RNA–Protein interactions for RNA: ENST00000514279.5

AFP-206, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-206ENST00000514279 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
AFP-206ENST00000514279 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
AFP-206ENST00000514279 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
AFP-206ENST00000514279 C7P10643 843 aa12.83□□□□□ -0.36
AFP-206ENST00000514279 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
AFP-206ENST00000514279 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
AFP-206ENST00000514279 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
AFP-206ENST00000514279 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
AFP-206ENST00000514279 ABCC9O60706 1549 aa12.77□□□□□ -0.37
AFP-206ENST00000514279 SCUBE2Q9NQ36 999 aa12.75□□□□□ -0.37
AFP-206ENST00000514279 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
AFP-206ENST00000514279 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
AFP-206ENST00000514279 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
AFP-206ENST00000514279 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
AFP-206ENST00000514279 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
AFP-206ENST00000514279 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
AFP-206ENST00000514279 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
AFP-206ENST00000514279 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
AFP-206ENST00000514279 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
AFP-206ENST00000514279 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
AFP-206ENST00000514279 PROM2Q8N271 834 aa12.4□□□□□ -0.42
AFP-206ENST00000514279 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
AFP-206ENST00000514279 ST18O60284 1047 aa12.39□□□□□ -0.43
AFP-206ENST00000514279 DCAF8L2P0C7V8 631 aa12.39□□□□□ -0.43
AFP-206ENST00000514279 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
AFP-206ENST00000514279 COLQQ9Y215 455 aaPredicted RBP12.39□□□□□ -0.43
AFP-206ENST00000514279 SEC24BO95487 1268 aa12.37□□□□□ -0.43
AFP-206ENST00000514279 TIE1P35590 1138 aa12.37□□□□□ -0.43
AFP-206ENST00000514279 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
AFP-206ENST00000514279 SLAIN1Q8ND83 568 aa12.31□□□□□ -0.44
AFP-206ENST00000514279 MAP3K13O43283 966 aa12.29□□□□□ -0.44
AFP-206ENST00000514279 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
AFP-206ENST00000514279 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
AFP-206ENST00000514279 MIER1Q8N108 512 aa12.26□□□□□ -0.45
AFP-206ENST00000514279 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
AFP-206ENST00000514279 NACADO15069 1562 aa12.24□□□□□ -0.45
AFP-206ENST00000514279 IER5LQ5T953 404 aa12.24□□□□□ -0.45
AFP-206ENST00000514279 TRIM35Q9UPQ4 493 aa12.21□□□□□ -0.45
AFP-206ENST00000514279 TMEM121BQ9BXQ6 578 aaPredicted RBP12.2□□□□□ -0.46
AFP-206ENST00000514279 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
AFP-206ENST00000514279 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
AFP-206ENST00000514279 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
AFP-206ENST00000514279 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
AFP-206ENST00000514279 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.47
AFP-206ENST00000514279 SNPHO15079 494 aa12.08□□□□□ -0.48
AFP-206ENST00000514279 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
AFP-206ENST00000514279 PLCG2P16885 1265 aa12.07□□□□□ -0.48
AFP-206ENST00000514279 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
AFP-206ENST00000514279 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
AFP-206ENST00000514279 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
AFP-206ENST00000514279 FKBP8Q14318 412 aa12.02□□□□□ -0.49
AFP-206ENST00000514279 NUBP1P53384 320 aa12□□□□□ -0.49
AFP-206ENST00000514279 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
AFP-206ENST00000514279 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
AFP-206ENST00000514279 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
AFP-206ENST00000514279 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
AFP-206ENST00000514279 KRTAP3-2Q9BYR7 98 aa11.96□□□□□ -0.49
AFP-206ENST00000514279 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
AFP-206ENST00000514279 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
AFP-206ENST00000514279 EMP3P54852 163 aa11.94□□□□□ -0.5
AFP-206ENST00000514279 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
AFP-206ENST00000514279 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
AFP-206ENST00000514279 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
AFP-206ENST00000514279 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
AFP-206ENST00000514279 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
AFP-206ENST00000514279 DCAF8Q5TAQ9 597 aa11.84□□□□□ -0.51
AFP-206ENST00000514279 PYGBP11216 843 aa11.82□□□□□ -0.52
AFP-206ENST00000514279 UNC13AQ9UPW8 1703 aa11.81□□□□□ -0.52
AFP-206ENST00000514279 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
AFP-206ENST00000514279 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
AFP-206ENST00000514279 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
AFP-206ENST00000514279 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
AFP-206ENST00000514279 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
AFP-206ENST00000514279 PCDHB8Q9UN66 801 aa11.74□□□□□ -0.53
AFP-206ENST00000514279 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
AFP-206ENST00000514279 RNF166Q96A37 237 aaPredicted RBP11.7□□□□□ -0.54
AFP-206ENST00000514279 PDCD7Q8N8D1 485 aaKnown RBP11.68□□□□□ -0.54
AFP-206ENST00000514279 VASPP50552 380 aaPredicted RBP11.67□□□□□ -0.54
AFP-206ENST00000514279 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
AFP-206ENST00000514279 GSE1Q14687 1217 aa11.63□□□□□ -0.55
AFP-206ENST00000514279 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
AFP-206ENST00000514279 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
AFP-206ENST00000514279 MYT1LQ9UL68 1186 aa11.57□□□□□ -0.56
AFP-206ENST00000514279 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
AFP-206ENST00000514279 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
AFP-206ENST00000514279 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
AFP-206ENST00000514279 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
AFP-206ENST00000514279 ERBB3P21860 1342 aa11.53□□□□□ -0.56
AFP-206ENST00000514279 PSEN1P49768 467 aa11.52□□□□□ -0.57
AFP-206ENST00000514279 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
AFP-206ENST00000514279 CECR2Q9BXF3 1484 aa11.51□□□□□ -0.57
AFP-206ENST00000514279 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
AFP-206ENST00000514279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.5□□□□□ -0.571e-323■□□□□ 9.1
AFP-206ENST00000514279 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
AFP-206ENST00000514279 CIZ1Q9ULV3 898 aaPredicted RBP11.47□□□□□ -0.57
AFP-206ENST00000514279 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
AFP-206ENST00000514279 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
AFP-206ENST00000514279 VARS2Q5ST30 1063 aaKnown RBP11.43□□□□□ -0.58
AFP-206ENST00000514279 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
AFP-206ENST00000514279 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms