST00000514362 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
SEC31A-239ENST00000514362 MAP3K13O43283 966 aa12.54□□□□□ -0.4
SEC31A-239ENST00000514362 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
SEC31A-239ENST00000514362 POTEGQ6S5H5 508 aa12.53□□□□□ -0.4
SEC31A-239ENST00000514362 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
SEC31A-239ENST00000514362 PYGBP11216 843 aa12.5□□□□□ -0.41
SEC31A-239ENST00000514362 SGIP1Q9BQI5 828 aa12.5□□□□□ -0.41
SEC31A-239ENST00000514362 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
SEC31A-239ENST00000514362 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
SEC31A-239ENST00000514362 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
SEC31A-239ENST00000514362 LCE2DQ5TA82 110 aaPredicted RBP12.42□□□□□ -0.42
SEC31A-239ENST00000514362 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
SEC31A-239ENST00000514362 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
SEC31A-239ENST00000514362 IFNL1Q8IU54 200 aa12.41□□□□□ -0.42
SEC31A-239ENST00000514362 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
SEC31A-239ENST00000514362 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
SEC31A-239ENST00000514362 TIE1P35590 1138 aa12.38□□□□□ -0.43
SEC31A-239ENST00000514362 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
SEC31A-239ENST00000514362 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
SEC31A-239ENST00000514362 ZNF467Q7Z7K2 595 aaPredicted RBP12.36□□□□□ -0.43
SEC31A-239ENST00000514362 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
SEC31A-239ENST00000514362 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
SEC31A-239ENST00000514362 TMEM106CQ9BVX2 250 aa12.3□□□□□ -0.44
SEC31A-239ENST00000514362 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
SEC31A-239ENST00000514362 COLQQ9Y215 455 aaPredicted RBP12.26□□□□□ -0.45
SEC31A-239ENST00000514362 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
SEC31A-239ENST00000514362 IER5LQ5T953 404 aa12.23□□□□□ -0.45
SEC31A-239ENST00000514362 PSEN1P49768 467 aa12.22□□□□□ -0.45
SEC31A-239ENST00000514362 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
SEC31A-239ENST00000514362 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
SEC31A-239ENST00000514362 SEC24BO95487 1268 aa12.2□□□□□ -0.46
SEC31A-239ENST00000514362 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
SEC31A-239ENST00000514362 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
SEC31A-239ENST00000514362 PKD2Q13563 968 aa12.15□□□□□ -0.46
SEC31A-239ENST00000514362 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
SEC31A-239ENST00000514362 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
SEC31A-239ENST00000514362 VGFO15240 615 aaPredicted RBP12.11□□□□□ -0.47
SEC31A-239ENST00000514362 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
SEC31A-239ENST00000514362 PLCG2P16885 1265 aa12.08□□□□□ -0.48
SEC31A-239ENST00000514362 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
SEC31A-239ENST00000514362 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
SEC31A-239ENST00000514362 OCEL1Q9H607 264 aa12.05□□□□□ -0.48
SEC31A-239ENST00000514362 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
SEC31A-239ENST00000514362 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
SEC31A-239ENST00000514362 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
SEC31A-239ENST00000514362 RGL2O15211 777 aa12.03□□□□□ -0.48
SEC31A-239ENST00000514362 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
SEC31A-239ENST00000514362 ST18O60284 1047 aa12.02□□□□□ -0.49
SEC31A-239ENST00000514362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.01□□□□□ -0.49
SEC31A-239ENST00000514362 STK25O00506 426 aa11.97□□□□□ -0.49
SEC31A-239ENST00000514362 EFCAB3Q8N7B9 438 aa11.96□□□□□ -0.49
SEC31A-239ENST00000514362 BCL11BQ9C0K0 894 aaPredicted RBP11.96□□□□□ -0.49
SEC31A-239ENST00000514362 STK24Q9Y6E0 443 aa11.96□□□□□ -0.49
SEC31A-239ENST00000514362 SOX12O15370 315 aa11.91□□□□□ -0.5
SEC31A-239ENST00000514362 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
SEC31A-239ENST00000514362 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
SEC31A-239ENST00000514362 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
SEC31A-239ENST00000514362 G3V3G9 751 aa11.88□□□□□ -0.51
SEC31A-239ENST00000514362 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
SEC31A-239ENST00000514362 SNPHO15079 494 aa11.85□□□□□ -0.51
SEC31A-239ENST00000514362 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.84□□□□□ -0.51
SEC31A-239ENST00000514362 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
SEC31A-239ENST00000514362 CHGAP10645 457 aaKnown RBP11.83□□□□□ -0.52
SEC31A-239ENST00000514362 NLRP6P59044 892 aa11.83□□□□□ -0.52
SEC31A-239ENST00000514362 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
SEC31A-239ENST00000514362 DPY19L2Q6NUT2 758 aa11.83□□□□□ -0.52
SEC31A-239ENST00000514362 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
SEC31A-239ENST00000514362 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
SEC31A-239ENST00000514362 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
SEC31A-239ENST00000514362 MMRN1Q13201 1228 aa11.79□□□□□ -0.52
SEC31A-239ENST00000514362 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
SEC31A-239ENST00000514362 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
SEC31A-239ENST00000514362 MFRPQ9BY79 579 aa11.75□□□□□ -0.53
SEC31A-239ENST00000514362 MARVELD3Q96A59 401 aa11.74□□□□□ -0.53
SEC31A-239ENST00000514362 MS4A4AQ96JQ5 239 aa11.74□□□□□ -0.53
SEC31A-239ENST00000514362 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
SEC31A-239ENST00000514362 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.53
SEC31A-239ENST00000514362 MICALL2Q8IY33 904 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms